Factsheet for Bra015404.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 5
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra024839.1-P
Bra024840.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G05260.1	Bra024839.1-P	AT2G01950.1	19000166
AT1G05260.1	Bra024840.1-P	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY46845	Canola	extracellular	99.69	99.69
CDY49518	Canola	extracellular	96.63	96.63
Bra032474.1-P	Field mustard	extracellular	83.74	95.12
AT1G05260.1	Thale cress	extracellular	91.72	91.72
Bra031309.1-P	Field mustard	extracellular	72.7	72.7
KRH22535	Soybean	extracellular	68.4	68.83
Bra035235.1-P	Field mustard	extracellular	68.4	68.4
KRH26821	Soybean	endoplasmic reticulum	68.1	68.1
Bra023862.1-P	Field mustard	vacuole	68.71	68.09
KRH22534	Soybean	extracellular	67.79	67.79
Solyc07g052530.2.1	Tomato	extracellular	68.4	67.78
PGSC0003DMT400065517	Potato	extracellular	68.4	67.78
PGSC0003DMT400065516	Potato	extracellular	68.4	67.78
Solyc07g052540.2.1	Tomato	extracellular	68.4	67.78
Solyc07g049240.2.1	Tomato	extracellular	68.4	67.37
PGSC0003DMT400013504	Potato	extracellular	67.48	67.28
KRH26822	Soybean	endoplasmic reticulum	67.18	67.18
Solyc07g047740.2.1	Tomato	extracellular	68.1	67.07
PGSC0003DMT400038889	Potato	extracellular	67.18	66.97
Solyc07g052510.2.1	Tomato	extracellular	67.18	66.77
PGSC0003DMT400065518	Potato	extracellular	66.87	66.46
Solyc05g046010.2.1	Tomato	extracellular	66.56	66.36
PGSC0003DMT400013520	Potato	extracellular	66.56	66.36
Solyc05g046020.2.1	Tomato	extracellular	66.56	66.36
PGSC0003DMT400001848	Potato	extracellular	66.87	65.86
Solyc05g046030.2.1	Tomato	extracellular	65.95	65.75
Solyc07g052550.1.1	Tomato	extracellular	65.95	65.35
KRH56093	Soybean	extracellular	63.8	64.0
KRH25412	Soybean	extracellular	61.96	62.35
Solyc04g056420.1.1	Tomato	extracellular	51.84	61.9
KRH56092	Soybean	extracellular, mitochondrion	61.35	61.73
GSMUA_Achr9P30170_001	Banana	extracellular	55.52	61.15
EER88826	Sorghum	extracellular	60.12	59.21
TraesCS7D01G442300.1	Wheat	extracellular	59.2	58.13
GSMUA_Achr2P03020_001	Banana	extracellular	53.99	57.89
TraesCS7B01G353200.1	Wheat	extracellular	58.59	57.7
TraesCS7A01G453000.1	Wheat	extracellular	58.28	57.4
HORVU7Hr1G102480.7	Barley	extracellular	59.51	57.4
Bra021488.1-P	Field mustard	extracellular, golgi	54.91	56.11
Os06t0681600-01	Rice	extracellular	57.67	55.79
Bra039137.1-P	Field mustard	extracellular	53.99	55.17
TraesCS7A01G452900.1	Wheat	extracellular	56.13	55.12
TraesCS7D01G442200.1	Wheat	extracellular	55.83	54.82
Zm00001d014467_P002	Maize	vacuole	59.2	53.46
KRH25410	Soybean	cytosol	38.96	51.63
TraesCS6A01G136500.1	Wheat	extracellular	51.53	51.38
Bra023509.1-P	Field mustard	extracellular	50.92	50.3
Bra032476.1-P	Field mustard	extracellular	48.77	49.69
TraesCS7B01G353100.1	Wheat	extracellular	55.83	49.59
TraesCS6B01G164400.2	Wheat	extracellular	51.84	49.27
Os02t0161800-01	Rice	extracellular, mitochondrion	52.45	49.14
TraesCS6D01G125500.1	Wheat	extracellular	51.23	48.55
EES06321	Sorghum	extracellular, golgi, plastid	51.84	48.01
Bra015403.1-P	Field mustard	extracellular	46.63	47.5
Bra030607.1-P	Field mustard	extracellular	48.16	47.29
HORVU6Hr1G026230.5	Barley	extracellular	49.69	47.09
Bra032477.1-P	Field mustard	extracellular	45.71	46.42
Bra015402.1-P	Field mustard	extracellular	45.09	45.79
Bra030606.1-P	Field mustard	extracellular	46.63	44.71
Bra028436.1-P	Field mustard	extracellular	43.56	44.65
Zm00001d053839_P001	Maize	extracellular	30.37	44.59
Bra032475.1-P	Field mustard	extracellular	43.56	44.51
Bra024269.1-P	Field mustard	extracellular	43.56	43.29
Bra013938.1-P	Field mustard	extracellular	43.25	43.25
Bra016930.1-P	Field mustard	extracellular	42.64	42.64
Bra031933.1-P	Field mustard	extracellular	41.72	42.63
Bra000228.1-P	Field mustard	extracellular	42.64	42.51
Bra000113.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi	46.63	42.22
Bra008291.1-P	Field mustard	extracellular	40.49	41.38
Bra031934.1-P	Field mustard	extracellular, golgi	41.41	40.54
Bra024267.1-P	Field mustard	extracellular	41.1	40.12
Bra015695.1-P	Field mustard	extracellular, golgi	41.1	39.76
Bra024268.1-P	Field mustard	extracellular	39.88	39.04
PGSC0003DMT400001851	Potato	extracellular	66.26	36.49

Protein Annotations

KEGG:00940+1.11.1.7	Gene3D:1.10.420.10	Gene3D:1.10.520.10	MapMan:35.1	EnsemblPlantsGene:Bra015404	EnsemblPlants:Bra015404.1
EnsemblPlants:Bra015404.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0004601	GO:GO:0005488	GO:GO:0005575
GO:GO:0005576	GO:GO:0006950	GO:GO:0006979	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009987	GO:GO:0016491	GO:GO:0020037	GO:GO:0042744	GO:GO:0046872	GO:GO:0055114
GO:GO:0098869	InterPro:Haem_peroxidase	InterPro:Haem_peroxidase_pln/fun/bac	InterPro:IPR002016	UniProt:M4DFY1	PFAM:PF00141
PRINTS:PR00458	PRINTS:PR00461	ScanProsite:PS00435	ScanProsite:PS00436	PFscan:PS50873	PANTHER:PTHR31235
PANTHER:PTHR31235:SF39	InterPro:Peroxidase_pln	InterPro:Peroxidases_AS	InterPro:Peroxidases_heam-ligand_BS	SUPFAM:SSF48113	InterPro:Secretory_peroxidase
SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0002543906	SEG:seg	:	:

Description

AT1G05260 (E=3e-168) RCI3, RCI3A | RCI3 (RARE COLD INDUCIBLE GENE 3); peroxidase

Coordinates

chrA10:-:2051392..2052817

Molecular Weight (calculated)

34995.8 Da

IEP (calculated)

8.486

GRAVY (calculated)

-0.024

Length

326 amino acids

Sequence
(BLAST)

001: MRCLTTVALS LSLFLVGLVG PIQAQLQMNF YANTCPNAEK IVQDFVSNHI SNAPSLAAAL LRMHFHDCFV RGCDGSVLIN STSGNAEKDA APNLTVRGFG
101: FIEAIKAVLE AQCPGIVSCA DIIALASRDA IVFTGGPNWS VPTGRRDGRI SNASEALANI PPPTSNFTNL QTLFANQGLD LKDLVLLSGA HTIGVSHCSS
201: FTNRLYNFTG RGDQDPALDS EYAANLKSRK CPSLKDNTTI VEMDPGSRKT FDLSYYQLLL KRRGLFQSDS ALTTNPTTLS NINQILKGSV AGFFSEFAKS
301: MEKMGRINVK TGSSGVVRKQ CSVANS

Best Arabidopsis Sequence Match ( AT1G05260.1 )
(BLAST)

001: MNCLIAIALS VSFFLVGIVG PIQAQLQMNF YANSCPNAEK IVQDFVSNHV SNAPSLAAAL IRMHFHDCFV RGCDGSVLIN STSGNAERDA TPNLTVRGFG
101: FIDAIKSVLE AQCPGIVSCA DIIALASRDA VVFTGGPNWS VPTGRRDGRI SNAAEALANI PPPTSNITNL QTLFANQGLD LKDLVLLSGA HTIGVSHCSS
201: FTNRLYNFTG RGGQDPALDS EYAANLKSRK CPSLNDNKTI VEMDPGSRKT FDLSYYQLVL KRRGLFQSDS ALTTNPTTLS NINRILTGSV GSFFSEFAKS
301: MEKMGRINVK TGSAGVVRRQ CSVANS

Arabidopsis Description

PER3Peroxidase [Source:UniProtKB/TrEMBL;Acc:Q0WSR2]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.