Factsheet for Solyc04g056420.1.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc04g008430.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G05260.1	Solyc04g008430.1.1	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc07g047740.2.1	Tomato	extracellular	87.55	72.21
Solyc07g049240.2.1	Tomato	extracellular	85.35	70.39
PGSC0003DMT400001848	Potato	extracellular	84.98	70.09
Solyc07g052530.2.1	Tomato	extracellular	73.99	61.4
Solyc07g052540.2.1	Tomato	extracellular	72.89	60.49
Solyc05g046020.2.1	Tomato	extracellular	70.33	58.72
Solyc05g046030.2.1	Tomato	extracellular	70.33	58.72
Solyc07g052510.2.1	Tomato	extracellular	70.33	58.54
Solyc07g052550.1.1	Tomato	extracellular	69.96	58.05
Solyc05g046010.2.1	Tomato	extracellular	68.5	57.19
Bra032474.1-P	Field mustard	extracellular	56.78	54.01
CDY10037	Canola	extracellular	63.0	52.76
CDY59800	Canola	extracellular	63.0	52.76
AT1G05260.1	Thale cress	extracellular	61.9	51.84
CDY46845	Canola	extracellular	61.9	51.84
Bra015404.1-P	Field mustard	extracellular	61.9	51.84
CDY49518	Canola	extracellular	60.81	50.92
KRH56093	Soybean	extracellular	59.71	50.15
CDY55649	Canola	vacuole	60.07	49.85
Bra023862.1-P	Field mustard	vacuole	60.07	49.85
CDY38641	Canola	extracellular	59.34	49.69
Bra031309.1-P	Field mustard	extracellular	59.34	49.69
KRH22534	Soybean	extracellular	59.34	49.69
KRH26821	Soybean	endoplasmic reticulum	59.34	49.69
CDY19299	Canola	vacuole	59.71	49.54
KRH26822	Soybean	endoplasmic reticulum	58.97	49.39
KRH22535	Soybean	extracellular	58.61	49.38
CDY13252	Canola	extracellular	58.61	49.08
CDX86795	Canola	extracellular	58.61	49.08
Bra035235.1-P	Field mustard	extracellular	58.61	49.08
AT3G21770.1	Thale cress	extracellular	58.97	48.94
GSMUA_Achr2P03020_001	Banana	extracellular	53.48	48.03
KRH25410	Soybean	cytosol	43.22	47.97
KRH56092	Soybean	extracellular, mitochondrion	56.41	47.53
KRH25412	Soybean	extracellular	56.04	47.22
EER88826	Sorghum	extracellular	56.78	46.83
AT4G11290.1	Thale cress	extracellular	55.31	46.32
CDY33143	Canola	extracellular	59.34	44.38
GSMUA_Achr9P30170_001	Banana	extracellular	47.99	44.26
TraesCS7B01G353200.1	Wheat	extracellular	53.48	44.11
HORVU7Hr1G102480.7	Barley	extracellular	54.21	43.79
TraesCS7D01G442300.1	Wheat	extracellular	53.11	43.67
TraesCS7A01G453000.1	Wheat	extracellular	52.75	43.5
TraesCS7A01G452900.1	Wheat	extracellular	52.38	43.07
Zm00001d014467_P002	Maize	vacuole	56.78	42.94
TraesCS7D01G442200.1	Wheat	extracellular	52.01	42.77
Os06t0681600-01	Rice	extracellular	52.75	42.73
Solyc01g067850.2.1	Tomato	extracellular	49.45	41.67
Solyc05g046000.2.1	Tomato	extracellular	49.08	41.61
Solyc08g075830.2.1	Tomato	extracellular	49.08	41.61
Solyc12g005790.1.1	Tomato	extracellular	49.08	41.36
PGSC0003DMT400001851	Potato	extracellular	86.08	39.7
Solyc12g005370.1.1	Tomato	extracellular	47.62	39.63
TraesCS7B01G353100.1	Wheat	extracellular	52.75	39.24
Os02t0161800-01	Rice	extracellular, mitochondrion	49.08	38.51
TraesCS6A01G136500.1	Wheat	extracellular	45.42	37.92
CDY10042	Canola	extracellular	22.34	37.65
Solyc01g067880.1.1	Tomato	mitochondrion	35.53	37.45
TraesCS6D01G125500.1	Wheat	extracellular	46.89	37.21
TraesCS6B01G164400.2	Wheat	extracellular	46.52	37.03
Solyc01g067860.2.1	Tomato	extracellular	43.96	36.59
HORVU6Hr1G026230.5	Barley	extracellular	45.79	36.34
Solyc01g105070.2.1	Tomato	extracellular	43.59	35.84
Solyc06g054500.1.1	Tomato	extracellular	42.12	35.38
EES06321	Sorghum	extracellular, golgi, plastid	45.42	35.23
Solyc02g064970.2.1	Tomato	extracellular	41.39	34.66
Solyc10g047110.1.1	Tomato	extracellular	34.07	32.52
Solyc01g104860.2.1	Tomato	extracellular	37.73	32.19
Solyc01g067870.2.1	Tomato	extracellular	42.86	31.03
Zm00001d053839_P001	Maize	extracellular	21.98	27.03
Solyc04g064690.2.1	Tomato	extracellular, vacuole	36.63	25.84

Protein Annotations

KEGG:00940+1.11.1.7	Gene3D:1.10.420.10	Gene3D:1.10.520.10	MapMan:35.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004601	GO:GO:0005488	GO:GO:0005575	GO:GO:0005618	GO:GO:0005623	GO:GO:0006950
GO:GO:0006979	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009505	GO:GO:0009506
GO:GO:0009664	GO:GO:0009987	GO:GO:0016043	GO:GO:0016491	GO:GO:0020037	GO:GO:0030312
GO:GO:0042744	GO:GO:0046872	GO:GO:0055114	GO:GO:0098869	InterPro:Haem_peroxidase	InterPro:Haem_peroxidase_pln/fun/bac
InterPro:IPR002016	UniProt:K4BSU0	PFAM:PF00141	PRINTS:PR00458	PFscan:PS50873	PANTHER:PTHR31235
PANTHER:PTHR31235:SF39	SUPFAM:SSF48113	InterPro:Secretory_peroxidase	SignalP:SignalP-noTM	EnsemblPlantsGene:Solyc04g056420.1	EnsemblPlants:Solyc04g056420.1.1
TMHMM:TMhelix	UniParc:UPI0002765C67	:	:	:	:

Description

Peroxidase [Source:UniProtKB/TrEMBL;Acc:K4BSU0]

Coordinates

chr4:+:54198332..54199541

Molecular Weight (calculated)

29547.4 Da

IEP (calculated)

7.634

GRAVY (calculated)

-0.025

Length

273 amino acids

Sequence
(BLAST)

001: MAKYGNLSSF LVLCILLGIV GSTVGQLQLN FYAKSCPQAE KIIQEYVQKQ IPNAPDCIST IGCDGSVLLN FTSKIASVEA ECPGVVSCAD IVALVARDSV
101: VVTPFLFREE VPTGRRDGRT SNASEALANI PPPTSAHTIG VSHCPSFSSR LYNFTGDWGK QDPFLDSKYA ANLKMKKCKS INDNTTIVEM DPGSSSKFDL
201: NYFQLVLRRK GLFQSDAALT TSATTNSFIN QLVQGSLKQF YAEFGLAMEK MGEIEVKTGS VGEIRKHCAA VNS

Best Arabidopsis Sequence Match ( AT1G05260.1 )
(BLAST)

001: MNCLIAIALS VSFFLVGIVG PIQAQLQMNF YANSCPNAEK IVQDFVSNHV SNAPSLAAAL IRMHFHDCFV RGCDGSVLIN STSGNAERDA TPNLTVRGFG
101: FIDAIKSVLE AQCPGIVSCA DIIALASRDA VVFTGGPNWS VPTGRRDGRI SNAAEALANI PPPTSNITNL QTLFANQGLD LKDLVLLSGA HTIGVSHCSS
201: FTNRLYNFTG RGGQDPALDS EYAANLKSRK CPSLNDNKTI VEMDPGSRKT FDLSYYQLVL KRRGLFQSDS ALTTNPTTLS NINRILTGSV GSFFSEFAKS
301: MEKMGRINVK TGSAGVVRRQ CSVANS

Arabidopsis Description

PER3Peroxidase [Source:UniProtKB/TrEMBL;Acc:Q0WSR2]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.