Factsheet for Solyc07g052510.2.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 5
plasma membrane 6
golgi 5
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	extracellular

extracellular: 20496099
nucleus: 28394025

msms PMID: 28394025 doi

AJM Howden, R Stam, V Martinez Heredia, GB Motion, S Ten Have, K Hodge, TM Marques Monteiro Amaro, E Huitema

Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.

msms PMID: 20496099 doi

D Dahal, A Pich, HP Braun, K Wydra

Institute for Plant Diseases and Plant Protection, Faculty of Natural Sciences, Leibniz Universität Hannover, Herrenhäuser Str.2, 30419 Hannover, Germany. dahal@ipp.uni-hannover.de

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc04g008430.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G05260.1	Solyc04g008430.1.1	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400065518	Potato	extracellular	97.26	97.26
Solyc07g052530.2.1	Tomato	extracellular	76.83	76.6
Solyc07g052540.2.1	Tomato	extracellular	76.83	76.6
Solyc05g046020.2.1	Tomato	extracellular	75.91	76.15
Solyc05g046030.2.1	Tomato	extracellular	75.3	75.54
Solyc07g049240.2.1	Tomato	extracellular	75.91	75.23
Solyc07g047740.2.1	Tomato	extracellular	75.3	74.62
Solyc05g046010.2.1	Tomato	extracellular	74.09	74.31
Solyc07g052550.1.1	Tomato	extracellular	73.78	73.56
Solyc04g056420.1.1	Tomato	extracellular	58.54	70.33
CDY10037	Canola	extracellular	67.07	67.48
Bra032474.1-P	Field mustard	extracellular	58.84	67.25
CDY59800	Canola	extracellular	66.77	67.18
CDY46845	Canola	extracellular	66.77	67.18
Bra015404.1-P	Field mustard	extracellular	66.77	67.18
AT1G05260.1	Thale cress	extracellular	66.46	66.87
KRH26821	Soybean	endoplasmic reticulum	66.46	66.87
KRH22535	Soybean	extracellular	65.85	66.67
KRH22534	Soybean	extracellular	66.16	66.56
KRH26822	Soybean	endoplasmic reticulum	65.55	65.95
GSMUA_Achr2P03020_001	Banana	extracellular	60.98	65.79
CDY49518	Canola	extracellular	65.24	65.64
CDY13252	Canola	extracellular	64.02	64.42
KRH56093	Soybean	extracellular	63.72	64.31
CDX86795	Canola	extracellular	63.72	64.11
Bra035235.1-P	Field mustard	extracellular	63.72	64.11
Bra031309.1-P	Field mustard	extracellular	63.11	63.5
CDY38641	Canola	extracellular	63.11	63.5
Bra023862.1-P	Field mustard	vacuole	63.41	63.22
CDY55649	Canola	vacuole	63.41	63.22
AT4G11290.1	Thale cress	extracellular	62.8	63.19
GSMUA_Achr9P30170_001	Banana	extracellular	57.01	63.18
KRH25412	Soybean	extracellular	62.2	62.96
CDY19299	Canola	vacuole	62.8	62.61
KRH56092	Soybean	extracellular, mitochondrion	61.59	62.35
AT3G21770.1	Thale cress	extracellular	62.5	62.31
EER88826	Sorghum	extracellular	62.8	62.24
TraesCS7B01G353200.1	Wheat	extracellular	61.89	61.33
TraesCS7D01G442300.1	Wheat	extracellular	61.59	60.84
TraesCS7A01G453000.1	Wheat	extracellular	60.98	60.42
HORVU7Hr1G102480.7	Barley	extracellular	61.89	60.06
TraesCS7A01G452900.1	Wheat	extracellular	60.67	59.94
TraesCS7D01G442200.1	Wheat	extracellular	59.76	59.04
Os06t0681600-01	Rice	extracellular	60.06	58.46
Zm00001d014467_P002	Maize	vacuole	62.5	56.79
CDY33143	Canola	extracellular	62.8	56.44
Solyc05g046000.2.1	Tomato	extracellular	54.57	55.59
TraesCS6A01G136500.1	Wheat	extracellular	55.18	55.35
Solyc08g075830.2.1	Tomato	extracellular	54.27	55.28
Solyc12g005790.1.1	Tomato	extracellular	54.27	54.94
TraesCS6B01G164400.2	Wheat	extracellular	56.4	53.94
TraesCS7B01G353100.1	Wheat	extracellular	60.06	53.68
TraesCS6D01G125500.1	Wheat	extracellular	56.1	53.49
Os02t0161800-01	Rice	extracellular, mitochondrion	56.4	53.16
Solyc01g067850.2.1	Tomato	extracellular	51.83	52.47
Solyc12g005370.1.1	Tomato	extracellular	52.44	52.44
HORVU6Hr1G026230.5	Barley	extracellular	54.88	52.33
EES06321	Sorghum	extracellular, golgi, plastid	55.79	51.99
CDY10042	Canola	extracellular	25.61	51.85
KRH25410	Soybean	cytosol	38.41	51.22
Solyc01g067880.1.1	Tomato	mitochondrion	38.11	48.26
Solyc01g067860.2.1	Tomato	extracellular	46.95	46.95
Zm00001d053839_P001	Maize	extracellular	31.4	46.4
Solyc02g064970.2.1	Tomato	extracellular	45.12	45.4
Solyc06g054500.1.1	Tomato	extracellular	44.21	44.62
Solyc01g105070.2.1	Tomato	extracellular	44.82	44.28
Solyc01g067870.2.1	Tomato	extracellular	47.26	41.11
Solyc01g104860.2.1	Tomato	extracellular	39.63	40.62
Solyc10g047110.1.1	Tomato	extracellular	34.15	39.16
Solyc04g064690.2.1	Tomato	extracellular, vacuole	38.41	32.56

Protein Annotations

KEGG:00940+1.11.1.7	Gene3D:1.10.420.10	Gene3D:1.10.520.10	MapMan:35.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004601	GO:GO:0005488	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618	GO:GO:0005623
GO:GO:0006950	GO:GO:0006979	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009505
GO:GO:0009506	GO:GO:0009664	GO:GO:0009987	GO:GO:0016043	GO:GO:0016491	GO:GO:0020037
GO:GO:0030312	GO:GO:0042744	GO:GO:0046872	GO:GO:0055114	GO:GO:0098869	InterPro:Haem_peroxidase
InterPro:Haem_peroxidase_pln/fun/bac	InterPro:IPR002016	UniProt:K4CFF0	PFAM:PF00141	PRINTS:PR00458	PRINTS:PR00461
ScanProsite:PS00435	ScanProsite:PS00436	PFscan:PS50873	PANTHER:PTHR31235	PANTHER:PTHR31235:SF39	InterPro:Peroxidase_pln
InterPro:Peroxidases_AS	InterPro:Peroxidases_heam-ligand_BS	SUPFAM:SSF48113	InterPro:Secretory_peroxidase	SignalP:SignalP-noTM	EnsemblPlantsGene:Solyc07g052510.2
EnsemblPlants:Solyc07g052510.2.1	UniParc:UPI000276B82B	:	:	:	:

Description

Peroxidase [Source:UniProtKB/TrEMBL;Acc:K4CFF0]

Coordinates

chr7:+:61020110..61021912

Molecular Weight (calculated)

35938.9 Da

IEP (calculated)

7.929

GRAVY (calculated)

-0.087

Length

328 amino acids

Sequence
(BLAST)

001: MASFSYLMSV LVLCVIIGYT NAQLELNFYA KSCPKAEKII KDFVQQQVPK APNTAAAILR MHFHDCFVRG CDGSVLLNFT STNGNQTEKL ANPNLTLRGF
101: SFIDAVKRLV EAECPGVVSC ADIVALVARD AVVATGGPFW NVPTGRRDGT ISNVSEANAD IPAPTSNFTR LQQSFAKKGL DLNDLVLLSG AHTIGVSRCS
201: SFSERLYNFT GVVGTQDPSL DSEYADNLKS RKCRSINDNT TIVEMDPGSF KTFDLSYFKL LLKRRGLFQS DAALTTRTST KSFIEQLVDG PLNEFFDEFA
301: KSMEKMGRVE VKTGSAGEIR KHCAFVNS

Best Arabidopsis Sequence Match ( AT4G11290.1 )
(BLAST)

001: MTRFGLALLM ILVIQGLVTF SEAQLKMGFY DQTCPYAEKI VQDVVNQHIN NAPSLAAGLI RMHFHDCFVR GCDGSILINA TSSNQQVEKL APPNLTVRGF
101: DFIDKVKSAL ESKCPGIVSC ADIITLATRD SIVAIGGPTW NVPTGRRDGR ISNFAEAMNN IPPPFGNFTT LITLFGNQGL DVKDLVLLSG AHTIGVSHCS
201: SFSNRLFNFT GVGDQDPSLD SEYADNLKSR RCLSIADNTT KVEMDPGSRN TFDLSYYRLV LKRRGLFESD AALTMNPAAL AQVKRFAGGS EQEFFAEFSN
301: SMEKMGRIGV KTGSDGEIRR TCAFVN

Arabidopsis Description

PER39Peroxidase 39 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUT2]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.