Factsheet for Solyc05g046010.2.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 2
extracellular 7
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	plastid
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

extracellular: 26583031

msms PMID: 26583031 doi

F Gawehns, L Ma, O Bruning, PM Houterman, S Boeren, BJ Cornelissen, M Rep, FL Takken

Laboratory of Biochemistry, Wageningen University Wageningen, Netherlands., Molecular Plant Pathology, Faculty of Science, Swammerdam Institute for Life Sciences, University of Amsterdam Amsterdam, Netherlands., RNA Biology and Applied Bioinformatics Research Group and MAD: Dutch Genomics Service and Support Provider, Faculty of Science, Swammerdam Institute for Life Sciences, University of Amsterdam Amsterdam, Netherlands.

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc04g008430.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G05260.1	Solyc04g008430.1.1	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400013520	Potato	extracellular	96.64	96.64
Solyc05g046020.2.1	Tomato	extracellular	89.91	89.91
Solyc05g046030.2.1	Tomato	extracellular	89.6	89.6
Solyc07g052540.2.1	Tomato	extracellular	79.51	79.03
Solyc07g052530.2.1	Tomato	extracellular	78.59	78.12
Solyc07g052550.1.1	Tomato	extracellular	77.06	76.6
Solyc07g049240.2.1	Tomato	extracellular	75.23	74.32
Solyc07g052510.2.1	Tomato	extracellular	74.31	74.09
Solyc07g047740.2.1	Tomato	extracellular	74.62	73.72
Solyc04g056420.1.1	Tomato	extracellular	57.19	68.5
KRH26821	Soybean	endoplasmic reticulum	66.67	66.87
KRH22535	Soybean	extracellular	66.06	66.67
CDY46845	Canola	extracellular	66.36	66.56
KRH26822	Soybean	endoplasmic reticulum	66.36	66.56
Bra015404.1-P	Field mustard	extracellular	66.36	66.56
CDY10037	Canola	extracellular	66.06	66.26
CDY38641	Canola	extracellular	66.06	66.26
KRH22534	Soybean	extracellular	66.06	66.26
Bra031309.1-P	Field mustard	extracellular	66.06	66.26
Bra032474.1-P	Field mustard	extracellular	58.1	66.2
CDY55649	Canola	vacuole	66.36	65.96
Bra023862.1-P	Field mustard	vacuole	66.36	65.96
CDY59800	Canola	extracellular	65.75	65.95
CDY19299	Canola	vacuole	66.06	65.65
AT1G05260.1	Thale cress	extracellular	65.14	65.34
CDY49518	Canola	extracellular	64.53	64.72
KRH56093	Soybean	extracellular	64.22	64.62
CDX86795	Canola	extracellular	64.22	64.42
Bra035235.1-P	Field mustard	extracellular	64.22	64.42
CDY13252	Canola	extracellular	63.91	64.11
AT3G21770.1	Thale cress	extracellular	63.91	63.53
AT4G11290.1	Thale cress	extracellular	63.3	63.5
GSMUA_Achr2P03020_001	Banana	extracellular	59.02	63.49
KRH25412	Soybean	extracellular	62.08	62.65
GSMUA_Achr9P30170_001	Banana	extracellular	55.66	61.49
KRH56092	Soybean	extracellular, mitochondrion	60.86	61.42
EER88826	Sorghum	extracellular	62.08	61.33
CDY33143	Canola	extracellular	66.06	59.18
TraesCS7B01G353200.1	Wheat	extracellular	59.33	58.61
TraesCS7D01G442300.1	Wheat	extracellular	59.33	58.43
TraesCS7A01G453000.1	Wheat	extracellular	58.72	58.01
HORVU7Hr1G102480.7	Barley	extracellular	59.63	57.69
Os06t0681600-01	Rice	extracellular	58.72	56.97
TraesCS7A01G452900.1	Wheat	extracellular	57.19	56.33
TraesCS7D01G442200.1	Wheat	extracellular	56.88	56.02
Zm00001d014467_P002	Maize	vacuole	61.47	55.68
Solyc05g046000.2.1	Tomato	extracellular	53.52	54.35
Solyc08g075830.2.1	Tomato	extracellular	53.52	54.35
Solyc12g005790.1.1	Tomato	extracellular	53.52	54.01
KRH25410	Soybean	cytosol	40.06	53.25
Solyc01g067850.2.1	Tomato	extracellular	52.29	52.78
CDY10042	Canola	extracellular	25.69	51.85
TraesCS6A01G136500.1	Wheat	extracellular	51.68	51.68
Solyc12g005370.1.1	Tomato	extracellular	51.07	50.91
TraesCS7B01G353100.1	Wheat	extracellular	56.88	50.68
TraesCS6B01G164400.2	Wheat	extracellular	52.29	49.85
TraesCS6D01G125500.1	Wheat	extracellular	52.29	49.71
Os02t0161800-01	Rice	extracellular, mitochondrion	51.99	48.85
HORVU6Hr1G026230.5	Barley	extracellular	50.76	48.26
Solyc01g067860.2.1	Tomato	extracellular	48.01	47.87
EES06321	Sorghum	extracellular, golgi, plastid	51.38	47.73
Solyc06g054500.1.1	Tomato	extracellular	46.48	46.77
Solyc01g067880.1.1	Tomato	mitochondrion	36.39	45.95
Solyc02g064970.2.1	Tomato	extracellular	43.43	43.56
Solyc01g105070.2.1	Tomato	extracellular	43.73	43.07
Zm00001d053839_P001	Maize	extracellular	28.13	41.44
Solyc01g067870.2.1	Tomato	extracellular	47.09	40.85
Solyc01g104860.2.1	Tomato	extracellular	39.14	40.0
Solyc10g047110.1.1	Tomato	extracellular	33.64	38.46
Solyc04g064690.2.1	Tomato	extracellular, vacuole	36.7	31.01

Protein Annotations

KEGG:00940+1.11.1.7	Gene3D:1.10.420.10	Gene3D:1.10.520.10	MapMan:35.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004601	GO:GO:0005488	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618	GO:GO:0005623
GO:GO:0006950	GO:GO:0006979	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009505
GO:GO:0009506	GO:GO:0009664	GO:GO:0009987	GO:GO:0016043	GO:GO:0016491	GO:GO:0020037
GO:GO:0030312	GO:GO:0042744	GO:GO:0046872	GO:GO:0055114	GO:GO:0098869	InterPro:Haem_peroxidase
InterPro:Haem_peroxidase_pln/fun/bac	InterPro:IPR002016	UniProt:K4C0T4	PFAM:PF00141	PRINTS:PR00458	PRINTS:PR00461
ScanProsite:PS00435	ScanProsite:PS00436	PFscan:PS50873	PANTHER:PTHR31235	PANTHER:PTHR31235:SF39	InterPro:Peroxidase_pln
InterPro:Peroxidases_AS	InterPro:Peroxidases_heam-ligand_BS	SUPFAM:SSF48113	InterPro:Secretory_peroxidase	SignalP:SignalP-noTM	EnsemblPlantsGene:Solyc05g046010.2
EnsemblPlants:Solyc05g046010.2.1	UniParc:UPI00027668EB	SEG:seg	:	:	:

Description

Peroxidase [Source:UniProtKB/TrEMBL;Acc:K4C0T4]

Coordinates

chr5:-:58047387..58049383

Molecular Weight (calculated)

35903.2 Da

IEP (calculated)

8.252

GRAVY (calculated)

0.031

Length

327 amino acids

Sequence
(BLAST)

001: MSTFVYLCPL IFMCILVSSN AQLQQNFYAK SCPKAEKIIL EYVHKHIPNA PSLAAALIRM HFHDCFVRGC DASVLLNFTS SSGSQTEKVG IPNLTLRGFS
101: FIDDIKKIIE AECPGIVSCA DIISLVARDS IVVIGGPFWN VPTGRRDGTI SIASETLSDI PSPFSNFSTL QNDFAKKGLD LKDLVLLSGA HTIGVSLCTS
201: FSNRLYNFTG TFGTQDPSLD SEYAANLKAN KCKSINDNTT IVEMDPGSFK TFDLSYYKLL LKRRGLFQSD AALTTSTTTK RYIDQLVAGS LKEFYVKFAQ
301: SMEKMGRIEV KTGSTGEIRK HCAVVNS

Best Arabidopsis Sequence Match ( AT1G05260.1 )
(BLAST)

001: MNCLIAIALS VSFFLVGIVG PIQAQLQMNF YANSCPNAEK IVQDFVSNHV SNAPSLAAAL IRMHFHDCFV RGCDGSVLIN STSGNAERDA TPNLTVRGFG
101: FIDAIKSVLE AQCPGIVSCA DIIALASRDA VVFTGGPNWS VPTGRRDGRI SNAAEALANI PPPTSNITNL QTLFANQGLD LKDLVLLSGA HTIGVSHCSS
201: FTNRLYNFTG RGGQDPALDS EYAANLKSRK CPSLNDNKTI VEMDPGSRKT FDLSYYQLVL KRRGLFQSDS ALTTNPTTLS NINRILTGSV GSFFSEFAKS
301: MEKMGRINVK TGSAGVVRRQ CSVANS

Arabidopsis Description

PER3Peroxidase [Source:UniProtKB/TrEMBL;Acc:Q0WSR2]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.