Factsheet for PGSC0003DMT400013520

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 2
extracellular 7
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	plastid
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400075691

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G05260.1	PGSC0003DMT400075691	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc05g046010.2.1	Tomato	extracellular	96.64	96.64
PGSC0003DMT400013504	Potato	extracellular	89.91	89.91
PGSC0003DMT400038889	Potato	extracellular	88.99	88.99
PGSC0003DMT400065516	Potato	extracellular	79.2	78.72
PGSC0003DMT400065517	Potato	extracellular	78.9	78.42
PGSC0003DMT400001848	Potato	extracellular	74.62	73.72
PGSC0003DMT400065518	Potato	extracellular	73.39	73.17
KRH26821	Soybean	endoplasmic reticulum	66.67	66.87
KRH22535	Soybean	extracellular	66.06	66.67
KRH26822	Soybean	endoplasmic reticulum	66.36	66.56
Bra015404.1-P	Field mustard	extracellular	66.36	66.56
CDY46845	Canola	extracellular	66.36	66.56
Bra032474.1-P	Field mustard	extracellular	58.41	66.55
CDY10037	Canola	extracellular	66.06	66.26
KRH22534	Soybean	extracellular	66.06	66.26
Bra031309.1-P	Field mustard	extracellular	65.75	65.95
CDY59800	Canola	extracellular	65.75	65.95
CDY38641	Canola	extracellular	65.75	65.95
CDY55649	Canola	vacuole	66.06	65.65
Bra023862.1-P	Field mustard	vacuole	66.06	65.65
CDY19299	Canola	vacuole	65.75	65.35
AT1G05260.1	Thale cress	extracellular	65.14	65.34
KRH56093	Soybean	extracellular	64.53	64.92
CDY49518	Canola	extracellular	64.53	64.72
CDX86795	Canola	extracellular	64.53	64.72
Bra035235.1-P	Field mustard	extracellular	64.53	64.72
CDY13252	Canola	extracellular	64.22	64.42
GSMUA_Achr2P03020_001	Banana	extracellular	59.63	64.14
AT4G11290.1	Thale cress	extracellular	63.3	63.5
AT3G21770.1	Thale cress	extracellular	63.61	63.22
KRH25412	Soybean	extracellular	62.08	62.65
KRH56092	Soybean	extracellular, mitochondrion	61.16	61.73
EER88826	Sorghum	extracellular	62.08	61.33
GSMUA_Achr9P30170_001	Banana	extracellular	55.35	61.15
CDY33143	Canola	extracellular	65.75	58.9
TraesCS7B01G353200.1	Wheat	extracellular	59.02	58.31
TraesCS7D01G442300.1	Wheat	extracellular	59.02	58.13
TraesCS7A01G453000.1	Wheat	extracellular	58.41	57.7
HORVU7Hr1G102480.7	Barley	extracellular	59.63	57.69
Os06t0681600-01	Rice	extracellular	58.41	56.68
TraesCS7A01G452900.1	Wheat	extracellular	56.88	56.02
TraesCS7D01G442200.1	Wheat	extracellular	56.57	55.72
Zm00001d014467_P002	Maize	vacuole	61.47	55.68
PGSC0003DMT400013503	Potato	extracellular	53.82	54.66
PGSC0003DMT400062520	Potato	extracellular	53.21	54.04
PGSC0003DMT400062515	Potato	extracellular	53.52	54.01
PGSC0003DMT400062533	Potato	extracellular	52.91	53.73
KRH25410	Soybean	cytosol	39.76	52.85
PGSC0003DMT400058799	Potato	extracellular	51.99	52.31
TraesCS6A01G136500.1	Wheat	extracellular	51.68	51.68
CDY10042	Canola	extracellular	25.38	51.23
PGSC0003DMT400056119	Potato	extracellular	51.07	50.91
TraesCS7B01G353100.1	Wheat	extracellular	56.57	50.41
TraesCS6B01G164400.2	Wheat	extracellular	51.99	49.56
PGSC0003DMT400058807	Potato	extracellular	49.24	49.54
TraesCS6D01G125500.1	Wheat	extracellular	51.99	49.42
Os02t0161800-01	Rice	extracellular, mitochondrion	52.29	49.14
PGSC0003DMT400079041	Potato	cytosol	46.48	48.72
PGSC0003DMT400054080	Potato	extracellular	35.47	48.13
EES06321	Sorghum	extracellular, golgi, plastid	51.68	48.01
HORVU6Hr1G026230.5	Barley	extracellular	50.46	47.97
PGSC0003DMT400062534	Potato	extracellular	47.09	45.97
PGSC0003DMT400065498	Potato	extracellular	43.73	43.87
PGSC0003DMT400032789	Potato	extracellular	42.81	42.3
Zm00001d053839_P001	Maize	extracellular	28.44	41.89
PGSC0003DMT400001851	Potato	extracellular	74.01	40.88
PGSC0003DMT400085904	Potato	extracellular	37.61	38.2
PGSC0003DMT400063828	Potato	cytosol, extracellular, nucleus	31.5	37.73

Protein Annotations

KEGG:00940+1.11.1.7	Gene3D:1.10.420.10	Gene3D:1.10.520.10	EntrezGene:102589372	MapMan:35.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0004601	GO:GO:0005488	GO:GO:0005575	GO:GO:0005576	GO:GO:0006950
GO:GO:0006979	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016491
GO:GO:0020037	GO:GO:0042744	GO:GO:0046872	GO:GO:0055114	GO:GO:0098869	InterPro:Haem_peroxidase
InterPro:Haem_peroxidase_pln/fun/bac	InterPro:IPR002016	UniProt:M1A2Z2	PFAM:PF00141	EnsemblPlantsGene:PGSC0003DMG400005279	PGSC:PGSC0003DMG400005279
EnsemblPlants:PGSC0003DMT400013520	PRINTS:PR00458	PRINTS:PR00461	ScanProsite:PS00435	ScanProsite:PS00436	PFscan:PS50873
PANTHER:PTHR31235	PANTHER:PTHR31235:SF39	InterPro:Peroxidase_pln	InterPro:Peroxidases_AS	InterPro:Peroxidases_heam-ligand_BS	SUPFAM:SSF48113
InterPro:Secretory_peroxidase	SignalP:SignalP-noTM	UniParc:UPI000295D75E	RefSeq:XP_006356922.1	SEG:seg	:

Description

Peroxidase [Source:PGSC_GENE;Acc:PGSC0003DMG400005279]

Coordinates

chr5:-:42523943..42525912

Molecular Weight (calculated)

35797.1 Da

IEP (calculated)

8.083

GRAVY (calculated)

0.047

Length

327 amino acids

Sequence
(BLAST)

001: MTTFMYLCSL ILMCILVSSN AQLQQNFYAK SCPKAEKIIL EYVHKHIPNA PSLAAALIRM HFHDCFVRGC DASVLLNFTS SSGSQTEKVG IPNLTLRGFS
101: FIDDIKKIIE AECPGVVSCA DIISLVARDS IVVIGGPFWN VPTGRRDGTI SIASETLSDI PSPFSNFSTL QNDFAKKGLD LKDLVLLSGA HTIGVSLCTS
201: FSNRLYNFTG TFGTQDPSLD SEYAANLKAK KCKSINDNTT IVEMDPGSFK TFDLSYYKLL LKRRGLFQSD AALTTSTTTK TYINQLVAGS LKEFYVEFAQ
301: SMEKMGRIEV KAGSTGEIRK NCAVVNS

Best Arabidopsis Sequence Match ( AT1G05260.1 )
(BLAST)

001: MNCLIAIALS VSFFLVGIVG PIQAQLQMNF YANSCPNAEK IVQDFVSNHV SNAPSLAAAL IRMHFHDCFV RGCDGSVLIN STSGNAERDA TPNLTVRGFG
101: FIDAIKSVLE AQCPGIVSCA DIIALASRDA VVFTGGPNWS VPTGRRDGRI SNAAEALANI PPPTSNITNL QTLFANQGLD LKDLVLLSGA HTIGVSHCSS
201: FTNRLYNFTG RGGQDPALDS EYAANLKSRK CPSLNDNKTI VEMDPGSRKT FDLSYYQLVL KRRGLFQSDS ALTTNPTTLS NINRILTGSV GSFFSEFAKS
301: MEKMGRINVK TGSAGVVRRQ CSVANS

Arabidopsis Description

PER3Peroxidase [Source:UniProtKB/TrEMBL;Acc:Q0WSR2]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.