Factsheet for PGSC0003DMT400065516

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

nucleus 1
plastid 1
extracellular 7
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400075691

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G05260.1	PGSC0003DMT400075691	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400065517	Potato	extracellular	96.66	96.66
Solyc07g052540.2.1	Tomato	extracellular	95.74	95.74
Solyc07g052530.2.1	Tomato	extracellular	95.44	95.44
Solyc07g052550.1.1	Tomato	extracellular	91.19	91.19
PGSC0003DMT400001848	Potato	extracellular	83.89	83.38
PGSC0003DMT400013504	Potato	extracellular	81.76	82.26
PGSC0003DMT400038889	Potato	extracellular	81.16	81.65
PGSC0003DMT400013520	Potato	extracellular	78.72	79.2
PGSC0003DMT400065518	Potato	extracellular	75.99	76.22
Bra032474.1-P	Field mustard	extracellular	61.09	70.03
CDY10037	Canola	extracellular	68.39	69.02
CDY46845	Canola	extracellular	68.09	68.71
CDY59800	Canola	extracellular	68.09	68.71
Bra015404.1-P	Field mustard	extracellular	67.78	68.4
KRH26822	Soybean	endoplasmic reticulum	66.87	67.48
KRH22534	Soybean	extracellular	66.57	67.18
AT1G05260.1	Thale cress	extracellular	66.57	67.18
CDY49518	Canola	extracellular	66.57	67.18
KRH26821	Soybean	endoplasmic reticulum	66.26	66.87
KRH22535	Soybean	extracellular	65.65	66.67
CDY38641	Canola	extracellular	65.35	65.95
CDX86795	Canola	extracellular	65.35	65.95
Bra035235.1-P	Field mustard	extracellular	65.35	65.95
Bra031309.1-P	Field mustard	extracellular	65.35	65.95
GSMUA_Achr2P03020_001	Banana	extracellular	60.79	65.79
CDY13252	Canola	extracellular	65.05	65.64
KRH56093	Soybean	extracellular	64.74	65.54
GSMUA_Achr9P30170_001	Banana	extracellular	58.36	64.86
AT4G11290.1	Thale cress	extracellular	64.13	64.72
CDY55649	Canola	vacuole	64.13	64.13
CDY19299	Canola	vacuole	64.13	64.13
Bra023862.1-P	Field mustard	vacuole	64.13	64.13
AT3G21770.1	Thale cress	extracellular	63.53	63.53
KRH56092	Soybean	extracellular, mitochondrion	62.01	62.96
KRH25412	Soybean	extracellular	62.01	62.96
EER88826	Sorghum	extracellular	62.31	61.93
TraesCS7B01G353200.1	Wheat	extracellular	59.57	59.21
TraesCS7A01G453000.1	Wheat	extracellular	59.57	59.21
TraesCS7D01G442300.1	Wheat	extracellular	59.57	59.04
CDY33143	Canola	extracellular	64.74	58.36
HORVU7Hr1G102480.7	Barley	extracellular	59.27	57.69
TraesCS7A01G452900.1	Wheat	extracellular	57.75	57.23
TraesCS7D01G442200.1	Wheat	extracellular	57.75	57.23
PGSC0003DMT400013503	Potato	extracellular	55.93	57.14
Os06t0681600-01	Rice	extracellular	57.75	56.38
Zm00001d014467_P002	Maize	vacuole	61.7	56.23
PGSC0003DMT400062520	Potato	extracellular	53.5	54.66
PGSC0003DMT400062533	Potato	extracellular	53.5	54.66
PGSC0003DMT400062515	Potato	extracellular	53.5	54.32
PGSC0003DMT400056119	Potato	extracellular	53.5	53.66
PGSC0003DMT400058799	Potato	extracellular	52.28	52.92
CDY10042	Canola	extracellular	25.84	52.47
TraesCS7B01G353100.1	Wheat	extracellular	57.75	51.77
TraesCS6A01G136500.1	Wheat	extracellular	51.37	51.68
KRH25410	Soybean	cytosol	38.6	51.63
TraesCS6D01G125500.1	Wheat	extracellular	51.98	49.71
TraesCS6B01G164400.2	Wheat	extracellular	51.67	49.56
Os02t0161800-01	Rice	extracellular, mitochondrion	52.28	49.43
PGSC0003DMT400054080	Potato	extracellular	35.87	48.96
EES06321	Sorghum	extracellular, golgi, plastid	52.28	48.86
PGSC0003DMT400058807	Potato	extracellular	47.42	48.0
HORVU6Hr1G026230.5	Barley	extracellular	50.15	47.97
PGSC0003DMT400079041	Potato	cytosol	44.68	47.12
PGSC0003DMT400001851	Potato	extracellular	82.67	45.95
PGSC0003DMT400062534	Potato	extracellular	46.5	45.67
PGSC0003DMT400065498	Potato	extracellular	44.98	45.4
PGSC0003DMT400032789	Potato	extracellular	44.38	44.11
Zm00001d053839_P001	Maize	extracellular	28.88	42.79
PGSC0003DMT400085904	Potato	extracellular	40.43	41.3
PGSC0003DMT400063828	Potato	cytosol, extracellular, nucleus	34.04	41.03

Protein Annotations

KEGG:00940+1.11.1.7	Gene3D:1.10.420.10	Gene3D:1.10.520.10	EntrezGene:102585258	EntrezGene:102585597	MapMan:35.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0004601	GO:GO:0005488	GO:GO:0005575	GO:GO:0005576
GO:GO:0006950	GO:GO:0006979	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987
GO:GO:0016491	GO:GO:0020037	GO:GO:0042744	GO:GO:0046872	GO:GO:0055114	GO:GO:0098869
InterPro:Haem_peroxidase	InterPro:Haem_peroxidase_pln/fun/bac	InterPro:IPR002016	UniProt:M1CE53	PFAM:PF00141	EnsemblPlantsGene:PGSC0003DMG400025490
PGSC:PGSC0003DMG400025490	EnsemblPlants:PGSC0003DMT400065516	PRINTS:PR00458	PRINTS:PR00461	ScanProsite:PS00435	ScanProsite:PS00436
PFscan:PS50873	PANTHER:PTHR31235	PANTHER:PTHR31235:SF39	InterPro:Peroxidase_pln	InterPro:Peroxidases_AS	InterPro:Peroxidases_heam-ligand_BS
SUPFAM:SSF48113	InterPro:Secretory_peroxidase	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000295841E	RefSeq:XP_006367288.1
RefSeq:XP_015160827.1	:	:	:	:	:

Description

Peroxidase [Source:PGSC_GENE;Acc:PGSC0003DMG400025490]

Coordinates

chr7:+:47178224..47179898

Molecular Weight (calculated)

35806.1 Da

IEP (calculated)

8.939

GRAVY (calculated)

-0.038

Length

329 amino acids

Sequence
(BLAST)

001: MSTFGLALFV FCILGIFINA SHAQLQHNFY AKSCPKAEKI IEDYVHKHIP KAPSLAAALL RLHFHDCFVR GCDGSVLLNF TLSTKNQTEK VAIPNQTLRG
101: FSFIDGVKKI VEAECPGVVS CADIVTLVAR DSVVVTGGPF WNVPTGRRDG KISNASEALA NIPPPTSNLS SLQTSFANKG LDLKDLVLLS GAHTIGVSHC
201: SSFSTRLYNF TGVLGTQDPS LDSEYASNLK GKKCKSINDN TTIVEMDPGS FRTFDLSYYK LLLKRRGLFQ SDAALTTSAT TKSFINQLVK GSLEEFNTEF
301: AKAMEKMGKI EVKTGSAGEI RKQCAFVNK

Best Arabidopsis Sequence Match ( AT1G05260.1 )
(BLAST)

001: MNCLIAIALS VSFFLVGIVG PIQAQLQMNF YANSCPNAEK IVQDFVSNHV SNAPSLAAAL IRMHFHDCFV RGCDGSVLIN STSGNAERDA TPNLTVRGFG
101: FIDAIKSVLE AQCPGIVSCA DIIALASRDA VVFTGGPNWS VPTGRRDGRI SNAAEALANI PPPTSNITNL QTLFANQGLD LKDLVLLSGA HTIGVSHCSS
201: FTNRLYNFTG RGGQDPALDS EYAANLKSRK CPSLNDNKTI VEMDPGSRKT FDLSYYQLVL KRRGLFQSDS ALTTNPTTLS NINRILTGSV GSFFSEFAKS
301: MEKMGRINVK TGSAGVVRRQ CSVANS

Arabidopsis Description

PER3Peroxidase [Source:UniProtKB/TrEMBL;Acc:Q0WSR2]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.