Factsheet for PGSC0003DMT400032789

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

nucleus 1
plastid 1
extracellular 6
endoplasmic reticulum 4
vacuole 4
plasma membrane 5
golgi 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	extracellular

cytosol: 22313117
extracellular: 22313117

msms PMID: 22313117 doi

S Lim, K Chisholm, RH Coffin, RD Peters, KI Al-Mughrabi, G Wang-Pruski, DM Pinto

Department of Plant and Animal Sciences, Nova Scotia Agricultural College, Truro, Nova Scotia, Canada.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g105070.2.1	Tomato	extracellular	95.17	94.88
VIT_12s0055g01010.t01	Wine grape	plastid	71.9	76.53
VIT_12s0055g01020.t01	Wine grape	plastid	70.69	75.24
VIT_12s0055g01000.t01	Wine grape	plastid	70.09	74.6
KRH10519	Soybean	endoplasmic reticulum	71.9	73.23
VIT_12s0055g01030.t01	Wine grape	extracellular	71.6	73.15
KRH10518	Soybean	extracellular	70.69	72.67
KRH43912	Soybean	endoplasmic reticulum	70.39	71.69
VIT_12s0055g00980.t01	Wine grape	extracellular	61.93	68.79
KRH43911	Soybean	extracellular	63.14	65.11
AT5G39580.1	Thale cress	extracellular	61.03	63.32
CDY37007	Canola	extracellular	59.82	62.26
Bra028436.1-P	Field mustard	extracellular	59.82	62.26
PGSC0003DMT400065498	Potato	extracellular	61.03	61.96
AT5G64120.1	Thale cress	extracellular	61.03	61.59
Bra031933.1-P	Field mustard	extracellular	58.61	60.81
CDY43791	Canola	extracellular	60.12	60.67
CDY66486	Canola	extracellular	60.12	60.67
Bra024269.1-P	Field mustard	extracellular	60.12	60.67
CDY31334	Canola	extracellular	59.52	60.24
CDY50836	Canola	extracellular	59.52	60.06
CDY39825	Canola	extracellular	58.91	59.45
CDY39826	Canola	extracellular, golgi	58.31	57.96
CDY31335	Canola	extracellular	57.7	57.36
Bra031934.1-P	Field mustard	extracellular, golgi	57.4	57.06
AT5G64100.1	Thale cress	extracellular	56.5	56.5
CDY43790	Canola	extracellular	55.59	55.26
Bra024268.1-P	Field mustard	extracellular	55.59	55.26
AT5G64110.1	Thale cress	extracellular	54.98	55.15
CDX84491	Canola	extracellular	55.29	54.79
CDX84494	Canola	extracellular	55.29	54.79
Bra024267.1-P	Field mustard	extracellular	54.68	54.19
CDY43789	Canola	extracellular	54.68	54.19
CDX84495	Canola	extracellular	54.38	54.05
PGSC0003DMT400062520	Potato	extracellular	47.43	48.76
PGSC0003DMT400063828	Potato	cytosol, extracellular, nucleus	39.88	48.35
PGSC0003DMT400062533	Potato	extracellular	46.83	48.14
PGSC0003DMT400062515	Potato	extracellular	45.62	46.6
PGSC0003DMT400085904	Potato	extracellular	45.32	46.58
PGSC0003DMT400054080	Potato	extracellular	33.84	46.47
PGSC0003DMT400001848	Potato	extracellular	45.92	45.92
PGSC0003DMT400013503	Potato	extracellular	44.11	45.34
PGSC0003DMT400065516	Potato	extracellular	44.11	44.38
PGSC0003DMT400065517	Potato	extracellular	44.11	44.38
PGSC0003DMT400038889	Potato	extracellular	43.81	44.34
PGSC0003DMT400013504	Potato	extracellular	43.81	44.34
PGSC0003DMT400058799	Potato	extracellular	43.5	44.31
PGSC0003DMT400065518	Potato	extracellular	43.81	44.21
PGSC0003DMT400013520	Potato	extracellular	42.3	42.81
PGSC0003DMT400058807	Potato	extracellular	41.69	42.46
PGSC0003DMT400056119	Potato	extracellular	41.99	42.38
PGSC0003DMT400079041	Potato	cytosol	38.97	41.35
PGSC0003DMT400062534	Potato	extracellular	41.39	40.9
PGSC0003DMT400001851	Potato	extracellular	46.83	26.18

Protein Annotations

KEGG:00940+1.11.1.7	Gene3D:1.10.420.10	Gene3D:1.10.520.10	EntrezGene:102585502	MapMan:35.1	EMBL:AM231411
ProteinID:CAJ77506	ProteinID:CAJ77506.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004601	GO:GO:0005488
GO:GO:0005575	GO:GO:0005576	GO:GO:0006950	GO:GO:0006979	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009987	GO:GO:0016491	GO:GO:0020037	GO:GO:0042744	GO:GO:0046872
GO:GO:0055114	GO:GO:0098869	InterPro:Haem_peroxidase	InterPro:Haem_peroxidase_pln/fun/bac	InterPro:IPR002016	UniProt:M1AY17
PFAM:PF00141	EnsemblPlantsGene:PGSC0003DMG400012589	PGSC:PGSC0003DMG400012589	EnsemblPlants:PGSC0003DMT400032789	PRINTS:PR00458	PRINTS:PR00461
ScanProsite:PS00435	ScanProsite:PS00436	PFscan:PS50873	PANTHER:PTHR31235	PANTHER:PTHR31235:SF160	InterPro:Peroxidase_pln
InterPro:Peroxidases_AS	InterPro:Peroxidases_heam-ligand_BS	SUPFAM:SSF48113	InterPro:Secretory_peroxidase	TMHMM:TMhelix	UniParc:UPI000296EE17
RefSeq:XP_006351795.1	SEG:seg	:	:	:	:

Description

Cationic peroxidase [Source:PGSC_GENE;Acc:PGSC0003DMG400012589]

Coordinates

chr1:+:81814018..81815680

Molecular Weight (calculated)

35960.9 Da

IEP (calculated)

8.200

GRAVY (calculated)

-0.039

Length

331 amino acids

Sequence
(BLAST)

001: MAYYYHNSIN KMVTIIFFLV LVIDVTMVLG QGTRVGFYSS TCPRAESIVQ STVRSHFQSD PTVAPGLLRM HFHDCFVQGC DGSILISGAG TERTAPPNTL
101: LRGYEVIDDA KQQIEALCPG VVSCADILAL AARDSVLLTK GLTWSVPTGR RDGRVSRASD ASNLPGFTES VDAQKQKFAA KGLNTQDLVT LVGGHTIGTS
201: ACQFFSYRLY NFNSTGGPDP SIDATFLPQL QALCPQNGDG SKRVALDTGS VNNFDTSYFS NLRNGRGILE SDQKLWTDAS TKVFVQRYLG LRGFLGLRFA
301: LEFGKSMVKM SNIEVLTGTN GEIRKVCSAF N

Best Arabidopsis Sequence Match ( AT2G41480.1 )
(BLAST)

001: MGVYLGKYCY IMIIMLVLVL GKEVRSQLLK NGYYSTSCPK AESIVRSTVE SHFDSDPTIS PGLLRLHFHD CFVQGCDGSV LIKGKSAEQA ALPNLGLRGL
101: EVIDDAKARL EAVCPGVVSC ADILALAARD SVDLSDGPSW RVPTGRKDGR ISLATEASNL PSPLDSVAVQ KQKFQDKGLD THDLVTLLGA HTIGQTDCLF
201: FRYRLYNFTV TGNSDPTISP SFLTQLKTLC PPNGDGSKRV ALDIGSPSKF DESFFKNLRD GNAILESDQR LWSDAETNAV VKKYASRLRG LLGFRFDYEF
301: GKAMIKMSSI DVKTDVDGEV RKVCSKVN

Arabidopsis Description

PER25Peroxidase 25 [Source:UniProtKB/Swiss-Prot;Acc:O80822]
SUBAcon: [plasma membrane,golgi,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.