Factsheet for VIT_12s0055g00980.t01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 5
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
plastid 2
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	secretory
EpiLoc:	plastid
iPSORT:	mitochondrion
MultiLoc:	extracellular
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_12s0055g01000.t01	Wine grape	plastid	75.5	72.35
VIT_12s0055g01020.t01	Wine grape	plastid	74.83	71.7
VIT_12s0055g01010.t01	Wine grape	plastid	73.49	70.42
VIT_12s0055g01030.t01	Wine grape	extracellular	75.17	69.14
PGSC0003DMT400032789	Potato	extracellular	68.79	61.93
Solyc01g105070.2.1	Tomato	extracellular	68.79	61.75
KRH10519	Soybean	endoplasmic reticulum	62.08	56.92
KRH10518	Soybean	extracellular	61.07	56.52
KRH43912	Soybean	endoplasmic reticulum	60.07	55.08
AT5G39580.1	Thale cress	extracellular	57.38	53.6
CDY37007	Canola	extracellular	56.38	52.83
Bra028436.1-P	Field mustard	extracellular	55.7	52.2
CDY43791	Canola	extracellular	56.71	51.52
CDY66486	Canola	extracellular	56.71	51.52
Bra024269.1-P	Field mustard	extracellular	56.71	51.52
AT5G64120.1	Thale cress	extracellular	56.38	51.22
CDY39825	Canola	extracellular	56.38	51.22
Bra031933.1-P	Field mustard	extracellular	54.7	51.1
KRH43911	Soybean	extracellular	55.03	51.09
CDY50836	Canola	extracellular	56.04	50.91
CDY31334	Canola	extracellular	55.37	50.46
VIT_11s0016g05320.t01	Wine grape	extracellular	54.36	50.0
CDY39826	Canola	extracellular, golgi	52.35	46.85
CDY31335	Canola	extracellular	52.01	46.55
Bra031934.1-P	Field mustard	extracellular, golgi	52.01	46.55
CDY43790	Canola	extracellular	51.68	46.25
Bra024268.1-P	Field mustard	extracellular	51.68	46.25
CDX84495	Canola	extracellular	51.01	45.65
AT5G64100.1	Thale cress	extracellular	50.67	45.62
CDX84491	Canola	extracellular	51.01	45.51
AT5G64110.1	Thale cress	extracellular	50.34	45.45
CDX84494	Canola	extracellular	50.67	45.21
CDY43789	Canola	extracellular	50.34	44.91
Bra024267.1-P	Field mustard	extracellular	50.34	44.91
VIT_05s0020g02120.t01	Wine grape	cytosol	38.26	43.51
VIT_12s0059g02410.t01	Wine grape	extracellular	45.3	41.16
VIT_10s0116g00340.t01	Wine grape	extracellular	43.29	39.57
VIT_12s0055g00810.t01	Wine grape	extracellular	42.62	39.32
VIT_18s0001g15390.t01	Wine grape	cytosol	35.57	37.46
VIT_07s0104g01100.t01	Wine grape	extracellular	40.27	37.15
VIT_05s0020g02110.t01	Wine grape	plastid	23.49	27.13
VIT_11s0016g05280.t01	Wine grape	extracellular	52.35	24.04

Protein Annotations

KEGG:00940+1.11.1.7	Gene3D:1.10.420.10	Gene3D:1.10.520.10	EntrezGene:100245326	wikigene:100245326	MapMan:35.1
ProteinID:CBI20054	ProteinID:CBI20054.3	UniProt:D7STE0	EMBL:FN595228	GO:GO:0003674	GO:GO:0003824
GO:GO:0004601	GO:GO:0005488	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618	GO:GO:0005623
GO:GO:0006950	GO:GO:0006979	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009505
GO:GO:0009506	GO:GO:0009664	GO:GO:0009987	GO:GO:0016043	GO:GO:0016491	GO:GO:0020037
GO:GO:0030312	GO:GO:0042744	GO:GO:0046872	GO:GO:0055114	GO:GO:0098869	InterPro:Haem_peroxidase
InterPro:Haem_peroxidase_pln/fun/bac	InterPro:IPR002016	EntrezGene:LOC100245326	wikigene:LOC100245326	PFAM:PF00141	PRINTS:PR00458
PRINTS:PR00461	ScanProsite:PS00435	ScanProsite:PS00436	PFscan:PS50873	PANTHER:PTHR31235	PANTHER:PTHR31235:SF160
InterPro:Peroxidase_pln	InterPro:Peroxidases_AS	InterPro:Peroxidases_heam-ligand_BS	SUPFAM:SSF48113	InterPro:Secretory_peroxidase	SignalP:SignalP-noTM
UniParc:UPI000198466D	ArrayExpress:VIT_12s0055g00980	EnsemblPlantsGene:VIT_12s0055g00980	EnsemblPlants:VIT_12s0055g00980.t01	RefSeq:XP_002269063	RefSeq:XP_002269063.1
SEG:seg	:	:	:	:	:

Description

Peroxidase [Source:UniProtKB/TrEMBL;Acc:D7STE0]

Coordinates

chr12:-:14448034..14449637

Molecular Weight (calculated)

32437.6 Da

IEP (calculated)

8.325

GRAVY (calculated)

-0.129

Length

298 amino acids

Sequence
(BLAST)

001: MFVFLLLAKA FALVHGQGTR VGFYSASCPQ AEFIVQLTVA AHFQSDPAIA RGLLRMHFHD CFVRGCDASI LINGTSTEKT TTPNSLLKGY DAIDDAKSQI
101: EDVCPGVVSC ADILALAARD AVVLTNGPRW LVLTERRDGR VSLASDTNNL PGFTESIASQ KKKFADKGFN DQDLVTLVGG HTIGTAACQS FRYRLYNCSN
201: TSANGGDPCM DAAFVSQLQK MCPANRDGSK RIALDTGSSD RFGGSFFTNL RNGRGILESD WKLRTDASTR AYVQRFLGLR GELNFNMEFG RSIVKMSN

Best Arabidopsis Sequence Match ( AT2G41480.1 )
(BLAST)

001: MGVYLGKYCY IMIIMLVLVL GKEVRSQLLK NGYYSTSCPK AESIVRSTVE SHFDSDPTIS PGLLRLHFHD CFVQGCDGSV LIKGKSAEQA ALPNLGLRGL
101: EVIDDAKARL EAVCPGVVSC ADILALAARD SVDLSDGPSW RVPTGRKDGR ISLATEASNL PSPLDSVAVQ KQKFQDKGLD THDLVTLLGA HTIGQTDCLF
201: FRYRLYNFTV TGNSDPTISP SFLTQLKTLC PPNGDGSKRV ALDIGSPSKF DESFFKNLRD GNAILESDQR LWSDAETNAV VKKYASRLRG LLGFRFDYEF
301: GKAMIKMSSI DVKTDVDGEV RKVCSKVN

Arabidopsis Description

PER25Peroxidase 25 [Source:UniProtKB/Swiss-Prot;Acc:O80822]
SUBAcon: [plasma membrane,golgi,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.