Factsheet for VIT_11s0016g05280.t01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 5
plasma membrane 7
golgi 5
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

extracellular: 23391302

msms PMID: 23391302 doi

B Delaunois, T Colby, N Belloy, A Conreux, A Harzen, F Baillieul, C Clément, J Schmidt, P Jeandet, S Cordelier

Université de Reims Champagne-Ardenne, UFR Sciences Exactes et Naturelles, Unité de Recherche Vigne et Vins de Champagne - EA 4707, Laboratoire de Stress, Défenses et Reproduction des Plantes, B,P, 1039, Reims, cedex 02, 51687, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_11s0016g05320.t01	Wine grape	extracellular	37.75	75.62
Os01t0172600-01	Rice	extracellular	24.19	69.16
KRH54959	Soybean	extracellular	33.13	66.56
KRH20268	Soybean	extracellular, golgi, mitochondrion, plasma membrane	34.36	64.27
PGSC0003DMT400065498	Potato	extracellular	32.2	64.11
CDY14775	Canola	extracellular	31.9	63.5
Solyc02g064970.2.1	Tomato	extracellular	31.9	63.5
AT2G41480.1	Thale cress	extracellular, golgi, plasma membrane	32.05	63.41
Bra016930.1-P	Field mustard	extracellular	31.74	63.19
CDY22526	Canola	extracellular	29.58	63.16
EES02383	Sorghum	extracellular	32.2	63.14
CDY06919	Canola	extracellular	31.59	62.88
Bra000228.1-P	Field mustard	extracellular	31.59	62.69
CDY35411	Canola	extracellular	31.59	62.69
TraesCS3D01G130800.1	Wheat	extracellular	31.43	62.58
TraesCS3A01G129900.1	Wheat	extracellular	30.97	61.66
HORVU3Hr1G024510.1	Barley	extracellular	30.97	61.66
HORVU0Hr1G006290.2	Barley	extracellular	30.97	61.66
TraesCS3B01G149000.1	Wheat	extracellular	30.82	61.35
VIT_12s0055g01010.t01	Wine grape	plastid	28.66	59.81
VIT_12s0055g01000.t01	Wine grape	plastid	28.04	58.52
VIT_12s0055g01030.t01	Wine grape	extracellular	29.12	58.33
VIT_12s0055g01020.t01	Wine grape	plastid	27.58	57.56
GSMUA_Achr8P26080_001	Banana	extracellular	32.05	53.06
VIT_12s0055g00980.t01	Wine grape	extracellular	24.04	52.35
VIT_05s0020g02120.t01	Wine grape	cytosol	19.41	48.09
VIT_18s0001g15390.t01	Wine grape	cytosol	20.96	48.06
VIT_12s0055g00810.t01	Wine grape	extracellular	22.5	45.2
VIT_12s0059g02410.t01	Wine grape	extracellular	22.19	43.9
VIT_07s0104g01100.t01	Wine grape	extracellular	21.73	43.65
VIT_10s0116g00340.t01	Wine grape	extracellular	21.42	42.64
VIT_05s0020g02110.t01	Wine grape	plastid	14.02	35.27

Protein Annotations

KEGG:00940+1.11.1.7	Gene3D:1.10.420.10	Gene3D:1.10.520.10	EntrezGene:100255891	wikigene:100255891	EntrezGene:100855242
wikigene:100855242	MapMan:35.1	ProteinID:CCB51584	ProteinID:CCB51584.1	UniProt:F6HH88	EMBL:FN595756
GO:GO:0003674	GO:GO:0003824	GO:GO:0004601	GO:GO:0005488	GO:GO:0005575	GO:GO:0005618
GO:GO:0005623	GO:GO:0006950	GO:GO:0006979	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009505	GO:GO:0009506	GO:GO:0009664	GO:GO:0009987	GO:GO:0016043	GO:GO:0016491
GO:GO:0020037	GO:GO:0030312	GO:GO:0042744	GO:GO:0046872	GO:GO:0055114	GO:GO:0098869
InterPro:Haem_peroxidase	InterPro:Haem_peroxidase_pln/fun/bac	InterPro:IPR002016	EntrezGene:LOC100255891	wikigene:LOC100255891	EntrezGene:LOC100855242
wikigene:LOC100855242	PFAM:PF00141	PRINTS:PR00458	PRINTS:PR00461	ScanProsite:PS00435	PFscan:PS50873
PANTHER:PTHR31235	PANTHER:PTHR31235:SF164	InterPro:Peroxidase_pln	InterPro:Peroxidases_heam-ligand_BS	SUPFAM:SSF48113	InterPro:Secretory_peroxidase
SignalP:SignalP-noTM	UniParc:UPI00021087AA	ArrayExpress:VIT_11s0016g05280	EnsemblPlantsGene:VIT_11s0016g05280	EnsemblPlants:VIT_11s0016g05280.t01	RefSeq:XP_002282106
RefSeq:XP_002282106.1	RefSeq:XP_003633143	RefSeq:XP_003633143.1	:	:	:

Description

Peroxidase [Source:UniProtKB/TrEMBL;Acc:F6HH88]

Coordinates

chr11:-:4611416..4626713

Molecular Weight (calculated)

70128.7 Da

IEP (calculated)

6.201

GRAVY (calculated)

-0.071

Length

649 amino acids

Sequence
(BLAST)

001: MVQMEPKWLV LLVVILGLSW FGETQQGLIP GFYSSSCPKA EAIVSSTVVT HFKKDPTIAA GVLKLHFKDC FFQGCDGLVS EIDALTDTEI RGFGVIDDAK
101: TQLETLCPGV VSCADILALA ARDAVGLSGG PSWPVPTGRR DGRLSFGVSP ENLTLPVPTD SIPVLREKFA AKGLNNHDLV TLIGAHTIGL TDCSSFEYRL
201: YNFTAKGNAD PTINQAFLAQ LRALCPDVGG DVSKKGVPLD KDSQFKFDVS FFKNVRDGNG VLESDQRLFG DSETQRIVKN YAGNGKGLLG LRFYFEFPKA
301: MIKMSSIGRR EPTESFASLF YLLMVQMEPK WLVLLAVILS LFAETQQGLT SGFYSSSCPK AEATVRSTVE THFKQDPTIA AGVLRLHFQD CFVQGCDASI
401: LITEASGETD ALPNAGLRGF DVIDDAKTQL EALCPGVVSC ADILALAARD AVGLSGGPSW SVPTGRRDET NVSSSPDASN FPAPNDSIPV LRQKFADKGL
501: NTNDLVTLVG AHTIGQTNCS VFQYRLYNFT TRGNADPTIN PAFLAQLQAL CPEGGNGSTR VALDTNSQTK FDVNFFKNVR DGNGVLESDQ RLFGDSETRK
601: IVRNYAGNGR GILGLRFYIE FPKAMIKMSS IGVKTGTQGE IRKTCSKSN

Best Arabidopsis Sequence Match ( AT2G41480.1 )
(BLAST)

001: MGVYLGKYCY IMIIMLVLVL GKEVRSQLLK NGYYSTSCPK AESIVRSTVE SHFDSDPTIS PGLLRLHFHD CFVQGCDGSV LIKGKSAEQA ALPNLGLRGL
101: EVIDDAKARL EAVCPGVVSC ADILALAARD SVDLSDGPSW RVPTGRKDGR ISLATEASNL PSPLDSVAVQ KQKFQDKGLD THDLVTLLGA HTIGQTDCLF
201: FRYRLYNFTV TGNSDPTISP SFLTQLKTLC PPNGDGSKRV ALDIGSPSKF DESFFKNLRD GNAILESDQR LWSDAETNAV VKKYASRLRG LLGFRFDYEF
301: GKAMIKMSSI DVKTDVDGEV RKVCSKVN

Arabidopsis Description

PER25Peroxidase 25 [Source:UniProtKB/Swiss-Prot;Acc:O80822]
SUBAcon: [plasma membrane,golgi,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.