Factsheet for VIT_12s0055g01030.t01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
plastid 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_12s0055g01010.t01	Wine grape	plastid	90.12	93.89
VIT_12s0055g01020.t01	Wine grape	plastid	87.65	91.32
VIT_12s0055g01000.t01	Wine grape	plastid	86.73	90.35
VIT_12s0055g00980.t01	Wine grape	extracellular	69.14	75.17
PGSC0003DMT400032789	Potato	extracellular	73.15	71.6
Solyc01g105070.2.1	Tomato	extracellular	71.91	70.18
KRH10519	Soybean	endoplasmic reticulum	68.83	68.62
KRH10518	Soybean	extracellular	67.28	67.7
KRH43912	Soybean	endoplasmic reticulum	67.9	67.69
CDY37007	Canola	extracellular	64.2	65.41
Bra028436.1-P	Field mustard	extracellular	63.58	64.78
AT5G39580.1	Thale cress	extracellular	62.96	63.95
Bra031933.1-P	Field mustard	extracellular	62.04	63.01
Bra024269.1-P	Field mustard	extracellular	63.58	62.8
CDY43791	Canola	extracellular	63.58	62.8
AT5G64120.1	Thale cress	extracellular	63.27	62.5
CDY66486	Canola	extracellular	63.27	62.5
CDY50836	Canola	extracellular	63.27	62.5
CDY39825	Canola	extracellular	62.96	62.2
CDY31334	Canola	extracellular	62.65	62.08
KRH43911	Soybean	extracellular	60.19	60.75
VIT_11s0016g05320.t01	Wine grape	extracellular	59.26	59.26
CDY43790	Canola	extracellular	56.79	55.26
CDY39826	Canola	extracellular, golgi	56.79	55.26
Bra024268.1-P	Field mustard	extracellular	56.79	55.26
CDY31335	Canola	extracellular	56.48	54.95
Bra031934.1-P	Field mustard	extracellular, golgi	56.48	54.95
AT5G64110.1	Thale cress	extracellular	55.86	54.85
AT5G64100.1	Thale cress	extracellular	55.25	54.08
CDX84495	Canola	extracellular	55.56	54.05
CDX84494	Canola	extracellular	54.01	52.4
CDX84491	Canola	extracellular	54.01	52.4
VIT_05s0020g02120.t01	Wine grape	cytosol	41.98	51.91
CDY43789	Canola	extracellular	53.4	51.8
Bra024267.1-P	Field mustard	extracellular	53.4	51.8
VIT_12s0055g00810.t01	Wine grape	extracellular	48.15	48.3
VIT_12s0059g02410.t01	Wine grape	extracellular	46.91	46.34
VIT_10s0116g00340.t01	Wine grape	extracellular	46.6	46.32
VIT_07s0104g01100.t01	Wine grape	extracellular	45.68	45.82
VIT_18s0001g15390.t01	Wine grape	cytosol	39.51	45.23
VIT_05s0020g02110.t01	Wine grape	plastid	29.01	36.43
VIT_11s0016g05280.t01	Wine grape	extracellular	58.33	29.12

Protein Annotations

KEGG:00940+1.11.1.7	Gene3D:1.10.420.10	Gene3D:1.10.520.10	EntrezGene:100262265	wikigene:100262265	MapMan:35.1
EMBL:AM457182	ProteinID:CAN63424	ProteinID:CAN63424.1	ProteinID:CCB46167	ProteinID:CCB46167.1	UniProt:F6H1N5
EMBL:FN595228	GO:GO:0003674	GO:GO:0003824	GO:GO:0004601	GO:GO:0005488	GO:GO:0005575
GO:GO:0005576	GO:GO:0005618	GO:GO:0005623	GO:GO:0006950	GO:GO:0006979	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009505	GO:GO:0009506	GO:GO:0009664	GO:GO:0009987
GO:GO:0016043	GO:GO:0016491	GO:GO:0020037	GO:GO:0030312	GO:GO:0042744	GO:GO:0046872
GO:GO:0055114	GO:GO:0098869	InterPro:Haem_peroxidase	InterPro:Haem_peroxidase_pln/fun/bac	InterPro:IPR002016	EntrezGene:LOC100262265
wikigene:LOC100262265	PFAM:PF00141	PRINTS:PR00458	PRINTS:PR00461	ScanProsite:PS00435	ScanProsite:PS00436
PFscan:PS50873	PANTHER:PTHR31235	PANTHER:PTHR31235:SF160	InterPro:Peroxidase_pln	InterPro:Peroxidases_AS	InterPro:Peroxidases_heam-ligand_BS
SUPFAM:SSF48113	InterPro:Secretory_peroxidase	SignalP:SignalP-noTM	UniParc:UPI00015CBC47	ArrayExpress:VIT_12s0055g01030	EnsemblPlantsGene:VIT_12s0055g01030
EnsemblPlants:VIT_12s0055g01030.t01	unigene:Vvi.24071	RefSeq:XP_002272847	RefSeq:XP_002272847.1	SEG:seg	:

Description

Peroxidase [Source:UniProtKB/TrEMBL;Acc:F6H1N5]

Coordinates

chr12:+:14512957..14514224

Molecular Weight (calculated)

34865.4 Da

IEP (calculated)

7.987

GRAVY (calculated)

-0.145

Length

324 amino acids

Sequence
(BLAST)

001: METSSFLFLL LIATAAAFVQ GQGTRVGFYS RTCPQAESIV QKTVQSHFQS NPAIAPGLLR MHFHDCFVQG CDASILIDGS STEKTAGPNR LLRGYDVIDD
101: AKTQLEAACP GVVSCADILA LAARDSVVLT KGLMWKVPTG RRDGRVSLAS DVNNLPGPRD SVEVQKQKFA DKGLNDQDLV TLVGGHTIGT SACQAFRYRL
201: YNFSTTTANG ADPSMDATFV TQLQALCPAD GDASRRIALD TGSSDTFDAS FFTNLKNGRG VLESDQKLWT DASTKTLVQR FLGVRGLRGL NFNVEFGRSM
301: VKMSNIGVKT GTEGEIRKLC SANN

Best Arabidopsis Sequence Match ( AT5G64120.1 )
(BLAST)

001: MGLVRSLCLL ITFLNCLIIS VHGQATARPG PVSGTRIGFY LTTCPRAETI VRNAVNAGFS SDPRIAPGIL RMHFHDCFVQ GCDGSILISG ANTERTAGPN
101: LNLQGFEVID NAKTQLEAAC PGVVSCADIL ALAARDTVIL TQGTGWQVPT GRRDGRVSLA SNANNLPGPR DSVAVQQQKF SALGLNTRDL VVLVGGHTIG
201: TAGCGVFRNR LFNTTGQTAD PTIDPTFLAQ LQTQCPQNGD GSVRVDLDTG SGSTWDTSYY NNLSRGRGVL QSDQVLWTDP ATRPIVQQLM APRSTFNVEF
301: ARSMVRMSNI GVVTGANGEI RRVCSAVN

Arabidopsis Description

PER71Peroxidase [Source:UniProtKB/TrEMBL;Acc:A0A178UAR8]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.