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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • endoplasmic reticulum 5
  • golgi 5
  • extracellular 7
  • plastid 2
  • vacuole 4
  • plasma membrane 4
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY43790 Canola extracellular 82.42 81.68
Bra024268.1-P Field mustard extracellular 82.42 81.68
CDX84495 Canola extracellular 81.82 81.08
AT5G64100.1 Thale cress extracellular 66.36 66.16
VIT_12s0055g01010.t01 Wine grape plastid 55.15 58.52
AT5G64120.1 Thale cress extracellular 56.67 57.01
VIT_12s0055g01030.t01 Wine grape extracellular 54.85 55.86
AT5G39580.1 Thale cress extracellular 53.64 55.49
PGSC0003DMT400032789 Potato extracellular 55.15 54.98
VIT_12s0055g01000.t01 Wine grape plastid 51.52 54.66
Solyc01g105070.2.1 Tomato extracellular 54.85 54.52
KRH43911 Soybean extracellular 52.42 53.89
VIT_12s0055g01020.t01 Wine grape plastid 50.3 53.38
VIT_12s0055g00980.t01 Wine grape extracellular 45.45 50.34
AT2G41480.1 Thale cress extracellular, golgi, plasma membrane 50.0 50.3
AT4G25980.1 Thale cress extracellular, plasma membrane 41.52 42.02
AT1G05240.1 Thale cress extracellular 41.21 41.85
AT1G05250.1 Thale cress extracellular 41.21 41.85
AT1G77100.1 Thale cress extracellular, golgi 39.7 41.07
AT1G05260.1 Thale cress extracellular 39.39 39.88
AT4G11290.1 Thale cress extracellular 38.48 38.96
AT3G01190.1 Thale cress extracellular, golgi, vacuole 37.88 38.94
AT3G21770.1 Thale cress extracellular 36.67 36.78
AT2G39040.1 Thale cress extracellular 38.18 36.0
AT5G15180.1 Thale cress extracellular 35.76 35.87
Protein Annotations
KEGG:00940+1.11.1.7Gene3D:1.10.420.10Gene3D:1.10.520.10MapMan:35.1EntrezGene:836532UniProt:A0A178UNC2
ProteinID:AED97841.1ArrayExpress:AT5G64110EnsemblPlantsGene:AT5G64110RefSeq:AT5G64110TAIR:AT5G64110RefSeq:AT5G64110-TAIR-G
EnsemblPlants:AT5G64110.1TAIR:AT5G64110.1EMBL:AY065173Unigene:At.28572ProteinID:BAB10279.1EMBL:BT003353
GO:GO:0003674GO:GO:0003824GO:GO:0004601GO:GO:0005488GO:GO:0005575GO:GO:0005576
GO:GO:0005618GO:GO:0005623GO:GO:0006950GO:GO:0006979GO:GO:0008150GO:GO:0008152
GO:GO:0009056GO:GO:0009505GO:GO:0009506GO:GO:0009664GO:GO:0009987GO:GO:0016020
GO:GO:0016043GO:GO:0016491GO:GO:0020037GO:GO:0030312GO:GO:0042744GO:GO:0046872
GO:GO:0055114GO:GO:0098869InterPro:Haem_peroxidaseInterPro:Haem_peroxidase_pln/fun/bacInterPro:IPR002016RefSeq:NP_201216.1
ProteinID:OAO94191.1PFAM:PF00141PO:PO:0000037PO:PO:0007616PO:PO:0009006PO:PO:0009025
PO:PO:0009029PRINTS:PR00458PRINTS:PR00461ScanProsite:PS00435ScanProsite:PS00436PFscan:PS50873
PANTHER:PTHR31235PANTHER:PTHR31235:SF27InterPro:Peroxidase_plnInterPro:Peroxidases_ASInterPro:Peroxidases_heam-ligand_BSUniProt:Q9FMI7
SUPFAM:SSF48113InterPro:Secretory_peroxidaseSignalP:SignalP-noTMUniParc:UPI000000BFCD::
Description
PER70Peroxidase [Source:UniProtKB/TrEMBL;Acc:A0A178UNC2]
Coordinates
chr5:-:25654074..25656067
Molecular Weight (calculated)
36139.5 Da
IEP (calculated)
6.974
GRAVY (calculated)
0.061
Length
330 amino acids
Sequence
(BLAST)
001: MRSFTNLNPC YVLLPFFLVL ATNATHTNNF LPRPRTGYYG SACWNVESIV RSVVESNYLA NPANAPGILR MHFHDCFVQG CDASVLLAGP NSERTAIPNL
101: SLRGFNVIEE AKTQLEIACP RTVSCADILA LAARDFVHLA GGPWWPVPLG RLDGRISLAS NVILPGPTDS VAVQKLRFAE KNLNTQDLVV LAAGHTIGTA
201: GCIVFRDRFF NYDNTGSPDP TIAPSFVPLI QAQCPLNGDP ATRVVLDTGS GDQFDTSYLN NLKNGRGLLE SDQVLWTNLE TRPIVERLLG LRFPFLIFGL
301: EFARSMTKMS QIEIKTGLDG EIRRVCSAVN
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.