Factsheet for VIT_12s0055g01010.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_12s0055g01030.t01	Wine grape	extracellular	93.89	90.12
VIT_12s0055g01020.t01	Wine grape	plastid	90.03	90.03
VIT_12s0055g01000.t01	Wine grape	plastid	88.42	88.42
VIT_12s0055g00980.t01	Wine grape	extracellular	70.42	73.49
PGSC0003DMT400032789	Potato	extracellular	76.53	71.9
Solyc01g105070.2.1	Tomato	extracellular	75.56	70.78
KRH10519	Soybean	endoplasmic reticulum	70.74	67.69
KRH10518	Soybean	extracellular	69.45	67.08
KRH43912	Soybean	endoplasmic reticulum	69.77	66.77
CDY37007	Canola	extracellular	67.52	66.04
Bra028436.1-P	Field mustard	extracellular	66.88	65.41
AT5G39580.1	Thale cress	extracellular	66.56	64.89
Bra031933.1-P	Field mustard	extracellular	65.92	64.26
Bra024269.1-P	Field mustard	extracellular	66.88	63.41
CDY50836	Canola	extracellular	66.88	63.41
CDY43791	Canola	extracellular	66.88	63.41
CDY66486	Canola	extracellular	66.56	63.11
CDY39825	Canola	extracellular	66.56	63.11
AT5G64120.1	Thale cress	extracellular	66.24	62.8
CDY31334	Canola	extracellular	65.92	62.69
KRH43911	Soybean	extracellular	62.38	60.44
VIT_11s0016g05320.t01	Wine grape	extracellular	61.41	58.95
CDY43790	Canola	extracellular	59.49	55.56
Bra024268.1-P	Field mustard	extracellular	59.49	55.56
CDY39826	Canola	extracellular, golgi	59.16	55.26
AT5G64110.1	Thale cress	extracellular	58.52	55.15
Bra031934.1-P	Field mustard	extracellular, golgi	58.84	54.95
CDY31335	Canola	extracellular	58.84	54.95
CDX84495	Canola	extracellular	58.2	54.35
AT5G64100.1	Thale cress	extracellular	56.91	53.47
VIT_05s0020g02120.t01	Wine grape	cytosol	44.05	52.29
CDX84494	Canola	extracellular	55.95	52.1
CDX84491	Canola	extracellular	55.95	52.1
CDY43789	Canola	extracellular	55.63	51.8
Bra024267.1-P	Field mustard	extracellular	55.63	51.8
VIT_12s0055g00810.t01	Wine grape	extracellular	48.55	46.75
VIT_18s0001g15390.t01	Wine grape	cytosol	41.48	45.58
VIT_07s0104g01100.t01	Wine grape	extracellular	46.95	45.2
VIT_12s0059g02410.t01	Wine grape	extracellular	47.59	45.12
VIT_10s0116g00340.t01	Wine grape	extracellular	47.27	45.09
VIT_05s0020g02110.t01	Wine grape	plastid	28.3	34.11
VIT_11s0016g05280.t01	Wine grape	extracellular	59.81	28.66

Protein Annotations

KEGG:00940+1.11.1.7	Gene3D:1.10.420.10	Gene3D:1.10.520.10	EntrezGene:100257139	wikigene:100257139	MapMan:35.1
EMBL:AM484505	ProteinID:CAN84000	ProteinID:CAN84000.1	ProteinID:CCB46165	ProteinID:CCB46165.1	UniProt:F6H1N3
EMBL:FN595228	GO:GO:0003674	GO:GO:0003824	GO:GO:0004601	GO:GO:0005488	GO:GO:0005575
GO:GO:0005576	GO:GO:0005618	GO:GO:0005623	GO:GO:0006950	GO:GO:0006979	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009505	GO:GO:0009506	GO:GO:0009664	GO:GO:0009987
GO:GO:0016043	GO:GO:0016491	GO:GO:0020037	GO:GO:0030312	GO:GO:0042744	GO:GO:0046872
GO:GO:0055114	GO:GO:0098869	InterPro:Haem_peroxidase	InterPro:Haem_peroxidase_pln/fun/bac	InterPro:IPR002016	EntrezGene:LOC100257139
wikigene:LOC100257139	PFAM:PF00141	PRINTS:PR00458	PRINTS:PR00461	ScanProsite:PS00435	ScanProsite:PS00436
PFscan:PS50873	PANTHER:PTHR31235	PANTHER:PTHR31235:SF160	InterPro:Peroxidase_pln	InterPro:Peroxidases_AS	InterPro:Peroxidases_heam-ligand_BS
SUPFAM:SSF48113	InterPro:Secretory_peroxidase	UniParc:UPI00021086D3	ArrayExpress:VIT_12s0055g01010	EnsemblPlantsGene:VIT_12s0055g01010	EnsemblPlants:VIT_12s0055g01010.t01
RefSeq:XP_002269172	RefSeq:XP_002269172.2	SEG:seg	:	:	:

Description

Peroxidase [Source:UniProtKB/TrEMBL;Acc:F6H1N3]

Coordinates

chr12:+:14484489..14485898

Molecular Weight (calculated)

33352.7 Da

IEP (calculated)

8.929

GRAVY (calculated)

-0.163

Length

311 amino acids

Sequence
(BLAST)

001: MAAALVQGQG TRVGFYSRTC PQAESIVQKT VNSHFQSNPA IAPGLLRMHF HDCFVQGCDA SILIDGSSTE KTAGPNRLLR GYDVIDDAKT QLEAACPGVV
101: SCADILALAA RDSVVLTKGL VWKVPTGRRD GRVSLASNVN NLPGPRDSVE VQKKKFADKG LNDQDLVTLV GGHTIGTAAC QAFRYRLYNF STTTANGADT
201: SMDATFVTQL QALCPANGDA SRRVALDTGS SNTFDASYFT NLKNGRGVLE SDQRLWTDAS TKTFVQRFLG VRGLLGLNFN LEFGRSMVKM SNIGVKTGTQ
301: GEIRKVCSAI N

Best Arabidopsis Sequence Match ( AT5G64120.1 )
(BLAST)

001: MGLVRSLCLL ITFLNCLIIS VHGQATARPG PVSGTRIGFY LTTCPRAETI VRNAVNAGFS SDPRIAPGIL RMHFHDCFVQ GCDGSILISG ANTERTAGPN
101: LNLQGFEVID NAKTQLEAAC PGVVSCADIL ALAARDTVIL TQGTGWQVPT GRRDGRVSLA SNANNLPGPR DSVAVQQQKF SALGLNTRDL VVLVGGHTIG
201: TAGCGVFRNR LFNTTGQTAD PTIDPTFLAQ LQTQCPQNGD GSVRVDLDTG SGSTWDTSYY NNLSRGRGVL QSDQVLWTDP ATRPIVQQLM APRSTFNVEF
301: ARSMVRMSNI GVVTGANGEI RRVCSAVN

Arabidopsis Description

PER71Peroxidase [Source:UniProtKB/TrEMBL;Acc:A0A178UAR8]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.