CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 7
endoplasmic reticulum 6
vacuole 5
plasma membrane 5
golgi 5
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	extracellular

endoplasmic reticulum: 23041469

msms PMID: 23041469 doi

S Komatsu, R Kuji, Y Nanjo, S Hiraga, K Furukawa

National Institute of Crop Science, Tsukuba 305-8518, Japan. skomatsu@affrc.go.jp

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH43912	Soybean	endoplasmic reticulum	96.0	96.0
KRH10518	Soybean	extracellular	85.85	86.65
PGSC0003DMT400032789	Potato	extracellular	73.23	71.9
Solyc01g105070.2.1	Tomato	extracellular	73.23	71.69
VIT_12s0055g01010.t01	Wine grape	plastid	67.69	70.74
VIT_12s0055g01030.t01	Wine grape	extracellular	68.62	68.83
VIT_12s0055g01020.t01	Wine grape	plastid	65.23	68.17
VIT_12s0055g01000.t01	Wine grape	plastid	65.23	68.17
KRH43911	Soybean	extracellular	65.85	66.67
VIT_12s0055g00980.t01	Wine grape	extracellular	56.92	62.08
KRH54959	Soybean	extracellular	60.31	60.68
KRH20268	Soybean	extracellular, golgi, mitochondrion, plasma membrane	60.92	57.06
KRH10491	Soybean	extracellular	49.23	49.54
KRH43937	Soybean	extracellular	49.23	49.38
KRH22535	Soybean	extracellular	45.85	45.99
KRH26822	Soybean	endoplasmic reticulum	45.85	45.71
KRH26821	Soybean	endoplasmic reticulum	45.85	45.71
KRH31947	Soybean	extracellular	45.23	45.65
KRH71514	Soybean	extracellular	45.23	45.65
KRH22534	Soybean	extracellular	45.54	45.4
KRH68093	Soybean	endoplasmic reticulum	45.23	45.37
KRH56092	Soybean	extracellular, mitochondrion	44.92	45.06
KRH68092	Soybean	endoplasmic reticulum	44.31	44.72
KRH56093	Soybean	extracellular	44.62	44.62
KRH25412	Soybean	extracellular	43.69	43.83
KRH25410	Soybean	cytosol	26.77	35.37
KRG96357	Soybean	extracellular	20.62	32.84

Protein Annotations

KEGG:00940+1.11.1.7	Gene3D:1.10.420.10	Gene3D:1.10.520.10	EntrezGene:100820620	MapMan:35.1	UniProt:A0A0R4J594
EMBL:ACUP02009147	EnsemblPlantsGene:GLYMA_15G052700	GO:GO:0003674	GO:GO:0003824	GO:GO:0004601	GO:GO:0005488
GO:GO:0005575	GO:GO:0005576	GO:GO:0006950	GO:GO:0006979	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009987	GO:GO:0016491	GO:GO:0020037	GO:GO:0042744	GO:GO:0046872
GO:GO:0055114	GO:GO:0098869	InterPro:Haem_peroxidase	InterPro:Haem_peroxidase_pln/fun/bac	InterPro:IPR002016	EnsemblPlants:KRH10519
ProteinID:KRH10519	ProteinID:KRH10519.1	PFAM:PF00141	PRINTS:PR00458	PRINTS:PR00461	ScanProsite:PS00435
ScanProsite:PS00436	PFscan:PS50873	PANTHER:PTHR31235	PANTHER:PTHR31235:SF27	MetaCyc:PWY-5461	MetaCyc:PWY-5466
MetaCyc:PWY-5469	MetaCyc:PWY-6824	MetaCyc:PWY-7214	MetaCyc:PWY-7445	InterPro:Peroxidase_pln	InterPro:Peroxidases_AS
InterPro:Peroxidases_heam-ligand_BS	SUPFAM:SSF48113	InterPro:Secretory_peroxidase	SignalP:SignalP-noTM	UniParc:UPI000189D2CE	SEG:seg

Description

hypothetical protein

Coordinates

chr15:-:4147574..4149546

Molecular Weight (calculated)

34868.5 Da

IEP (calculated)

7.989

GRAVY (calculated)

-0.031

Length

325 amino acids

Sequence
(BLAST)

001: MEERSLYSLV FLVLALAIVN KVHGQGTRVG FYSSTCPRAE SIVKSTVTTH VNSDSTLAAG LLRMHFHDCF VQGCDASVLI AGSGTERTAF ANLGLRGFEV
101: IDDAKKQLEA ACPGVVSCAD ILALAARDSV VLSGGLSYQV LTGRRDGRIS QASDVSNLPA PFDSVDVQKQ KFTAKGLNTQ DLVTLVGAHT IGTTACQFFS
201: NRLYNFTANG PDPSIDPSFL SQLQSLCPQN GDGSKRVALD TGSQTKFDLS YYSNLRNSRG ILQSDQALWS DASTKTTVQR YLGLIRGLLG LTFNVEFGKS
301: MVKMGNIELK TGTDGEIRKI CSAIN

Best Arabidopsis Sequence Match ( AT2G41480.1 )
(BLAST)

001: MGVYLGKYCY IMIIMLVLVL GKEVRSQLLK NGYYSTSCPK AESIVRSTVE SHFDSDPTIS PGLLRLHFHD CFVQGCDGSV LIKGKSAEQA ALPNLGLRGL
101: EVIDDAKARL EAVCPGVVSC ADILALAARD SVDLSDGPSW RVPTGRKDGR ISLATEASNL PSPLDSVAVQ KQKFQDKGLD THDLVTLLGA HTIGQTDCLF
201: FRYRLYNFTV TGNSDPTISP SFLTQLKTLC PPNGDGSKRV ALDIGSPSKF DESFFKNLRD GNAILESDQR LWSDAETNAV VKKYASRLRG LLGFRFDYEF
301: GKAMIKMSSI DVKTDVDGEV RKVCSKVN

Arabidopsis Description

PER25Peroxidase 25 [Source:UniProtKB/Swiss-Prot;Acc:O80822]
SUBAcon: [plasma membrane,golgi,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.