CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	extracellular

extracellular: 22945350
endoplasmic reticulum: 23041469
endoplasmic reticulum: 27224218

msms PMID: 22945350 doi

C Liao, F Hochholdinger, C Li

Key Laboratory of Plant-Soil Interactions, Ministry of Education, Center for Resources, Environment and Food Security, China Agricultural University, Beijing, China.

msms PMID: 23041469 doi

S Komatsu, R Kuji, Y Nanjo, S Hiraga, K Furukawa

National Institute of Crop Science, Tsukuba 305-8518, Japan. skomatsu@affrc.go.jp

msms PMID: 27224218 doi

X Wang, S Komatsu

Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH68092	Soybean	endoplasmic reticulum	88.58	89.13
KRH31947	Soybean	extracellular	80.86	81.37
KRH71514	Soybean	extracellular	79.32	79.81
VIT_07s0104g01100.t01	Wine grape	extracellular	73.46	73.68
KRG96357	Soybean	extracellular	46.3	73.53
PGSC0003DMT400058799	Potato	extracellular	69.14	68.92
Solyc01g067850.2.1	Tomato	extracellular	68.52	68.52
GSMUA_Achr9P30910_001	Banana	extracellular	62.04	62.23
GSMUA_Achr9P28660_001	Banana	extracellular	39.2	61.95
GSMUA_Achr2P02440_001	Banana	extracellular	60.19	59.45
TraesCS6A01G324200.1	Wheat	extracellular, nucleus, unclear	57.41	55.86
GSMUA_Achr11P...	Banana	extracellular, golgi, mitochondrion, plastid	62.04	55.68
TraesCS6B01G354600.1	Wheat	extracellular, unclear	57.1	55.56
KRH26822	Soybean	endoplasmic reticulum	54.94	54.6
TraesCS6D01G303900.1	Wheat	golgi	57.72	54.52
KRH26821	Soybean	endoplasmic reticulum	54.63	54.29
KRH22535	Soybean	extracellular	54.01	54.01
KRH22534	Soybean	extracellular	54.01	53.68
KRH56093	Soybean	extracellular	53.4	53.23
KRH56092	Soybean	extracellular, mitochondrion	51.54	51.54
KRH25412	Soybean	extracellular	50.93	50.93
AT2G39040.1	Thale cress	extracellular	52.78	48.86
CDY14412	Canola	extracellular, golgi	53.4	48.19
CDY07679	Canola	endoplasmic reticulum, extracellular, golgi	53.4	48.19
Bra000113.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi	53.09	47.78
KRH10518	Soybean	extracellular	45.06	45.34
KRH10519	Soybean	endoplasmic reticulum	45.37	45.23
KRH43912	Soybean	endoplasmic reticulum	44.44	44.31
KRH43911	Soybean	extracellular	43.83	44.24
KRH54959	Soybean	extracellular	41.98	42.11
KRH25410	Soybean	cytosol	31.17	41.06
KRH10491	Soybean	extracellular	38.58	38.7
KRH20268	Soybean	extracellular, golgi, mitochondrion, plasma membrane	41.36	38.62
KRH43937	Soybean	extracellular	38.58	38.58

Protein Annotations

KEGG:00940+1.11.1.7	Gene3D:1.10.420.10	Gene3D:1.10.520.10	EntrezGene:100775970	MapMan:35.1	UniProt:A0A0R0KM06
EMBL:ACUP02002098	EnsemblPlantsGene:GLYMA_03G208200	GO:GO:0003674	GO:GO:0003824	GO:GO:0004601	GO:GO:0005488
GO:GO:0005575	GO:GO:0005576	GO:GO:0005618	GO:GO:0005623	GO:GO:0006950	GO:GO:0006979
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009505	GO:GO:0009506	GO:GO:0009664
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0016491	GO:GO:0020037
GO:GO:0030312	GO:GO:0042744	GO:GO:0046872	GO:GO:0055114	GO:GO:0098869	InterPro:Haem_peroxidase
InterPro:Haem_peroxidase_pln/fun/bac	InterPro:IPR002016	EnsemblPlants:KRH68093	ProteinID:KRH68093	ProteinID:KRH68093.1	PFAM:PF00141
PRINTS:PR00458	PRINTS:PR00461	ScanProsite:PS00435	PFscan:PS50873	PANTHER:PTHR31235	PANTHER:PTHR31235:SF43
MetaCyc:PWY-5461	MetaCyc:PWY-5466	MetaCyc:PWY-5469	MetaCyc:PWY-6824	MetaCyc:PWY-7214	MetaCyc:PWY-7445
InterPro:Peroxidase_pln	InterPro:Peroxidases_heam-ligand_BS	SUPFAM:SSF48113	InterPro:Secretory_peroxidase	SignalP:SignalP-noTM	TMHMM:TMhelix
UniParc:UPI0006EDFE1B	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:-:41520648..41522516

Molecular Weight (calculated)

35505.6 Da

IEP (calculated)

8.208

GRAVY (calculated)

-0.110

Length

324 amino acids

Sequence
(BLAST)

001: MKMRFFLVAC LAVFCILGVC QGGNLRKKFY KKTCPQAEEI VRTKIQEHVS ARPDLPAKLI RMHFHDCFVR GCDGSVLLDS TATNTAEKDS IPNLSLAGFD
101: VIDDIKEALE AKCPGTVSCA DILALAARDT VSVKFNKPTW EVLTGRRDGT VSISGEALAN LPAPFFNFTQ LKESFASKGL TVHDLVVLSG AHTIGIGHCN
201: LFSNRLFNFT GKGDQDPSLN PTYANFLKTK CQGLSDTTTT VEMDPNSSNT FDSDYYSILR QNKGLFQSDA ALLTTKISRN IVNELVNQNK FFTEFGQSMK
301: RMGAIEVLTG SAGEIRKKCS VVNS

Best Arabidopsis Sequence Match ( AT2G39040.1 )
(BLAST)

001: MANKSLEIRF LFPLVLFLVV KLLCVDGKGF NNNGHKIRKG RWEGKLKMNF YHNSCPGAED IVRQIVWKKV EANRSLAPKL LRVHYHDCFV RGCDASLLLD
101: SVAGKAVSEK EARPNLSLSG FEIIDEIKYI LEKRCPNTVS CADILTLAAR DAVSYEFERP LWNVFTGRVD GRVSLATEAA RDLPSAGANF TTLQKLFAES
201: DLDVVDLVAL SGAHTIGIAH CGVFGRRLLN FTGKGDTDPS LNPSYASFLK SECSDKSLRL NPSAVVGMDP TGPLAFDSGY FVSLLKNKGL FTSDAALLTD
301: PSAAHIASVF QNSGAFLAQF GRSMIKMSSI KVLTLGDQGG EIRKNCRLVN

Arabidopsis Description

PER24Peroxidase 24 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZV04]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.