Factsheet for TraesCS6D01G303900.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	extracellular

golgi: 25769308
unclear: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G354600.1	Wheat	extracellular, unclear	95.34	98.2
TraesCS6A01G324200.1	Wheat	extracellular, nucleus, unclear	95.34	98.2
VIT_07s0104g01100.t01	Wine grape	extracellular	55.69	59.13
PGSC0003DMT400058799	Potato	extracellular	55.98	59.08
Solyc01g067850.2.1	Tomato	extracellular	55.69	58.95
KRH71514	Soybean	extracellular	54.81	58.39
KRH31947	Soybean	extracellular	54.52	58.07
KRH68092	Soybean	endoplasmic reticulum	54.52	58.07
KRH68093	Soybean	endoplasmic reticulum	54.52	57.72
GSMUA_Achr11P...	Banana	extracellular, golgi, mitochondrion, plastid	59.48	56.51
TraesCS5D01G110100.1	Wheat	extracellular	51.9	53.78
TraesCS7D01G442300.1	Wheat	extracellular	48.98	50.6
TraesCS1D01G318400.1	Wheat	extracellular, mitochondrion	40.82	49.47
TraesCS1D01G317700.1	Wheat	extracellular	46.06	48.47
TraesCS7D01G442200.1	Wheat	extracellular	46.65	48.19
TraesCS1D01G318100.1	Wheat	extracellular	44.9	47.09
TraesCS1D01G318600.1	Wheat	extracellular	44.9	47.09
TraesCS1D01G318200.1	Wheat	extracellular	44.9	47.09
TraesCS1D01G318000.1	Wheat	extracellular	44.9	47.09
TraesCS1D01G317900.1	Wheat	extracellular	44.9	47.09
TraesCS1D01G317800.1	Wheat	extracellular	44.9	47.09
TraesCS1D01G318700.1	Wheat	extracellular	44.31	46.63
TraesCS7D01G195100.1	Wheat	extracellular	44.02	46.6
TraesCS1D01G318300.1	Wheat	extracellular	42.86	46.52
TraesCS7D01G195400.1	Wheat	extracellular	44.61	46.5
TraesCS7D01G223900.1	Wheat	extracellular	43.73	46.3
TraesCS7D01G195000.1	Wheat	extracellular	44.31	46.2
AT2G39040.1	Thale cress	extracellular	46.94	46.0
TraesCS1D01G354100.1	Wheat	extracellular	43.44	45.99
TraesCS7D01G195700.1	Wheat	extracellular	44.31	45.92
TraesCS7D01G195500.1	Wheat	extracellular	44.02	45.76
Bra000113.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi	47.81	45.56
TraesCS7D01G195200.1	Wheat	extracellular	43.73	45.45
CDY14412	Canola	extracellular, golgi	47.52	45.4
CDY07679	Canola	endoplasmic reticulum, extracellular, golgi	47.23	45.13
TraesCS4D01G173000.1	Wheat	extracellular, plasma membrane	44.61	44.74
TraesCS3D01G189900.1	Wheat	extracellular	44.02	44.67
TraesCS2D01G265100.1	Wheat	extracellular, vacuole	42.86	43.62
TraesCS7D01G253200.1	Wheat	extracellular	40.52	43.03
TraesCS6D01G125500.1	Wheat	extracellular	42.86	42.73
TraesCS2D01G476200.2	Wheat	extracellular	41.69	42.69
KRG96357	Soybean	extracellular	25.36	42.65
TraesCS1D01G318500.1	Wheat	extracellular	32.36	41.89
TraesCS2D01G265400.1	Wheat	mitochondrion	39.36	40.42
TraesCS2D01G265000.1	Wheat	mitochondrion	40.52	39.27
TraesCS3D01G318500.1	Wheat	extracellular	37.61	38.51
TraesCS2D01G451200.1	Wheat	extracellular	40.52	38.4
TraesCS1D01G318800.1	Wheat	extracellular, golgi, vacuole	37.32	38.21
TraesCS3D01G130800.1	Wheat	extracellular	35.86	37.73
TraesCS4D01G102600.1	Wheat	extracellular	36.15	37.69
TraesCS2D01G352500.1	Wheat	extracellular	35.28	36.78

Protein Annotations

KEGG:00940+1.11.1.7	Gene3D:1.10.420.10	Gene3D:1.10.520.10	MapMan:35.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004601	GO:GO:0005488	GO:GO:0006950	GO:GO:0006979	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009987	GO:GO:0020037	GO:GO:0042744	GO:GO:0055114	InterPro:Haem_peroxidase
InterPro:Haem_peroxidase_pln/fun/bac	InterPro:IPR002016	PFAM:PF00141	PRINTS:PR00458	PRINTS:PR00461	ScanProsite:PS00435
ScanProsite:PS00436	PFscan:PS50873	PANTHER:PTHR31235	PANTHER:PTHR31235:SF65	InterPro:Peroxidase_pln	InterPro:Peroxidases_AS
InterPro:Peroxidases_heam-ligand_BS	SUPFAM:SSF48113	InterPro:Secretory_peroxidase	SignalP:SignalP-noTM	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS6D01G303900
EnsemblPlants:TraesCS6D01G303900.1	TIGR:cd00693	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr6D:-:412314485..412317643

Molecular Weight (calculated)

36616.7 Da

IEP (calculated)

8.323

GRAVY (calculated)

-0.066

Length

343 amino acids

Sequence
(BLAST)

001: MFGGSLGNNM MKGMVCLVAV ALVVAGSASI AAAQAAGLKK GFYKKSCPQA EDIAQKVVWK HVAGNRELAA KFLRMFFHDC FVRGCDASVL LDSPTNTAEK
101: DAPPNLSLAG FEVIDEVKAA LERACPGVVS CADIVALAAR DSVSFQYGKK LWEVETGRRD GTVSSDTQAL NEIPAPSSTF DILLTNFSGK GLGLQDLVVL
201: SGGHTIGIGN CNLFSSRLFN FTGKNNPTDT DPSLNPPYAK FLQGQCRRNL QAPNDNTTVV PMDPGSSTSF DSHYFVNLKA RQGMFTSDAT LLTNSRAAAL
301: VDKLQDNGVF FDHFKNSIKR MGQIGVLTGA SGQIRNKCNV VNS

Best Arabidopsis Sequence Match ( AT2G39040.1 )
(BLAST)

001: MANKSLEIRF LFPLVLFLVV KLLCVDGKGF NNNGHKIRKG RWEGKLKMNF YHNSCPGAED IVRQIVWKKV EANRSLAPKL LRVHYHDCFV RGCDASLLLD
101: SVAGKAVSEK EARPNLSLSG FEIIDEIKYI LEKRCPNTVS CADILTLAAR DAVSYEFERP LWNVFTGRVD GRVSLATEAA RDLPSAGANF TTLQKLFAES
201: DLDVVDLVAL SGAHTIGIAH CGVFGRRLLN FTGKGDTDPS LNPSYASFLK SECSDKSLRL NPSAVVGMDP TGPLAFDSGY FVSLLKNKGL FTSDAALLTD
301: PSAAHIASVF QNSGAFLAQF GRSMIKMSSI KVLTLGDQGG EIRKNCRLVN

Arabidopsis Description

PER24Peroxidase 24 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZV04]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.