CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 5
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

extracellular: 22945350
endoplasmic reticulum: 28499913

msms PMID: 22945350 doi

C Liao, F Hochholdinger, C Li

Key Laboratory of Plant-Soil Interactions, Ministry of Education, Center for Resources, Environment and Food Security, China Agricultural University, Beijing, China.

msms PMID: 28499913 doi

S Komatsu, X Wang, X Yin, Y Nanjo, H Ohyanagi, K Sakata

Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH71514	Soybean	extracellular	94.41	94.41
KRH68093	Soybean	endoplasmic reticulum	81.37	80.86
KRH68092	Soybean	endoplasmic reticulum	75.47	75.47
VIT_07s0104g01100.t01	Wine grape	extracellular	74.22	73.99
PGSC0003DMT400058799	Potato	extracellular	68.32	67.69
Solyc01g067850.2.1	Tomato	extracellular	67.7	67.28
KRG96357	Soybean	extracellular	40.37	63.73
GSMUA_Achr9P30910_001	Banana	extracellular	60.56	60.37
GSMUA_Achr2P02440_001	Banana	extracellular	61.18	60.06
GSMUA_Achr9P28660_001	Banana	extracellular	37.89	59.51
TraesCS6A01G324200.1	Wheat	extracellular, nucleus, unclear	58.07	56.16
TraesCS6B01G354600.1	Wheat	extracellular, unclear	58.07	56.16
GSMUA_Achr11P...	Banana	extracellular, golgi, mitochondrion, plastid	61.49	54.85
KRH26822	Soybean	endoplasmic reticulum	55.28	54.6
TraesCS6D01G303900.1	Wheat	golgi	58.07	54.52
KRH22535	Soybean	extracellular	54.66	54.32
KRH26821	Soybean	endoplasmic reticulum	54.97	54.29
KRH22534	Soybean	extracellular	54.35	53.68
KRH56093	Soybean	extracellular	52.17	51.69
KRH56092	Soybean	extracellular, mitochondrion	50.0	49.69
CDY07679	Canola	endoplasmic reticulum, extracellular, golgi	54.04	48.47
CDY14412	Canola	extracellular, golgi	54.04	48.47
KRH25412	Soybean	extracellular	48.76	48.46
AT2G39040.1	Thale cress	extracellular	52.48	48.29
Bra000113.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi	53.73	48.06
KRH10518	Soybean	extracellular	45.34	45.34
KRH10519	Soybean	endoplasmic reticulum	45.65	45.23
KRH43912	Soybean	endoplasmic reticulum	45.03	44.62
KRH25410	Soybean	cytosol	31.99	41.87
KRH54959	Soybean	extracellular	41.93	41.8
KRH43911	Soybean	extracellular	41.61	41.74
KRH20268	Soybean	extracellular, golgi, mitochondrion, plasma membrane	41.61	38.62
KRH10491	Soybean	extracellular	38.2	38.08
KRH43937	Soybean	extracellular	37.58	37.35

Protein Annotations

KEGG:00940+1.11.1.7	Gene3D:1.10.420.10	Gene3D:1.10.520.10	EntrezGene:100799691	MapMan:35.1	EMBL:ACUP02006091
EnsemblPlantsGene:GLYMA_10G022500	GO:GO:0003674	GO:GO:0003824	GO:GO:0004601	GO:GO:0005488	GO:GO:0005575
GO:GO:0005576	GO:GO:0005618	GO:GO:0005623	GO:GO:0006950	GO:GO:0006979	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009505	GO:GO:0009506	GO:GO:0009664	GO:GO:0009987
GO:GO:0016043	GO:GO:0016491	GO:GO:0020037	GO:GO:0030312	GO:GO:0042744	GO:GO:0046872
GO:GO:0055114	GO:GO:0098869	InterPro:Haem_peroxidase	InterPro:Haem_peroxidase_pln/fun/bac	UniProt:I1L7Z5	InterPro:IPR002016
EnsemblPlants:KRH31947	ProteinID:KRH31947	ProteinID:KRH31947.1	PFAM:PF00141	PRINTS:PR00458	PRINTS:PR00461
ScanProsite:PS00435	PFscan:PS50873	PANTHER:PTHR31235	PANTHER:PTHR31235:SF43	MetaCyc:PWY-5461	MetaCyc:PWY-5466
MetaCyc:PWY-5469	MetaCyc:PWY-6824	MetaCyc:PWY-7214	MetaCyc:PWY-7445	InterPro:Peroxidase_pln	InterPro:Peroxidases_heam-ligand_BS
SUPFAM:SSF48113	InterPro:Secretory_peroxidase	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000233C66D	SEG:seg

Description

hypothetical protein

Coordinates

chr10:+:1953439..1955366

Molecular Weight (calculated)

35104.8 Da

IEP (calculated)

6.244

GRAVY (calculated)

-0.146

Length

322 amino acids

Sequence
(BLAST)

001: MKISILLCVV LLGFLGVCQG GSLRKKFYRD SCPQAEDIIK TKTQQHVSAN PDLPAKLLRM HFHDCFVRGC DASVLLNSTA SNTAERDAIP NLSLAGFDVI
101: DDIKSAVEAK CSKTVSCADI LALAARDAVS VQFNKPMWEV LTGRRDGTVS NSNEALANIP APFFNFTQLK ESFAGKGLTL HDLVVLSGAH TIGIGHCNLF
201: SNRLYNFTGK GDQDPSLNTT YAEFLKTKCQ SLSDTTTTVE MDPGSSTKFD SDYYPNLLQN KGLFQSDAAL LTQEQSEDIA KELVDQNKFF TEFAQSMKRM
301: GAIEVLTGSA GEIRNKCSVV NS

Best Arabidopsis Sequence Match ( AT2G39040.1 )
(BLAST)

001: MANKSLEIRF LFPLVLFLVV KLLCVDGKGF NNNGHKIRKG RWEGKLKMNF YHNSCPGAED IVRQIVWKKV EANRSLAPKL LRVHYHDCFV RGCDASLLLD
101: SVAGKAVSEK EARPNLSLSG FEIIDEIKYI LEKRCPNTVS CADILTLAAR DAVSYEFERP LWNVFTGRVD GRVSLATEAA RDLPSAGANF TTLQKLFAES
201: DLDVVDLVAL SGAHTIGIAH CGVFGRRLLN FTGKGDTDPS LNPSYASFLK SECSDKSLRL NPSAVVGMDP TGPLAFDSGY FVSLLKNKGL FTSDAALLTD
301: PSAAHIASVF QNSGAFLAQF GRSMIKMSSI KVLTLGDQGG EIRKNCRLVN

Arabidopsis Description

PER24Peroxidase 24 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZV04]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.