Factsheet for PGSC0003DMT400013504

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 2
extracellular 7
golgi 4
plasma membrane 4
endoplasmic reticulum 4
vacuole 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	plastid
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400075691

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G05260.1	PGSC0003DMT400075691	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400038889	Potato	extracellular	97.25	97.25
Solyc05g046020.2.1	Tomato	extracellular	96.64	96.64
Solyc05g046030.2.1	Tomato	extracellular	96.33	96.33
PGSC0003DMT400013520	Potato	extracellular	89.91	89.91
PGSC0003DMT400065516	Potato	extracellular	82.26	81.76
PGSC0003DMT400065517	Potato	extracellular	82.26	81.76
PGSC0003DMT400001848	Potato	extracellular	78.59	77.64
PGSC0003DMT400065518	Potato	extracellular	76.15	75.91
Bra032474.1-P	Field mustard	extracellular	60.55	68.99
CDY10037	Canola	extracellular	67.89	68.1
CDY38641	Canola	extracellular	67.89	68.1
Bra031309.1-P	Field mustard	extracellular	67.89	68.1
CDY59800	Canola	extracellular	67.58	67.79
Bra023862.1-P	Field mustard	vacuole	68.2	67.78
CDY55649	Canola	vacuole	68.2	67.78
KRH26821	Soybean	endoplasmic reticulum	67.28	67.48
CDY46845	Canola	extracellular	67.28	67.48
Bra015404.1-P	Field mustard	extracellular	67.28	67.48
CDY19299	Canola	vacuole	67.89	67.48
KRH22535	Soybean	extracellular	66.67	67.28
KRH26822	Soybean	endoplasmic reticulum	66.97	67.18
KRH22534	Soybean	extracellular	66.97	67.18
AT1G05260.1	Thale cress	extracellular	66.67	66.87
AT3G21770.1	Thale cress	extracellular	66.97	66.57
KRH56093	Soybean	extracellular	65.75	66.15
Bra035235.1-P	Field mustard	extracellular	65.44	65.64
CDX86795	Canola	extracellular	65.44	65.64
CDY49518	Canola	extracellular	65.44	65.64
GSMUA_Achr2P03020_001	Banana	extracellular	60.86	65.46
CDY13252	Canola	extracellular	65.14	65.34
AT4G11290.1	Thale cress	extracellular	64.22	64.42
KRH25412	Soybean	extracellular	63.61	64.2
GSMUA_Achr9P30170_001	Banana	extracellular	57.49	63.51
KRH56092	Soybean	extracellular, mitochondrion	62.69	63.27
EER88826	Sorghum	extracellular	62.39	61.63
CDY33143	Canola	extracellular	67.89	60.82
TraesCS7B01G353200.1	Wheat	extracellular	61.16	60.42
TraesCS7D01G442300.1	Wheat	extracellular	61.16	60.24
TraesCS7A01G453000.1	Wheat	extracellular	60.55	59.82
HORVU7Hr1G102480.7	Barley	extracellular	61.47	59.47
TraesCS7A01G452900.1	Wheat	extracellular	59.63	58.73
TraesCS7D01G442200.1	Wheat	extracellular	59.33	58.43
Os06t0681600-01	Rice	extracellular	58.72	56.97
Zm00001d014467_P002	Maize	vacuole	62.39	56.51
PGSC0003DMT400062520	Potato	extracellular	54.13	54.97
PGSC0003DMT400062533	Potato	extracellular	53.82	54.66
PGSC0003DMT400062515	Potato	extracellular	54.13	54.63
KRH25410	Soybean	cytosol	40.98	54.47
PGSC0003DMT400013503	Potato	extracellular	53.21	54.04
PGSC0003DMT400056119	Potato	extracellular	53.52	53.35
TraesCS6A01G136500.1	Wheat	extracellular	53.21	53.21
PGSC0003DMT400058799	Potato	extracellular	52.6	52.92
TraesCS7B01G353100.1	Wheat	extracellular	59.33	52.86
CDY10042	Canola	extracellular	25.99	52.47
TraesCS6B01G164400.2	Wheat	extracellular	54.13	51.6
TraesCS6D01G125500.1	Wheat	extracellular	54.13	51.45
HORVU6Hr1G026230.5	Barley	extracellular	52.6	50.0
Os02t0161800-01	Rice	extracellular, mitochondrion	52.91	49.71
EES06321	Sorghum	extracellular, golgi, plastid	53.21	49.43
PGSC0003DMT400054080	Potato	extracellular	36.09	48.96
PGSC0003DMT400058807	Potato	extracellular	48.32	48.62
PGSC0003DMT400079041	Potato	cytosol	45.87	48.08
PGSC0003DMT400062534	Potato	extracellular	46.48	45.37
PGSC0003DMT400065498	Potato	extracellular	44.34	44.48
PGSC0003DMT400032789	Potato	extracellular	44.34	43.81
Zm00001d053839_P001	Maize	extracellular	29.66	43.69
PGSC0003DMT400001851	Potato	extracellular	77.68	42.91
PGSC0003DMT400063828	Potato	cytosol, extracellular, nucleus	33.95	40.66
PGSC0003DMT400085904	Potato	extracellular	38.23	38.82

Protein Annotations

KEGG:00940+1.11.1.7	Gene3D:1.10.420.10	Gene3D:1.10.520.10	EntrezGene:102590030	MapMan:35.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0004601	GO:GO:0005488	GO:GO:0005575	GO:GO:0005576	GO:GO:0006950
GO:GO:0006979	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016491
GO:GO:0020037	GO:GO:0042744	GO:GO:0046872	GO:GO:0055114	GO:GO:0098869	InterPro:Haem_peroxidase
InterPro:Haem_peroxidase_pln/fun/bac	InterPro:IPR002016	UniProt:M1A2Y4	PFAM:PF00141	EnsemblPlantsGene:PGSC0003DMG400005273	PGSC:PGSC0003DMG400005273
EnsemblPlants:PGSC0003DMT400013504	PRINTS:PR00458	PRINTS:PR00461	ScanProsite:PS00435	ScanProsite:PS00436	PFscan:PS50873
PANTHER:PTHR31235	PANTHER:PTHR31235:SF39	InterPro:Peroxidase_pln	InterPro:Peroxidases_AS	InterPro:Peroxidases_heam-ligand_BS	SUPFAM:SSF48113
InterPro:Secretory_peroxidase	SignalP:SignalP-noTM	UniParc:UPI0002951B82	RefSeq:XP_006356924.1	SEG:seg	:

Description

Peroxidase [Source:PGSC_GENE;Acc:PGSC0003DMG400005273]

Coordinates

chr5:+:42534436..42536130

Molecular Weight (calculated)

35738.7 Da

IEP (calculated)

7.672

GRAVY (calculated)

-0.079

Length

327 amino acids

Sequence
(BLAST)

001: MATFGYLCPL ILMCILVSSN AQLQQNFYAK SCPKAEKIIL DYVHKHIPNA PSLAAALIRM HFHDCFVRGC DASVLLNFTS STGNQTEKFG IPNLTLRGFS
101: FIDNVKKIIE DECPGVVSCA DIVALVARDS VVVTGGPSWS VPTGRRDGRI SNASETLTDI PAPTSNFSTL QNDFAKKGLD LKDLVLLSGA HTIGVSHCSS
201: FSTRLYNFTG TFGTQDPSLD SEYATNLKAN KCKSINDNTT IVEMDPGSFR TFDLSYYKLL LKRRGLFQSD AALTTSTTTK SYIDQLVAGS LKEFYAEFAQ
301: SMEKMGRIEV KTGSDGEIRK HCAVVNS

Best Arabidopsis Sequence Match ( AT1G05260.1 )
(BLAST)

001: MNCLIAIALS VSFFLVGIVG PIQAQLQMNF YANSCPNAEK IVQDFVSNHV SNAPSLAAAL IRMHFHDCFV RGCDGSVLIN STSGNAERDA TPNLTVRGFG
101: FIDAIKSVLE AQCPGIVSCA DIIALASRDA VVFTGGPNWS VPTGRRDGRI SNAAEALANI PPPTSNITNL QTLFANQGLD LKDLVLLSGA HTIGVSHCSS
201: FTNRLYNFTG RGGQDPALDS EYAANLKSRK CPSLNDNKTI VEMDPGSRKT FDLSYYQLVL KRRGLFQSDS ALTTNPTTLS NINRILTGSV GSFFSEFAKS
301: MEKMGRINVK TGSAGVVRRQ CSVANS

Arabidopsis Description

PER3Peroxidase [Source:UniProtKB/TrEMBL;Acc:Q0WSR2]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.