Factsheet for PGSC0003DMT400062534

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400062520	Potato	extracellular	82.69	86.02
PGSC0003DMT400062533	Potato	extracellular	82.39	85.71
Solyc08g075830.2.1	Tomato	extracellular	80.9	84.16
PGSC0003DMT400054080	Potato	extracellular	55.82	77.59
PGSC0003DMT400062515	Potato	extracellular	68.96	71.3
PGSC0003DMT400013503	Potato	extracellular	59.4	61.8
VIT_12s0059g02410.t01	Wine grape	extracellular	58.21	59.45
CDY70734	Canola	extracellular	38.81	55.56
PGSC0003DMT400056119	Potato	extracellular	54.03	55.18
Bra032477.1-P	Field mustard	extracellular	49.25	51.4
CDY65912	Canola	extracellular	49.25	51.4
CDY49516	Canola	extracellular	49.25	51.4
Bra032476.1-P	Field mustard	extracellular	48.96	51.25
CDY69305	Canola	extracellular	48.96	51.09
CDY46843	Canola	extracellular	48.96	51.09
Bra015402.1-P	Field mustard	extracellular	48.66	50.78
CDX75919	Canola	extracellular	48.66	50.31
CDY10038	Canola	extracellular	49.55	50.0
CDY49517	Canola	extracellular	47.46	49.69
CDY46844	Canola	extracellular, golgi	47.16	49.38
CDY10039	Canola	extracellular	47.46	49.23
CDY10040	Canola	extracellular	47.16	49.22
Bra015403.1-P	Field mustard	extracellular	46.87	49.06
AT1G05250.1	Thale cress	extracellular	47.16	48.62
AT1G05240.1	Thale cress	extracellular	47.16	48.62
CDY15537	Canola	extracellular	30.75	48.58
CDY55444	Canola	extracellular	48.06	48.49
Bra032475.1-P	Field mustard	extracellular	45.97	48.28
CDY65910	Canola	extracellular	48.06	47.92
CDY15538	Canola	extracellular	47.46	47.89
Bra030607.1-P	Field mustard	extracellular	47.46	47.89
CDY59801	Canola	extracellular	47.76	47.62
PGSC0003DMT400001848	Potato	extracellular	46.57	47.13
PGSC0003DMT400013520	Potato	extracellular	45.97	47.09
PGSC0003DMT400038889	Potato	extracellular	45.97	47.09
PGSC0003DMT400065518	Potato	extracellular	45.67	46.65
PGSC0003DMT400065516	Potato	extracellular	45.67	46.5
CDY65911	Canola	extracellular	43.58	46.5
PGSC0003DMT400013504	Potato	extracellular	45.37	46.48
PGSC0003DMT400065517	Potato	extracellular	45.07	45.9
Bra030606.1-P	Field mustard	extracellular	46.57	45.88
CDY55446	Canola	extracellular	46.27	45.59
PGSC0003DMT400058799	Potato	extracellular	44.18	45.54
PGSC0003DMT400058807	Potato	extracellular	41.49	42.77
PGSC0003DMT400065498	Potato	extracellular	40.6	41.72
PGSC0003DMT400079041	Potato	cytosol	38.81	41.67
PGSC0003DMT400032789	Potato	extracellular	40.9	41.39
PGSC0003DMT400063828	Potato	cytosol, extracellular, nucleus	30.45	37.36
PGSC0003DMT400085904	Potato	extracellular	34.03	35.4
PGSC0003DMT400001851	Potato	extracellular	46.27	26.18

Protein Annotations

KEGG:00940+1.11.1.7	Gene3D:1.10.420.10	Gene3D:1.10.520.10	MapMan:35.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004601	GO:GO:0005488	GO:GO:0005575	GO:GO:0005576	GO:GO:0006950	GO:GO:0006979
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016491	GO:GO:0020037
GO:GO:0042744	GO:GO:0046872	GO:GO:0055114	GO:GO:0098869	InterPro:Haem_peroxidase	InterPro:Haem_peroxidase_pln/fun/bac
InterPro:IPR002016	UniProt:M1C977	PFAM:PF00141	EnsemblPlantsGene:PGSC0003DMG402024332	PGSC:PGSC0003DMG402024332	EnsemblPlants:PGSC0003DMT400062534
PRINTS:PR00458	PRINTS:PR00461	ScanProsite:PS00435	ScanProsite:PS00436	PFscan:PS50873	PANTHER:PTHR31235
PANTHER:PTHR31235:SF17	InterPro:Peroxidase_pln	InterPro:Peroxidases_AS	InterPro:Peroxidases_heam-ligand_BS	SUPFAM:SSF48113	InterPro:Secretory_peroxidase
SignalP:SignalP-noTM	UniParc:UPI000294EA84	SEG:seg	:	:	:

Description

Peroxidase 27 [Source:PGSC_GENE;Acc:PGSC0003DMG402024332]

Coordinates

chr12:-:6656986..6658371

Molecular Weight (calculated)

37701.3 Da

IEP (calculated)

8.004

GRAVY (calculated)

-0.115

Length

335 amino acids

Sequence
(BLAST)

001: MATLKFLSFL ILQLFLIANN CEGVEVGFYK KTCPNVEAIV KETTKHYISI APTLAAPLLR MHFHDCFVRG IKTEKDAIPN QSLRGFQVID AAKSALEKEC
101: PDIVSCSDIL ALVARDAVSL INGPTWAVPL GRRDGRVSIL SEASKNLPTP FDNFTTLKTI FGALGLNVKD LVVLSGGHTI GMSHCFSFSS RLYNFTGKGD
201: MDPNMDQNYI NHLKIKCKPA DVTTIVEMDP GSFKSFDTNY YSMVSKRRGL FASDAALLTD TQTKDYVLSQ LNPHGSTFFK DFWRIDGENG TNWSPYWESR
301: GNSKTLCLQK LRKNFDELFF LQDFSHFRIF YMSIE

Best Arabidopsis Sequence Match ( AT1G05240.1 )
(BLAST)

001: MAIKNILALV VLLSVVGVSV AIPQLLDLDY YRSKCPKAEE IVRGVTVQYV SRQKTLAAKL LRMHFHDCFV RGCDGSVLLK SAKNDAERDA VPNLTLKGYE
101: VVDAAKTALE RKCPNLISCA DVLALVARDA VAVIGGPWWP VPLGRRDGRI SKLNDALLNL PSPFADIKTL KKNFANKGLN AKDLVVLSGG HTIGISSCAL
201: VNSRLYNFTG KGDSDPSMNP SYVRELKRKC PPTDFRTSLN MDPGSALTFD THYFKVVAQK KGLFTSDSTL LDDIETKNYV QTQAILPPVF SSFNKDFSDS
301: MVKLGFVQIL TGKNGEIRKR CAFPN

Arabidopsis Description

PER1Peroxidase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q67Z07]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.