Factsheet for PGSC0003DMT400001851

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 6
vacuole 5
plasma membrane 5
golgi 5
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	extracellular

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400075691

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G05260.1	PGSC0003DMT400075691	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400001848	Potato	extracellular	54.05	96.68
Solyc07g047740.2.1	Tomato	extracellular	53.04	94.86
Solyc07g049240.2.1	Tomato	extracellular	52.87	94.56
Solyc04g056420.1.1	Tomato	extracellular	39.7	86.08
PGSC0003DMT400065516	Potato	extracellular	45.95	82.67
PGSC0003DMT400065517	Potato	extracellular	45.95	82.67
PGSC0003DMT400013504	Potato	extracellular	42.91	77.68
PGSC0003DMT400038889	Potato	extracellular	42.74	77.37
PGSC0003DMT400013520	Potato	extracellular	40.88	74.01
PGSC0003DMT400065518	Potato	extracellular	40.88	73.78
Bra032474.1-P	Field mustard	extracellular	32.6	67.25
CDY10037	Canola	extracellular	36.99	67.18
CDY59800	Canola	extracellular	36.82	66.87
AT1G05260.1	Thale cress	extracellular	36.66	66.56
CDY49518	Canola	extracellular	36.49	66.26
CDY46845	Canola	extracellular	36.49	66.26
Bra015404.1-P	Field mustard	extracellular	36.49	66.26
CDX86795	Canola	extracellular	36.15	65.64
Bra035235.1-P	Field mustard	extracellular	36.15	65.64
CDY13252	Canola	extracellular	35.98	65.34
KRH26822	Soybean	endoplasmic reticulum	35.81	65.03
GSMUA_Achr2P03020_001	Banana	extracellular	32.94	64.14
CDY55649	Canola	vacuole	35.64	64.13
Bra023862.1-P	Field mustard	vacuole	35.64	64.13
KRH22534	Soybean	extracellular	35.3	64.11
KRH26821	Soybean	endoplasmic reticulum	35.3	64.11
CDY19299	Canola	vacuole	35.47	63.83
CDY38641	Canola	extracellular	35.14	63.8
Bra031309.1-P	Field mustard	extracellular	35.14	63.8
KRH56093	Soybean	extracellular	34.63	63.08
KRH22535	Soybean	extracellular	34.46	62.96
AT3G21770.1	Thale cress	extracellular	34.8	62.61
AT4G11290.1	Thale cress	extracellular	34.29	62.27
GSMUA_Achr9P30170_001	Banana	extracellular	30.41	60.81
KRH56092	Soybean	extracellular, mitochondrion	32.94	60.19
KRH25412	Soybean	extracellular	32.77	59.88
EER88826	Sorghum	extracellular	33.45	59.82
TraesCS7D01G442300.1	Wheat	extracellular	32.26	57.53
TraesCS7A01G453000.1	Wheat	extracellular	32.09	57.4
TraesCS7B01G353200.1	Wheat	extracellular	31.93	57.1
CDY33143	Canola	extracellular	35.14	56.99
TraesCS7A01G452900.1	Wheat	extracellular	31.42	56.02
HORVU7Hr1G102480.7	Barley	extracellular	31.93	55.92
TraesCS7D01G442200.1	Wheat	extracellular	31.25	55.72
PGSC0003DMT400062520	Potato	extracellular	30.24	55.59
PGSC0003DMT400013503	Potato	extracellular	29.9	54.97
PGSC0003DMT400062533	Potato	extracellular	29.9	54.97
CDY10042	Canola	extracellular	15.03	54.94
Os06t0681600-01	Rice	extracellular	31.08	54.6
Zm00001d014467_P002	Maize	vacuole	33.28	54.57
PGSC0003DMT400062515	Potato	extracellular	29.56	54.01
PGSC0003DMT400058799	Potato	extracellular	29.56	53.85
PGSC0003DMT400056119	Potato	extracellular	29.39	53.05
KRH25410	Soybean	cytosol	21.28	51.22
TraesCS7B01G353100.1	Wheat	extracellular	31.42	50.68
PGSC0003DMT400054080	Potato	extracellular	20.44	50.21
TraesCS6A01G136500.1	Wheat	extracellular	27.53	49.85
Os02t0161800-01	Rice	extracellular, mitochondrion	29.05	49.43
PGSC0003DMT400058807	Potato	extracellular	26.86	48.92
TraesCS6D01G125500.1	Wheat	extracellular	28.21	48.55
TraesCS6B01G164400.2	Wheat	extracellular	28.04	48.4
PGSC0003DMT400065498	Potato	extracellular	26.18	47.55
EES06321	Sorghum	extracellular, golgi, plastid	28.21	47.44
PGSC0003DMT400079041	Potato	cytosol	24.83	47.12
HORVU6Hr1G026230.5	Barley	extracellular	27.36	47.09
PGSC0003DMT400032789	Potato	extracellular	26.18	46.83
PGSC0003DMT400062534	Potato	extracellular	26.18	46.27
Zm00001d053839_P001	Maize	extracellular	16.22	43.24
PGSC0003DMT400063828	Potato	cytosol, extracellular, nucleus	19.93	43.22
PGSC0003DMT400085904	Potato	extracellular	22.3	40.99

Protein Annotations

KEGG:00940+1.11.1.7	Gene3D:1.10.420.10	Gene3D:1.10.520.10	MapMan:35.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004601	GO:GO:0005488	GO:GO:0006950	GO:GO:0006979	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009987	GO:GO:0016491	GO:GO:0020037	GO:GO:0042744	GO:GO:0046872
GO:GO:0055114	GO:GO:0098869	InterPro:Haem_peroxidase	InterPro:Haem_peroxidase_pln/fun/bac	InterPro:IPR002016	UniProt:M0ZJ70
PFAM:PF00141	EnsemblPlantsGene:PGSC0003DMG400000694	PGSC:PGSC0003DMG400000694	EnsemblPlants:PGSC0003DMT400001851	PRINTS:PR00458	PRINTS:PR00461
ScanProsite:PS00435	ScanProsite:PS00436	PFscan:PS50873	PANTHER:PTHR31235	PANTHER:PTHR31235:SF39	InterPro:Peroxidase_pln
InterPro:Peroxidases_AS	InterPro:Peroxidases_heam-ligand_BS	SUPFAM:SSF48113	InterPro:Secretory_peroxidase	SignalP:SignalP-TM	UniParc:UPI000294A8D6
SEG:seg	:	:	:	:	:

Description

Peroxidase [Source:PGSC_GENE;Acc:PGSC0003DMG400000694]

Coordinates

chr7:+:44979030..44982593

Molecular Weight (calculated)

63738.5 Da

IEP (calculated)

8.833

GRAVY (calculated)

-0.041

Length

592 amino acids

Sequence
(BLAST)

001: MAKFGDLDNF LVLCILLGIV GSSYGQLQLN FYAKSCPQAE KIIQDYVQKQ IPSAPSLAAA LLRLHFHDCF VRGCDGSVLL NFTSSTKNQT EKVAVPNQTL
101: RGFSFIDGVK KALEAECPGV VSCADIVALV ARDSVVVTGG PYWKVPTGRR DGRISNASEA LANIPPPTSS VSSLQTSFAS KGLDLKDLVL LSGAHTIGVS
201: HCPSFSSRLY NFTGVWGKKD PSLDTEYASN LKMKKCKSIN DNTTIVEMDP GSSSKFDLSY FQLVLKRKGL FQSDAALTTS ATTKSFINEL VQGSLKQFYV
301: EFGLAMEKMG KIEVKTGSAA ALLRLHFHDC FVRGCDGSVL LNFTSSTKNQ TEKVAVPNQT LRGFSFIDGV KKALEAECPG VVSCADIVAL VARDSVVVTG
401: GPYWKVPTGR RDGRISNASE ALANIPPPTS SVSSLQTSFA SKGLDLKDLV LLSGAHTIGV SHCPSFSSRL YNFTGVWGKK DPSLDTEYAS NLKMKKCKSI
501: NDNTTIVEMD PGSSSKFDLS YFQLVLKGKG LFQSDAALTT SATTKSFINE LVQGSLKQFY VEFGLAMEKM GKIEVKTGSA GEIRKHCAAV NT

Best Arabidopsis Sequence Match ( AT1G05260.1 )
(BLAST)

001: MNCLIAIALS VSFFLVGIVG PIQAQLQMNF YANSCPNAEK IVQDFVSNHV SNAPSLAAAL IRMHFHDCFV RGCDGSVLIN STSGNAERDA TPNLTVRGFG
101: FIDAIKSVLE AQCPGIVSCA DIIALASRDA VVFTGGPNWS VPTGRRDGRI SNAAEALANI PPPTSNITNL QTLFANQGLD LKDLVLLSGA HTIGVSHCSS
201: FTNRLYNFTG RGGQDPALDS EYAANLKSRK CPSLNDNKTI VEMDPGSRKT FDLSYYQLVL KRRGLFQSDS ALTTNPTTLS NINRILTGSV GSFFSEFAKS
301: MEKMGRINVK TGSAGVVRRQ CSVANS

Arabidopsis Description

PER3Peroxidase [Source:UniProtKB/TrEMBL;Acc:Q0WSR2]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.