Factsheet for PGSC0003DMT400058807

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
plastid 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g067880.1.1	Tomato	mitochondrion	66.77	83.78
Solyc01g067860.2.1	Tomato	extracellular	81.85	81.1
VIT_05s0020g02120.t01	Wine grape	cytosol	56.92	70.61
Solyc01g067870.2.1	Tomato	extracellular	77.85	67.11
PGSC0003DMT400079041	Potato	cytosol	54.15	56.41
PGSC0003DMT400058799	Potato	extracellular	56.0	56.0
PGSC0003DMT400013520	Potato	extracellular	49.54	49.24
PGSC0003DMT400062520	Potato	extracellular	48.62	49.07
PGSC0003DMT400062533	Potato	extracellular	48.31	48.76
PGSC0003DMT400013504	Potato	extracellular	48.62	48.32
PGSC0003DMT400001848	Potato	extracellular	48.92	48.04
PGSC0003DMT400038889	Potato	extracellular	48.31	48.01
PGSC0003DMT400065516	Potato	extracellular	48.0	47.42
PGSC0003DMT400065518	Potato	extracellular	47.69	47.26
PGSC0003DMT400065517	Potato	extracellular	47.38	46.81
PGSC0003DMT400013503	Potato	extracellular	46.15	46.58
PGSC0003DMT400056119	Potato	extracellular	46.46	46.04
PGSC0003DMT400054080	Potato	extracellular	33.54	45.23
PGSC0003DMT400062515	Potato	extracellular	44.62	44.75
PGSC0003DMT400065498	Potato	extracellular	42.15	42.02
PGSC0003DMT400032789	Potato	extracellular	42.46	41.69
PGSC0003DMT400062534	Potato	extracellular	42.77	41.49
PGSC0003DMT400063828	Potato	cytosol, extracellular, nucleus	33.54	39.93
PGSC0003DMT400085904	Potato	extracellular	36.62	36.96
PGSC0003DMT400001851	Potato	extracellular	48.92	26.86

Protein Annotations

KEGG:00940+1.11.1.7	Gene3D:1.10.420.10	Gene3D:1.10.520.10	EntrezGene:102581669	MapMan:35.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0004601	GO:GO:0005488	GO:GO:0005575	GO:GO:0005576	GO:GO:0006950
GO:GO:0006979	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016491
GO:GO:0020037	GO:GO:0042744	GO:GO:0046872	GO:GO:0055114	GO:GO:0098869	InterPro:Haem_peroxidase
InterPro:Haem_peroxidase_pln/fun/bac	InterPro:IPR002016	UniProt:M1C3C2	PFAM:PF00141	EnsemblPlantsGene:PGSC0003DMG400022850	PGSC:PGSC0003DMG400022850
EnsemblPlants:PGSC0003DMT400058807	PRINTS:PR00458	PRINTS:PR00461	ScanProsite:PS00435	PFscan:PS50873	PANTHER:PTHR31235
PANTHER:PTHR31235:SF65	InterPro:Peroxidase_pln	InterPro:Peroxidases_heam-ligand_BS	SUPFAM:SSF48113	InterPro:Secretory_peroxidase	SignalP:SignalP-noTM
TMHMM:TMhelix	UniParc:UPI00029565BA	RefSeq:XP_006356970.1	:	:	:

Description

Cationic peroxidase isozyme 38K [Source:PGSC_GENE;Acc:PGSC0003DMG400022850]

Coordinates

chr1:+:59968801..59970227

Molecular Weight (calculated)

35443.5 Da

IEP (calculated)

7.842

GRAVY (calculated)

-0.098

Length

325 amino acids

Sequence
(BLAST)

001: MRTQLVLSCL VFVCIVLCEV VAGAGNVLRN NFYKSTRCPN AEQLIRNITW SKAKNDVTLG ARLLRLHYHD CFLRGCDASV LLDTEGTEQS EKEAGPNLSL
101: GGFDVIDDIK RQVEAKCPGI VSCADILALS ARDAVSFPFK TSMWEVETGR KDGNVSLASE VSSNLPLPDS NISTLQQLFA KKGLNVDDLV ALSGAHTIGF
201: AHCGAFSKRL FNFTGKGDMD PSLNATYAES LKKSCTNLAN IVEMDPMSST SFDSNYFNIL INQNKGLFQS DAALLNDTNS VNVVKKLQND KAFFVEFGKS
301: MKKMGAIEVL TGNAGQIRKN CRVKN

Best Arabidopsis Sequence Match ( AT2G39040.1 )
(BLAST)

001: MANKSLEIRF LFPLVLFLVV KLLCVDGKGF NNNGHKIRKG RWEGKLKMNF YHNSCPGAED IVRQIVWKKV EANRSLAPKL LRVHYHDCFV RGCDASLLLD
101: SVAGKAVSEK EARPNLSLSG FEIIDEIKYI LEKRCPNTVS CADILTLAAR DAVSYEFERP LWNVFTGRVD GRVSLATEAA RDLPSAGANF TTLQKLFAES
201: DLDVVDLVAL SGAHTIGIAH CGVFGRRLLN FTGKGDTDPS LNPSYASFLK SECSDKSLRL NPSAVVGMDP TGPLAFDSGY FVSLLKNKGL FTSDAALLTD
301: PSAAHIASVF QNSGAFLAQF GRSMIKMSSI KVLTLGDQGG EIRKNCRLVN

Arabidopsis Description

PER24Peroxidase 24 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZV04]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.