Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 8
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 5
- golgi 5
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Solyc04g008430.1.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G05260.1 | Solyc04g008430.1.1 | AT2G01950.1 | 19000166 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc07g052540.2.1 | Tomato | extracellular | 94.22 | 94.22 |
| Solyc07g052530.2.1 | Tomato | extracellular | 92.71 | 92.71 |
| PGSC0003DMT400065517 | Potato | extracellular | 92.4 | 92.4 |
| PGSC0003DMT400065516 | Potato | extracellular | 91.19 | 91.19 |
| Solyc05g046020.2.1 | Tomato | extracellular | 79.33 | 79.82 |
| Solyc05g046030.2.1 | Tomato | extracellular | 79.03 | 79.51 |
| Solyc07g049240.2.1 | Tomato | extracellular | 78.42 | 77.95 |
| Solyc07g047740.2.1 | Tomato | extracellular | 77.81 | 77.34 |
| Solyc05g046010.2.1 | Tomato | extracellular | 76.6 | 77.06 |
| Solyc07g052510.2.1 | Tomato | extracellular | 73.56 | 73.78 |
| Solyc04g056420.1.1 | Tomato | extracellular | 58.05 | 69.96 |
| Bra032474.1-P | Field mustard | extracellular | 58.36 | 66.9 |
| KRH26822 | Soybean | endoplasmic reticulum | 66.26 | 66.87 |
| CDY10037 | Canola | extracellular | 65.65 | 66.26 |
| KRH22534 | Soybean | extracellular | 65.65 | 66.26 |
| CDY46845 | Canola | extracellular | 65.65 | 66.26 |
| KRH26821 | Soybean | endoplasmic reticulum | 65.35 | 65.95 |
| CDY59800 | Canola | extracellular | 65.35 | 65.95 |
| Bra015404.1-P | Field mustard | extracellular | 65.35 | 65.95 |
| KRH22535 | Soybean | extracellular | 64.74 | 65.74 |
| GSMUA_Achr2P03020_001 | Banana | extracellular | 60.18 | 65.13 |
| GSMUA_Achr9P30170_001 | Banana | extracellular | 58.36 | 64.86 |
| KRH56093 | Soybean | extracellular | 63.83 | 64.62 |
| AT1G05260.1 | Thale cress | extracellular | 63.83 | 64.42 |
| CDY49518 | Canola | extracellular | 63.83 | 64.42 |
| CDX86795 | Canola | extracellular | 63.53 | 64.11 |
| Bra035235.1-P | Field mustard | extracellular | 63.53 | 64.11 |
| CDY13252 | Canola | extracellular | 63.22 | 63.8 |
| Bra031309.1-P | Field mustard | extracellular | 63.22 | 63.8 |
| CDY38641 | Canola | extracellular | 63.22 | 63.8 |
| KRH56092 | Soybean | extracellular, mitochondrion | 62.01 | 62.96 |
| AT4G11290.1 | Thale cress | extracellular | 62.31 | 62.88 |
| KRH25412 | Soybean | extracellular | 61.09 | 62.04 |
| CDY19299 | Canola | vacuole | 62.01 | 62.01 |
| CDY55649 | Canola | vacuole | 62.01 | 62.01 |
| AT3G21770.1 | Thale cress | extracellular | 61.7 | 61.7 |
| Bra023862.1-P | Field mustard | vacuole | 61.7 | 61.7 |
| EER88826 | Sorghum | extracellular | 60.18 | 59.82 |
| TraesCS7B01G353200.1 | Wheat | extracellular | 57.45 | 57.1 |
| TraesCS7D01G442300.1 | Wheat | extracellular | 57.45 | 56.93 |
| TraesCS7A01G453000.1 | Wheat | extracellular | 57.14 | 56.8 |
| CDY33143 | Canola | extracellular | 62.61 | 56.44 |
| TraesCS7A01G452900.1 | Wheat | extracellular | 56.84 | 56.33 |
| HORVU7Hr1G102480.7 | Barley | extracellular | 57.75 | 56.21 |
| Os06t0681600-01 | Rice | extracellular | 57.14 | 55.79 |
| TraesCS7D01G442200.1 | Wheat | extracellular | 56.23 | 55.72 |
| Solyc05g046000.2.1 | Tomato | extracellular | 53.5 | 54.66 |
| Zm00001d014467_P002 | Maize | vacuole | 59.27 | 54.02 |
| Solyc12g005370.1.1 | Tomato | extracellular | 52.58 | 52.74 |
| Solyc08g075830.2.1 | Tomato | extracellular | 51.37 | 52.48 |
| TraesCS6A01G136500.1 | Wheat | extracellular | 51.98 | 52.29 |
| Solyc12g005790.1.1 | Tomato | extracellular | 51.37 | 52.16 |
| Solyc01g067850.2.1 | Tomato | extracellular | 51.06 | 51.85 |
| KRH25410 | Soybean | cytosol | 38.6 | 51.63 |
| CDY10042 | Canola | extracellular | 25.23 | 51.23 |
| TraesCS7B01G353100.1 | Wheat | extracellular | 56.23 | 50.41 |
| TraesCS6B01G164400.2 | Wheat | extracellular | 52.28 | 50.15 |
| TraesCS6D01G125500.1 | Wheat | extracellular | 52.28 | 50.0 |
| HORVU6Hr1G026230.5 | Barley | extracellular | 51.06 | 48.84 |
| Os02t0161800-01 | Rice | extracellular, mitochondrion | 51.06 | 48.28 |
| EES06321 | Sorghum | extracellular, golgi, plastid | 51.06 | 47.73 |
| Solyc01g067860.2.1 | Tomato | extracellular | 46.5 | 46.65 |
| Solyc01g067880.1.1 | Tomato | mitochondrion | 36.17 | 45.95 |
| Solyc06g054500.1.1 | Tomato | extracellular | 45.29 | 45.85 |
| Solyc02g064970.2.1 | Tomato | extracellular | 44.07 | 44.48 |
| Solyc01g105070.2.1 | Tomato | extracellular | 44.07 | 43.67 |
| Solyc01g104860.2.1 | Tomato | extracellular | 41.03 | 42.19 |
| Zm00001d053839_P001 | Maize | extracellular | 27.66 | 40.99 |
| Solyc10g047110.1.1 | Tomato | extracellular | 35.26 | 40.56 |
| Solyc01g067870.2.1 | Tomato | extracellular | 46.2 | 40.32 |
| Solyc04g064690.2.1 | Tomato | extracellular, vacuole | 38.91 | 33.07 |
Protein Annotations
| KEGG:00940+1.11.1.7 | Gene3D:1.10.420.10 | Gene3D:1.10.520.10 | MapMan:35.1 | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004601 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005618 |
| GO:GO:0005623 | GO:GO:0006950 | GO:GO:0006979 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 |
| GO:GO:0009505 | GO:GO:0009506 | GO:GO:0009664 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016491 |
| GO:GO:0020037 | GO:GO:0030312 | GO:GO:0042744 | GO:GO:0046872 | GO:GO:0055114 | GO:GO:0098869 |
| InterPro:Haem_peroxidase | InterPro:Haem_peroxidase_pln/fun/bac | InterPro:IPR002016 | UniProt:K4CFF4 | PFAM:PF00141 | PRINTS:PR00458 |
| PRINTS:PR00461 | ScanProsite:PS00435 | ScanProsite:PS00436 | PFscan:PS50873 | PANTHER:PTHR31235 | PANTHER:PTHR31235:SF39 |
| InterPro:Peroxidase_pln | InterPro:Peroxidases_AS | InterPro:Peroxidases_heam-ligand_BS | SUPFAM:SSF48113 | InterPro:Secretory_peroxidase | SignalP:SignalP-noTM |
| EnsemblPlantsGene:Solyc07g052550.1 | EnsemblPlants:Solyc07g052550.1.1 | UniParc:UPI000276B82F | : | : | : |
Description
Peroxidase [Source:UniProtKB/TrEMBL;Acc:K4CFF4]
Coordinates
chr7:+:61042290..61043801
Molecular Weight (calculated)
35956.1 Da
IEP (calculated)
8.147
GRAVY (calculated)
-0.025
Length
329 amino acids
Sequence
(BLAST)
(BLAST)
001: MSTFSLGLFV ICIVGIFLDA SHAQLQLNFY AKSCPKAEKI IEDYVHKHIP NAPSLAAALL RLHFHDCFVR GCDGFILLNF TSSTKNQTEK VAISNQSLRG
101: FSFIDGVKKI VEAECPGVVS CADIVALITR DSVVVTVGPF WNVPTGRRDG KISNASEALE NIPPPTSNLS SLQASFANKG LDLKDLVLLS GAHTIGIAHC
201: SSFSTRLYNF TGALGTQDPS LDSEYASNLK GEKCKSINDN TTIVEMDPGS FRTFDLSYYK LLFKRRGLFQ SDAALTTSST TKSYINQLVK GSLEEFNAEF
301: AKAMEKMGRI EVKTGSFGEI RKQCAFVNK
101: FSFIDGVKKI VEAECPGVVS CADIVALITR DSVVVTVGPF WNVPTGRRDG KISNASEALE NIPPPTSNLS SLQASFANKG LDLKDLVLLS GAHTIGIAHC
201: SSFSTRLYNF TGALGTQDPS LDSEYASNLK GEKCKSINDN TTIVEMDPGS FRTFDLSYYK LLFKRRGLFQ SDAALTTSST TKSYINQLVK GSLEEFNAEF
301: AKAMEKMGRI EVKTGSFGEI RKQCAFVNK
001: MNCLIAIALS VSFFLVGIVG PIQAQLQMNF YANSCPNAEK IVQDFVSNHV SNAPSLAAAL IRMHFHDCFV RGCDGSVLIN STSGNAERDA TPNLTVRGFG
101: FIDAIKSVLE AQCPGIVSCA DIIALASRDA VVFTGGPNWS VPTGRRDGRI SNAAEALANI PPPTSNITNL QTLFANQGLD LKDLVLLSGA HTIGVSHCSS
201: FTNRLYNFTG RGGQDPALDS EYAANLKSRK CPSLNDNKTI VEMDPGSRKT FDLSYYQLVL KRRGLFQSDS ALTTNPTTLS NINRILTGSV GSFFSEFAKS
301: MEKMGRINVK TGSAGVVRRQ CSVANS
101: FIDAIKSVLE AQCPGIVSCA DIIALASRDA VVFTGGPNWS VPTGRRDGRI SNAAEALANI PPPTSNITNL QTLFANQGLD LKDLVLLSGA HTIGVSHCSS
201: FTNRLYNFTG RGGQDPALDS EYAANLKSRK CPSLNDNKTI VEMDPGSRKT FDLSYYQLVL KRRGLFQSDS ALTTNPTTLS NINRILTGSV GSFFSEFAKS
301: MEKMGRINVK TGSAGVVRRQ CSVANS
Arabidopsis Description
PER3Peroxidase [Source:UniProtKB/TrEMBL;Acc:Q0WSR2]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.