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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 5
  • golgi 5
  • plastid 2
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:plastid, secretory
BaCelLo:secretory
ChloroP:plastid
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX84495 Canola extracellular 93.78 58.86
CDY43790 Canola extracellular 93.78 58.86
CDY15537 Canola extracellular 45.45 44.81
CDX84491 Canola extracellular 62.2 38.92
CDX84494 Canola extracellular 62.2 38.92
CDY70734 Canola extracellular 43.54 38.89
CDY43789 Canola extracellular 61.72 38.62
CDY39826 Canola extracellular, golgi 60.77 38.14
CDY31335 Canola extracellular 60.77 38.14
CDY10042 Canola extracellular 26.32 33.95
CDY43791 Canola extracellular 53.11 33.84
CDY66486 Canola extracellular 53.11 33.84
CDY31334 Canola extracellular 52.63 33.64
CDY50836 Canola extracellular 52.15 33.23
CDY37007 Canola extracellular 50.24 33.02
CDY39825 Canola extracellular 51.2 32.62
CDY35411 Canola extracellular 48.33 30.89
CDY06919 Canola extracellular 47.85 30.67
CDY14775 Canola extracellular 47.37 30.37
CDY69305 Canola extracellular 44.98 29.28
CDY49517 Canola extracellular 44.5 29.06
CDY22526 Canola extracellular 42.11 28.95
CDY46844 Canola extracellular, golgi 44.02 28.75
CDY65912 Canola extracellular 44.02 28.66
CDY10039 Canola extracellular 44.02 28.48
CDY49516 Canola extracellular 43.54 28.35
CDY46843 Canola extracellular 43.54 28.35
CDY37537 Canola extracellular 43.06 28.21
CDY55811 Canola extracellular, golgi, vacuole 43.06 28.21
CDY10038 Canola extracellular 44.5 28.01
CDY43275 Canola extracellular 42.58 27.9
CDY55446 Canola extracellular 44.98 27.65
CDY55444 Canola extracellular 43.54 27.41
CDY10040 Canola extracellular 41.63 27.1
CDY65910 Canola extracellular 43.54 27.08
CDY59801 Canola extracellular 43.54 27.08
CDY15538 Canola extracellular 42.58 26.81
CDX75919 Canola extracellular 40.67 26.23
CDY65911 Canola extracellular 39.23 26.11
CDY10037 Canola extracellular 40.67 26.07
CDY19299 Canola vacuole 40.67 25.84
CDY55649 Canola vacuole 40.67 25.84
CDY13252 Canola extracellular 40.19 25.77
CDX86795 Canola extracellular 40.19 25.77
CDX94393 Canola extracellular 40.19 25.77
CDY59800 Canola extracellular 40.19 25.77
CDX79195 Canola extracellular 39.23 25.71
CDY46845 Canola extracellular 39.71 25.46
CDY49518 Canola extracellular 39.23 25.15
CDY38641 Canola extracellular 38.76 24.85
CDX89378 Canola extracellular 38.76 24.85
CDY38365 Canola extracellular 39.23 24.4
CDX88340 Canola mitochondrion 39.23 24.33
CDX91005 Canola extracellular 38.28 24.24
CDX85561 Canola extracellular 37.8 23.94
CDX85056 Canola extracellular 37.32 23.71
CDX87544 Canola cytosol, golgi, plasma membrane 39.23 22.65
CDY07679 Canola endoplasmic reticulum, extracellular, golgi 38.28 22.28
CDY14412 Canola extracellular, golgi 38.28 22.28
CDY33143 Canola extracellular 37.8 21.64
CDX69544 Canola extracellular 37.32 18.89
Protein Annotations
KEGG:00940+1.11.1.7Gene3D:1.10.420.10Gene3D:1.10.520.10MapMan:35.1GO:A0A078D5Q9EnsemblPlants:CDX84492
ProteinID:CDX84492ProteinID:CDX84492.1GO:GO:0003674GO:GO:0003824GO:GO:0004601GO:GO:0005488
GO:GO:0006950GO:GO:0006979GO:GO:0008150GO:GO:0008152GO:GO:0020037GO:GO:0055114
EnsemblPlantsGene:GSBRNA2T00141715001InterPro:Haem_peroxidaseInterPro:Haem_peroxidase_pln/fun/bacInterPro:IPR002016PFAM:PF00141PRINTS:PR00458
PRINTS:PR00461ScanProsite:PS00436PFscan:PS50873PANTHER:PTHR31235PANTHER:PTHR31235:SF27MetaCyc:PWY-5461
MetaCyc:PWY-7214MetaCyc:PWY-7445InterPro:Peroxidase_plnInterPro:Peroxidases_ASSUPFAM:SSF48113SignalP:SignalP-noTM
TMHMM:TMhelixUniParc:UPI0004EEFDFASEG:seg:::
Description
BnaC03g50080D
Coordinates
chrLK031837:-:1444470..1448346
Molecular Weight (calculated)
22974.5 Da
IEP (calculated)
6.735
GRAVY (calculated)
0.132
Length
209 amino acids
Sequence
(BLAST)
001: MASVTNFNPH SVFLPLFLVL AATATATTRP YPFLPRPRVG YYGSACWNVE SIVRSVVQSN YFTNPANAPG ILRMHFHDCF VRGCDGSILL DGPNSEKTAI
101: PNQSLRGFNV IEEAKTQLEI ACPLTVSCAD ILALAARDFV VLTGGPWWPV PLGRLDGRVS LASNVDLPEP TDSVAVQKQR FAAKYLNTQD LVVLAVDRCN
201: SYYQDFFCL
Best Arabidopsis Sequence Match ( AT5G39580.1 )
(BLAST)
001: MGLVRSFALV IVFLSCLIAV YGQGTRIGFY STTCPNAETI VRTTVASHFG SDPKVAPGLL RMHNHDCFVQ GCDGSVLLSG PNSERTAGAN VNLHGFEVID
101: DAKRQLEAAC PGVVSCADIL ALAARDSVSL TNGQSWQVPT GRRDGRVSLA SNVNNLPSPS DSLAIQQRKF SAFRLNTRDL VTLVGGGHTI GTAACGFITN
201: RIFNSSGNTA DPTMDQTFVP QLQRLCPQNG DGSARVDLDT GSGNTFDTSY FINLSRNRGI LQSDHVLWTS PATRSIVQEF MAPRGNFNVQ FARSMVKMSN
301: IGVKTGTNGE IRRVCSAVN
Arabidopsis Description
PER62Peroxidase 62 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKA4]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.