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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 1
  • mitochondrion 6
  • plasma membrane 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6B01G182600.1 Wheat mitochondrion, plasma membrane 71.56 71.43
HORVU6Hr1G031360.1 Barley mitochondrion, plastid 70.62 70.49
TraesCS6D01G144500.1 Wheat plasma membrane 70.24 70.11
EES04614 Sorghum mitochondrion 67.23 67.11
Os04t0607500-01 Rice plasma membrane 45.2 43.48
Os04t0607600-01 Rice plasma membrane 40.11 42.6
Os01t0307500-01 Rice nucleus, peroxisome, plasma membrane 39.36 37.73
Os01t0532600-00 Rice plastid 33.52 34.97
Os06t0701600-01 Rice plasma membrane 33.33 34.77
Os06t0701700-01 Rice plasma membrane 34.65 34.72
Os04t0607583-00 Rice plasma membrane 19.02 34.71
Protein Annotations
MapMan:24.2.20EntrezGene:4328468EMBL:AJ491818ProteinID:BAD26198.1ProteinID:BAD27606.1ProteinID:BAF07966.1
ProteinID:BAS77240.1ProteinID:CAD37184.1InterPro:Cat_transptGO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0005623GO:GO:0005886GO:GO:0006810GO:GO:0006811GO:GO:0006812GO:GO:0008150
GO:GO:0008324GO:GO:0015081GO:GO:0016020GO:GO:0016021GO:GO:0035725GO:GO:0055085
GO:GO:0098655EnsemblPlantsGene:Os02g0175000EnsemblPlants:Os02t0175000-01PFAM:PF02386PANTHER:PTHR31064PANTHER:PTHR31064:SF20
UniProt:Q6H501TMHMM:TMhelixUniParc:UPI00000A6476RefSeq:XP_015626193.1SEG:seg:
Description
HIGH-AFFINITY K+ TRANSPORTER 6Ion transporter , Na+ transport (Os02t0175000-01)
Coordinates
chr2:+:4103387..4105657
Molecular Weight (calculated)
59308.0 Da
IEP (calculated)
9.788
GRAVY (calculated)
0.280
Length
531 amino acids
Sequence
(BLAST)
001: MNHCLVVSHK KLQTFRTFAA SKFSSFTKSA QKSIKYSFQF IYQNNPLFVH VAYFALISFA GYGSLKVLKP RDKSNTLKDL DVLFTSVSAS TVSSMATVEM
101: EDFSSAQLWV LTILMLIGGE VFTSMLGIHF MRAEFGTKES VSTRDHSPCI DIESITSTKF GPSTQGTKVT VSFSELRMEN GGHVEPKTIK FLGFVVMGYL
201: LITNLGGSLL IYLYLNLVPS AHKILKRKGI GIIVFSVFTA ISSVGNCGFT PVNENMIIFQ KNSILLLLIL PQILAGNTLF APCLRLMVWS LEKITGKKDC
301: RYILEYPKAI GYKHLMSTRE SVYLTLTVVS LIILQTVLFL SLEWSSVALD GMSNYQKIVS ALFQSVNARH AGESVTDLSN LSSAILVLYT IMMYLPGYTS
401: FLPRHDGEDS KTEKINKRKG LLENWIFSHM SYLAIFVMLI CITERDSMAT DPLNFNVFSI LFEVVSAYGN VGFSVGYSCK RLLNHDARCK DASYGFAGKW
501: SDNGKAILII VMLFGRLKTF NMKGGRAWKL R
Best Arabidopsis Sequence Match ( AT4G10310.1 )
(BLAST)
001: MDRVVAKIAK IRSQLTKLRS LFFLYFIYFL FFSFLGFLAL KITKPRTTSR PHDFDLFFTS VSAITVSSMS TVDMEVFSNT QLIFLTILMF LGGEIFTSFL
101: NLYVSYFTKF VFPHNKIRHI LGSYNSDSSI EDRCDVETVT DYREGLIKID ERASKCLYSV VLSYHLVTNL VGSVLLLVYV NFVKTARDVL SSKEISPLTF
201: SVFTTVSTFA NCGFVPTNEN MIIFRKNSGL IWLLIPQVLM GNTLFPCFLV LLIWGLYKIT KRDEYGYILK NHNKMGYSHL LSVRLCVLLG VTVLGFLIIQ
301: LLFFCAFEWT SESLEGMSSY EKLVGSLFQV VNSRHTGETI VDLSTLSPAI LVLFILMMYL PPYTLFMPLT EQKTIEKEGG DDDSENGKKV KKSGLIVSQL
401: SFLTICIFLI SITERQNLQR DPINFNVLNI TLEVISAYGN VGFTTGYSCE RRVDISDGGC KDASYGFAGR WSPMGKFVLI IVMFYGRFKQ FTAKSGRAWI
501: LYPSSS
Arabidopsis Description
HKT1Sodium transporter HKT1 [Source:UniProtKB/Swiss-Prot;Acc:Q84TI7]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.