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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • peroxisome 2
  • plasma membrane 3
  • vacuole 2
  • extracellular 1
  • endoplasmic reticulum 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, peroxisome, secretory
BaCelLo:nucleus
MultiLoc:peroxisome
Plant-mPloc:plasma membrane, vacuole
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
 plasma membrane: 27800704
plasma membrane: 28056797
msms PMID: 27800704 doi
J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
msms PMID: 28056797 doi
N Yang, T Wang
Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os02t0519100-01 Rice nucleus, peroxisome, plasma membrane 89.89 89.29
TraesCS3D01G473400.1 Wheat peroxisome 83.56 83.33
TraesCS3B01G521800.1 Wheat peroxisome 82.88 82.55
EES05152 Sorghum peroxisome 81.54 82.31
TraesCS3A01G478300.1 Wheat peroxisome 82.75 82.2
TraesCS6D01G061800.1 Wheat peroxisome 79.78 80.65
TraesCS6B01G084200.1 Wheat peroxisome 80.05 80.6
TraesCS6B01G084000.1 Wheat peroxisome 79.38 80.03
HORVU3Hr1G104870.4 Barley peroxisome, plasma membrane 82.08 79.92
HORVU1Hr1G066970.3 Barley cytosol, peroxisome 79.92 79.92
TraesCS6A01G063000.1 Wheat peroxisome 79.11 79.86
TraesCS6D01G062200.1 Wheat peroxisome 79.38 79.81
TraesCS6A01G062700.1 Wheat peroxisome 79.11 79.32
Os04t0401700-03 Rice plastid 76.28 71.46
KRH69024 Soybean cytosol, peroxisome, plasma membrane 43.94 55.73
Os01t0930400-01 Rice plasma membrane 57.41 54.55
Bra003195.1-P Field mustard plasma membrane 51.62 53.72
VIT_01s0011g03020.t01 Wine grape cytosol, nucleus, plasma membrane 57.95 52.76
CDX67610 Canola cytosol, peroxisome, plasma membrane 52.97 52.61
KRG97298 Soybean mitochondrion 56.2 52.39
Os07t0102100-02 Rice plasma membrane 55.26 51.9
AT4G13420.1 Thale cress cytosol, peroxisome, plasma membrane 54.85 51.85
PGSC0003DMT400035722 Potato cytosol, peroxisome, plasma membrane 54.04 51.15
CDY07520 Canola cytosol, peroxisome, plasma membrane 53.91 51.02
Solyc12g005670.1.1 Tomato cytosol, peroxisome, plasma membrane 54.04 51.02
Os03t0576200-00 Rice cytosol, peroxisome, plasma membrane 54.45 50.56
KRH47652 Soybean cytosol, peroxisome, plasma membrane 54.58 50.37
GSMUA_Achr10P... Banana cytosol, peroxisome, plasma membrane 45.82 50.15
Os03t0574900-01 Rice cytosol 53.77 49.2
Os03t0575200-01 Rice plasma membrane 52.56 48.09
Os08t0206400-01 Rice cytosol, golgi, nucleus 8.22 46.21
Os04t0613900-01 Rice plasma membrane 41.91 39.32
Os09t0563200-01 Rice plasma membrane 41.64 38.97
Os07t0679000-01 Rice plasma membrane 40.57 38.2
Os01t0935500-01 Rice plasma membrane 40.3 38.19
Os09t0376900-01 Rice plasma membrane 44.74 37.86
Os06t0671000-01 Rice plasma membrane 38.54 36.76
Os02t0730300-01 Rice plasma membrane 37.87 36.49
Os01t0369300-02 Rice plasma membrane 30.19 34.62
Os06t0270200-00 Rice plasma membrane 34.64 33.38
Os06t0625900-01 Rice vacuole 37.87 33.33
Os03t0337500-00 Rice plasma membrane 38.54 32.99
Os04t0610700-01 Rice plasma membrane 36.93 31.6
Os07t0509200-01 Rice plasma membrane 18.19 31.11
Os07t0669650-01 Rice plasma membrane 8.89 24.44
Protein Annotations
MapMan:24.2.3.11EntrezGene:4329486EMBL:AK106353ProteinID:BAD26327.1ProteinID:BAF08880.1ProteinID:BAS78927.1
ncoils:CoilGO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0006811
GO:GO:0006813GO:GO:0008150GO:GO:0009987GO:GO:0015079GO:GO:0016020GO:GO:0016021
GO:GO:0071805InterPro:K+_transporterEnsemblPlantsGene:Os02g0518600EnsemblPlants:Os02t0518600-01PFAM:PF02705PANTHER:PTHR30540
PANTHER:PTHR30540:SF30UniProt:Q6H4M2TIGRFAMs:TIGR00794TMHMM:TMhelixUniParc:UPI00003B4697RefSeq:XP_015623439.1
RefSeq:XP_015623440.1RefSeq:XP_015623441.1SEG:seg:::
Description
HIGH-AFFINITY POTASSIUM(K+) TRANSPORTER 19Similar to Potassium transporter 1 (OsHAK1). Splice isoform 2. (Os02t0518600-01)
Coordinates
chr2:-:18845552..18851842
Molecular Weight (calculated)
81964.1 Da
IEP (calculated)
8.836
GRAVY (calculated)
0.336
Length
742 amino acids
Sequence
(BLAST)
001: MSVQEDGAAR PEPDVLRRHD SLYGDAEKVS NNKRHGAGGS WARTLQLAFQ SIGVVYGDVG TSPLYVYSST FPNGIKHPDD LVGVLSLILY TLILIPMVKY
101: VFIVLYANDN GDGGTFALYS LISRHAKIRM IPNDQTEDAN VSNYSIEAPS SQLRRAEWVK QKLESSNAAK IALFTITILG TSMVMGDGTL TPAISVLSAV
201: SGIREKAPNL TQSQVVWISV AILFVLFSMQ RFGTDKVGYT FAPVISVWFL LIAGIGMYNL TVHEITILRA FNPKYIVDYF RRNGKEAWVS LGGVVLCITG
301: TEAMFADLGH FNIRAIQLSF TCVLFPSVAL CYMGQAAYLR KFPENVGDTF YRSIPAPLFW PVFVVAIMGA IIASQAMLSG AFAILSKALS LGCFPRVEVV
401: HTSNKYEGQV YIPEVNFLIG AASVAVTLAF QTTANIGNAY GICVVTVFSI TTHLMTVVML LIWKVRLPFI AAFYAAFGLA EFLYLSSILS KFAEGGYLPF
501: CFSLVLMALM ATWHYVHVKR YWYELDRVVP AAETTALLAR RDVRRVPGVG LLYSELVQGI PPVFPRLVDK IPSVHAVFVF MSIKHLPVPR VAPAERFIFR
601: RVVGADAGAG HRLFRCVARY GYTDQLEGAK EFAAFLLDRL KVFVHEESVF ACSRGDNDDD DAMRRAQAMA EEEKRVIDAE AERGVVYLMG EANVTAAAGS
701: SVMKRIVVNY VYTLLRKNLR EGHKALSVPK DQLLKVGITY EI
Best Arabidopsis Sequence Match ( AT4G13420.1 )
(BLAST)
001: MDGEEHQIDG DEVNNHENKL NEKKKSWGKL YRPDSFIIEA GQTPTNTGRR SLMSWRTTMS LAFQSLGVVY GDIGTSPLYV YASTFTDGIN DKDDVVGVLS
101: LIIYTITLVA LLKYVFIVLQ ANDNGEGGTF ALYSLICRYA KMGLIPNQEP EDVELSNYTL ELPTTQLRRA HMIKEKLENS KFAKIILFLV TIMGTSMVIG
201: DGILTPSISV LSAVSGIKSL GQNTVVGVSV AILIVLFAFQ RFGTDKVGFS FAPIILVWFT FLIGIGLFNL FKHDITVLKA LNPLYIIYYF RRTGRQGWIS
301: LGGVFLCITG TEAMFADLGH FSVRAVQISF SCVAYPALVT IYCGQAAYLT KHTYNVSNTF YDSIPDPLYW PTFVVAVAAS IIASQAMISG AFSVISQSLR
401: MGCFPRVKVV HTSAKYEGQV YIPEINYLLM LACIAVTLAF RTTEKIGHAY GIAVVTVMVI TTLMVTLIML VIWKTNIVWI AIFLVVFGSI EMLYLSSVMY
501: KFTSGGYLPL TITVVLMAMM AIWQYVHVLK YRYELREKIS RENAIQMATS PDVNRVPGIG LFYTELVNGI TPLFSHYISN LSSVHSVFVL ISIKTLPVNR
601: VTSSERFFFR YVGPKDSGMF RCVVRYGYKE DIEEPDEFER HFVYYLKEFI HHEHFMSGGG GEVDETDKEE EPNAETTVVP SSNYVPSSGR IGSAHSSSSD
701: KIRSGRVVQV QSVEDQTELV EKAREKGMVY LMGETEITAE KESSLFKKFI VNHAYNFLKK NCREGDKALA IPRSKLLKVG MTYEL
Arabidopsis Description
POT5Potassium transporter [Source:UniProtKB/TrEMBL;Acc:Q53XI1]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.