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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • plasma membrane 4
  • vacuole 2
  • extracellular 1
  • endoplasmic reticulum 1
  • golgi 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:mitochondrion, plastid, secretory
BaCelLo:plastid
MultiLoc:plasma membrane
Plant-mPloc:vacuole
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:plasma membrane
YLoc:plasma membrane
 plasma membrane: 18557835
plasma membrane: 27800704
msms PMID: 27800704 doi
J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
msms PMID: 18557835 doi
SA Whiteman, TS Nühse, DA Ashford, D Sanders, FJ Maathuis
Department of Biology Area 9, University of York, York YO10 5DD, UK.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6B01G322300.3 Wheat plasma membrane 87.4 87.63
KXG30825 Sorghum plasma membrane 87.79 87.34
Zm00001d017925_P004 Maize plasma membrane 87.4 87.06
TraesCS6D01G273100.1 Wheat plasma membrane 86.75 86.98
TraesCS6A01G291900.2 Wheat plasma membrane 86.62 86.74
Zm00001d051756_P004 Maize plasma membrane 86.49 86.72
HORVU6Hr1G073030.13 Barley plasma membrane, vacuole 86.88 84.9
Os06t0270200-00 Rice plasma membrane 76.49 76.49
GSMUA_Achr9P22670_001 Banana cytosol, peroxisome, plasma membrane 69.09 74.3
CDY57844 Canola plasma membrane 66.1 72.71
VIT_01s0026g00270.t01 Wine grape plasma membrane 72.86 72.11
VIT_14s0066g01580.t01 Wine grape plasma membrane 72.73 71.52
CDY03755 Canola plasma membrane 61.43 71.13
KRG93348 Soybean plasma membrane 70.52 69.62
KRH20327 Soybean plasma membrane 70.13 69.32
Solyc05g005740.2.1 Tomato cytosol, plasma membrane, vacuole 69.87 69.06
PGSC0003DMT400010525 Potato plasma membrane 69.74 68.93
PGSC0003DMT400001329 Potato cytosol, golgi, plasma membrane 68.83 68.65
Solyc02g087000.2.1 Tomato plasma membrane 69.09 68.65
PGSC0003DMT400035889 Potato plasma membrane 43.64 68.02
CDY43004 Canola plasma membrane 68.57 67.95
AT5G14880.1 Thale cress plasma membrane 68.05 67.09
AT1G70300.1 Thale cress plasma membrane 67.92 66.88
Solyc04g025880.2.1 Tomato plasma membrane 67.14 66.71
KRH45700 Soybean plasma membrane 67.92 66.71
Bra016225.1-P Field mustard cytosol, plasma membrane, vacuole 67.79 66.67
CDY11599 Canola plasma membrane 67.66 66.37
Os06t0625900-01 Rice vacuole 72.21 65.95
GSMUA_Achr1P09670_001 Banana plasma membrane 58.05 65.83
KRG99315 Soybean plasma membrane 65.97 65.13
KRH74619 Soybean plasma membrane 65.19 63.71
KRH69531 Soybean plasma membrane 60.52 62.47
Bra007910.1-P Field mustard cytosol, plasma membrane, vacuole 44.81 61.94
CDY03756 Canola cytosol 5.32 60.29
Os07t0679000-01 Rice plasma membrane 61.43 60.03
Os01t0935500-01 Rice plasma membrane 51.43 50.57
Os01t0369300-02 Rice plasma membrane 42.34 50.39
Os03t0337500-00 Rice plasma membrane 56.36 50.06
Os07t0669650-01 Rice plasma membrane 17.14 48.89
Os06t0671000-01 Rice plasma membrane 49.09 48.59
Os09t0563200-01 Rice plasma membrane 44.42 43.13
Bra023490.1-P Field mustard cytosol, plasma membrane, vacuole 68.57 42.58
Os04t0613900-01 Rice plasma membrane 43.12 41.97
Os08t0206400-01 Rice cytosol, golgi, nucleus 7.14 41.67
Os02t0518600-01 Rice plasma membrane 36.49 37.87
Os01t0930400-01 Rice plasma membrane 37.27 36.75
Os02t0519100-01 Rice nucleus, peroxisome, plasma membrane 35.45 36.55
Os09t0376900-01 Rice plasma membrane 41.56 36.49
Os07t0102100-02 Rice plasma membrane 37.14 36.2
CDX85579 Canola plasma membrane 67.14 36.1
Os07t0509200-01 Rice plasma membrane 20.13 35.71
Os04t0401700-03 Rice plastid 36.1 35.1
CDX91017 Canola plasma membrane 68.7 34.67
Os03t0576200-00 Rice cytosol, peroxisome, plasma membrane 35.84 34.54
Os03t0574900-01 Rice cytosol 35.71 33.91
Os03t0575200-01 Rice plasma membrane 34.16 32.43
Os04t0610700-01 Rice plasma membrane 33.9 30.1
Bra023491.1-P Field mustard cytosol, extracellular, mitochondrion, plastid 0.0 0.0
Protein Annotations
MapMan:24.2.3.11EntrezGene:4330614EMBL:AK111629ProteinID:BAD15925.1ProteinID:BAD16364.1ProteinID:BAF09926.1
ProteinID:BAS80740.1ProteinID:BAS80741.1GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0005623
GO:GO:0005886GO:GO:0006810GO:GO:0006811GO:GO:0006813GO:GO:0008150GO:GO:0009987
GO:GO:0015079GO:GO:0016020GO:GO:0016021GO:GO:0071805InterPro:K+_transporterEnsemblPlantsGene:Os02g0730300
EnsemblPlants:Os02t0730300-01PFAM:PF02705PANTHER:PTHR30540PANTHER:PTHR30540:SF17UniProt:Q6YWQ4TIGRFAMs:TIGR00794
TMHMM:TMhelixUniParc:UPI0000358BF5RefSeq:XP_015625454.1RefSeq:XP_015625455.1SEG:seg:
Description
HIGH-AFFINITY POTASSIUM(K+) TRANSPORTER 25Similar to Potassium transporter HAK3p (Fragment). (Os02t0730300-01);Similar to Potassium transporter 25. (Os02t0730300-02)
Coordinates
chr2:+:30418498..30423139
Molecular Weight (calculated)
85543.9 Da
IEP (calculated)
8.574
GRAVY (calculated)
0.358
Length
770 amino acids
Sequence
(BLAST)
001: MDLEAAHGAA AAPGKRRRRA RESWGASLLL AYQSLGVVYG DVATSPLYVY KSAFAGDDIQ HSAGNEEIYG VLSFVFWTLT LISLVKYVLI VLRADDGGEG
101: GTFALYSLIC RHVRAGLLPG GAGDELAVGG RRDARAMSRL RAMLERYRVL QRLLLLFALL GTCMVIGDGV LTPAVSVYSA VSGLELSMEH EHHKYVQLPV
201: TCAILIGLFA LQHYGTHRVG FIFAPIVCVW LLCISAIGVY NIVHWNHHVY RALSPYYMYQ FLKKTQTGGW MSLGGILLCV TGSEAMYADL GHFSQSSIKI
301: AFMSVVYPAL VLAYMGQAAY ISQHHSFENA YHIGFYVSVP EKLRWPVLVI AILAAVVGSQ AVITGTFSII KQCSSLSCFP GVKIVHTSST VHGQIYIPEI
401: NWILMILCLA VTLGFRNTKH LANAQGLAVI TVMLVTTCLM SLVIVLCWNK SIFLALGFLI FFGTIEVLYF SASLVKFHEG AWVPITLSFI FMIVMCVWHY
501: GTIKKYEFDF QNKVSVNWLL NLGPSLGIVR VRGIGLIHTE LVSGIPAIFS HFVTNLPAFH QVLVFLCVKS VPVPHVQPEE RFLVGRIGPK EYRLYRVIVR
601: YGYRDVQKDD IEFEKDLVSS IAEFIRSGDS HHNGVLEDTD KSCEKLSSIS NGIPLWMEDG EVDASASPHK ETDTQIISPN RKKARFVLPK NAQVDSEVRR
701: ELQELMDARE AGMSFILGHS YMKAKSGSSF IKRIVINFFY EFLRRNSRGP SYAATIPHAS TLEVGMVYQV
Best Arabidopsis Sequence Match ( AT1G70300.1 )
(BLAST)
001: MEIESGSYQN AKKESWRTVL TLAYQSLGVV YGDLSISPLY VYKSTFAEDI HHSESNEEIF GVLSFIFWTI TLVPLLKYVF IVLRADDNGE GGTFALYSLL
101: CRHARVNSLP SCQLADEQLI EYKTDSIGSS SMPQSGFAAS LKSTLEKHGV LQKILLVLAL IGTCMVIGDG VLTPAISVFS AVSGVELSMS KEHHKYIELP
201: AACVILIGLF ALQHYGTHRV GFLFAPVILL WLMCISAIGV YNIFHWNPHV YQALSPYYMY KFLKKTQSRG WMSLGGILLC ITGSEAMFAD LGHFSQLSIK
301: IAFTSLVYPS LILAYMGQAA YLSQHHIIES EYNIGFYVSV PERLRWPVLV IAILAAVVGS QAIITGTFSI IKQCSALGCF PKVKIVHTSS KIHGQIYIPE
401: INWILMVLCL AVTIGFRDTK RLGNASGLAV ITVMLVTTCL MSLVIVLCWH KSVIFAIVFV VFFGTIESLY FSASLIKFLE GAWVPIALAF CFLLAMCTWH
501: YGTLKRYEYD VQNKVSVNWL LSLSQTLGIA RVRGLGLIHT ELVSGVPAIF SHFVTNLPAF HQVLVFLCVK SVPVPHVRPQ ERFLVGRIGP KEFRIYRCIV
601: RFGYRDVHKD DFEFEGDLVC SIAEFIRTEA ETAATAAETN GEDDDRMSVV GTCSTYMQGI EDHYESDIDD PDKPGTSEIR SPKPKKKSKS KVKKRVRFVV
701: PETPKIEKET RQELMELTEA REGGVAYIMG NAYMKAKPGS GLLKRLAINI GYEFLRRNTR GPRNMLTSPH ASTLEVGMIY NV
Arabidopsis Description
POT6Potassium transporter 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8W4I4]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.