Factsheet for Bra023491.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, extracellular, cytosol

Predictor Summary:

plastid 3
endoplasmic reticulum 1
mitochondrion 3
extracellular 2
nucleus 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX85579	Canola	plasma membrane	100.0	11.1
CDX91017	Canola	plasma membrane	96.86	10.09
TraesCS6B01G322300.3	Wheat	plasma membrane	0.0	0.0
HORVU7Hr1G053250.1	Barley	cytosol	0.0	0.0
HORVU7Hr1G092940.2	Barley	plastid	0.0	0.0
KRG93348	Soybean	plasma membrane	0.0	0.0
KRH20327	Soybean	plasma membrane	0.0	0.0
KXG30825	Sorghum	plasma membrane	0.0	0.0
Os02t0730300-01	Rice	plasma membrane	0.0	0.0
Os06t0270200-00	Rice	plasma membrane	0.0	0.0
Os06t0625900-01	Rice	vacuole	0.0	0.0
PGSC0003DMT400001329	Potato	cytosol, golgi, plasma membrane	0.0	0.0
Solyc02g087000.2.1	Tomato	plasma membrane	0.0	0.0
TraesCS6A01G291900.2	Wheat	plasma membrane	0.0	0.0
HORVU6Hr1G073030.13	Barley	plasma membrane, vacuole	0.0	0.0
TraesCS6D01G273100.1	Wheat	plasma membrane	0.0	0.0
TraesCS7A01G209900.1	Wheat	plasma membrane	0.0	0.0
TraesCS7A01G393600.1	Wheat	plasma membrane	0.0	0.0
TraesCS7B01G116700.2	Wheat	plasma membrane	0.0	0.0
TraesCS7B01G295600.2	Wheat	plasma membrane	0.0	0.0
TraesCS7D01G211800.1	Wheat	plasma membrane	0.0	0.0
TraesCS7D01G388900.2	Wheat	plasma membrane	0.0	0.0
VIT_14s0066g01580.t01	Wine grape	plasma membrane	0.0	0.0
Zm00001d017925_P004	Maize	plasma membrane	0.0	0.0
Zm00001d036784_P002	Maize	plasma membrane	0.0	0.0
Zm00001d037305_P001	Maize	plasma membrane	0.0	0.0
Zm00001d046679_P002	Maize	plasma membrane	0.0	0.0
Zm00001d051756_P004	Maize	plasma membrane	0.0	0.0
Bra020940.1-P	Field mustard	plasma membrane	0.0	0.0
Bra003195.1-P	Field mustard	plasma membrane	0.0	0.0
Bra005370.1-P	Field mustard	plasma membrane	0.0	0.0
Bra006020.1-P	Field mustard	cytosol, nucleus, plasma membrane	0.0	0.0
Bra007910.1-P	Field mustard	cytosol, plasma membrane, vacuole	0.0	0.0
Bra011451.1-P	Field mustard	cytosol, nucleus, plasma membrane	0.0	0.0
Bra012526.1-P	Field mustard	cytosol, peroxisome, plasma membrane	0.0	0.0
Bra012528.1-P	Field mustard	cytosol, peroxisome, plasma membrane	0.0	0.0
Bra013433.1-P	Field mustard	cytosol, peroxisome, plasma membrane	0.0	0.0
Bra013718.1-P	Field mustard	plasma membrane	0.0	0.0
Bra016225.1-P	Field mustard	cytosol, plasma membrane, vacuole	0.0	0.0
Bra016986.1-P	Field mustard	cytosol, golgi, plasma membrane	0.0	0.0
Bra018342.1-P	Field mustard	plasma membrane	0.0	0.0
HORVU7Hr1G042800.11	Barley	mitochondrion, plasma membrane	0.0	0.0
Bra022776.1-P	Field mustard	plasma membrane	0.0	0.0
Bra023490.1-P	Field mustard	cytosol, plasma membrane, vacuole	0.0	0.0
Bra031523.1-P	Field mustard	cytosol, peroxisome, plasma membrane	0.0	0.0
Bra038410.1-P	Field mustard	cytosol, peroxisome, plasma membrane	0.0	0.0
Bra040706.1-P	Field mustard	plasma membrane	0.0	0.0
EER89587	Sorghum	plasma membrane	0.0	0.0
EER90068	Sorghum	peroxisome	0.0	0.0
GSMUA_Achr1P09670_001	Banana	plasma membrane	0.0	0.0
GSMUA_Achr3P06140_001	Banana	plasma membrane	0.0	0.0
GSMUA_Achr7P20040_001	Banana	plasma membrane	0.0	0.0
GSMUA_Achr9P22670_001	Banana	cytosol, peroxisome, plasma membrane	0.0	0.0
AT5G14880.1	Thale cress	plasma membrane	0.0	0.0

Protein Annotations

EnsemblPlants:Bra023491.1	EnsemblPlants:Bra023491.1-P	EnsemblPlantsGene:Bra023491	PANTHER:PTHR13833	PANTHER:PTHR13833:SF68	SEG:seg
UniParc:UPI00025435DC	UniProt:M4E3Y8	MapMan:35.2	:	:	:

Description

AT5G14890 (E=8e-076) | NHL repeat-containing protein

Coordinates

chrA02:+:3609079..3609558

Molecular Weight (calculated)

18184.2 Da

IEP (calculated)

7.460

GRAVY (calculated)

-0.705

Length

159 amino acids

Sequence
(BLAST)

001: MHEAMFAKRG CCLFLPCLGS SQPSSHGGSV WWQRIRTVDK LEPDERWWMS GWSKMREWSE ILAGPKWKTF IRRVGRSHCC GGVGDGGGGG NRTDHVDFRY
101: DSWSYSLNFD DGKQTGHFED EFPYRDYSMR FTSPSLPVST KSSIDFDNDS YAPPLPLVK

Best Arabidopsis Sequence Match ( AT5G14895.1 )
(BLAST)

001: MGLESFPISE MDATDEMHEA MFAKRGCCFI LPCLGSSQPS GPNGSVWWQR IRTVDKLEPD ERWWVSGWMK MREWSEIVAG PKWKTFIRRF GRNHCCNGGI
101: DGGCNRPEHV SFRYDSWSYS LNFDDGKQTG HFEDEFPYRD YSMRFAAPSL PVSTKCSIDF DNDNHAPSLF K

Arabidopsis Description

NHL domain protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8BDM5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.