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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plasma membrane 4
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, plasma membrane
BaCelLo:nucleus
MultiLoc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
KXG21735

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G70300.1 KXG21735 AT5G05410.1 18552202
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d017925_P004 Maize plasma membrane 95.87 95.99
Zm00001d051756_P004 Maize plasma membrane 94.32 95.05
Os02t0730300-01 Rice plasma membrane 87.34 87.79
TraesCS6B01G322300.3 Wheat plasma membrane 85.66 86.33
TraesCS6D01G273100.1 Wheat plasma membrane 85.14 85.81
TraesCS6A01G291900.2 Wheat plasma membrane 85.14 85.7
HORVU6Hr1G073030.13 Barley plasma membrane, vacuole 85.92 84.39
EER89587 Sorghum plasma membrane 74.94 75.03
GSMUA_Achr9P22670_001 Banana cytosol, peroxisome, plasma membrane 67.44 72.91
CDY57844 Canola plasma membrane 65.37 72.29
VIT_01s0026g00270.t01 Wine grape plasma membrane 72.09 71.72
CDY03755 Canola plasma membrane 61.5 71.58
VIT_14s0066g01580.t01 Wine grape plasma membrane 71.58 70.75
Solyc05g005740.2.1 Tomato cytosol, plasma membrane, vacuole 69.51 69.06
PGSC0003DMT400001329 Potato cytosol, golgi, plasma membrane 68.86 69.04
Solyc02g087000.2.1 Tomato plasma membrane 68.99 68.9
KRG93348 Soybean plasma membrane 69.38 68.85
PGSC0003DMT400010525 Potato plasma membrane 69.25 68.81
KRH20327 Soybean plasma membrane 68.6 68.16
CDY43004 Canola plasma membrane 68.22 67.95
AT5G14880.1 Thale cress plasma membrane 67.44 66.84
AT1G70300.1 Thale cress plasma membrane 67.44 66.75
PGSC0003DMT400035889 Potato plasma membrane 42.51 66.6
Solyc04g025880.2.1 Tomato plasma membrane 66.67 66.58
Bra016225.1-P Field mustard cytosol, plasma membrane, vacuole 67.31 66.54
EER90068 Sorghum peroxisome 70.41 66.46
KRH45700 Soybean plasma membrane 67.31 66.45
CDY11599 Canola plasma membrane 67.18 66.24
KRG99315 Soybean plasma membrane 65.89 65.38
GSMUA_Achr1P09670_001 Banana plasma membrane 56.98 64.95
KRH74619 Soybean plasma membrane 65.25 64.09
KRH69531 Soybean plasma membrane 60.34 62.6
Bra007910.1-P Field mustard cytosol, plasma membrane, vacuole 44.7 62.12
EER99908 Sorghum plasma membrane 61.76 60.35
EER94895 Sorghum plasma membrane 60.34 58.01
CDY03756 Canola cytosol 5.04 57.35
EER99886 Sorghum plasma membrane 53.36 52.41
EES02024 Sorghum plasma membrane 52.71 52.11
KXG32509 Sorghum plasma membrane 51.03 48.71
OQU76859 Sorghum plasma membrane 48.06 47.75
OQU80069 Sorghum plasma membrane 43.54 42.66
Bra023490.1-P Field mustard cytosol, plasma membrane, vacuole 67.96 42.42
EER98483 Sorghum plasma membrane 42.64 41.93
EES12852 Sorghum plasma membrane 42.38 40.75
EES02013 Sorghum cytosol, peroxisome, plasma membrane 37.73 37.68
EER98827 Sorghum cytosol, peroxisome, plasma membrane 41.34 37.56
KXG26179 Sorghum plasma membrane 37.98 37.31
EES05152 Sorghum peroxisome 35.4 37.28
EES10707 Sorghum plasma membrane 35.53 36.86
KXG34053 Sorghum cytosol, peroxisome, plasma membrane, plastid 36.82 36.77
EER99435 Sorghum plasma membrane 39.41 36.18
CDX85579 Canola plasma membrane 66.41 35.89
EER91312 Sorghum cytosol, peroxisome, plasma membrane 37.08 35.26
EES10698 Sorghum cytosol, peroxisome, plasma membrane 35.66 35.03
CDX91017 Canola plasma membrane 68.09 34.53
KXG38125 Sorghum cytosol 36.69 34.3
KXG38128 Sorghum plasma membrane 34.88 33.33
EER91310 Sorghum plasma membrane 33.98 32.19
EES12835 Sorghum cytosol, nucleus, plasma membrane 34.24 31.1
OQU88287 Sorghum plasma membrane 36.3 30.18
Bra023491.1-P Field mustard cytosol, extracellular, mitochondrion, plastid 0.0 0.0
Protein Annotations
MapMan:24.2.3.11UniProt:A0A194YSL7GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810
GO:GO:0006811GO:GO:0006813GO:GO:0008150GO:GO:0009987GO:GO:0015079GO:GO:0016020
GO:GO:0016021GO:GO:0071805InterPro:K+_transporterEnsemblPlants:KXG30825ProteinID:KXG30825ProteinID:KXG30825.1
PFAM:PF02705PANTHER:PTHR30540PANTHER:PTHR30540:SF10EnsemblPlantsGene:SORBI_3004G250700TIGRFAMs:TIGR00794TMHMM:TMhelix
UniParc:UPI0007F2F498SEG:seg::::
Description
hypothetical protein
Coordinates
chr4:-:59702812..59707816
Molecular Weight (calculated)
86291.7 Da
IEP (calculated)
7.610
GRAVY (calculated)
0.309
Length
774 amino acids
Sequence
(BLAST)
001: MDLEAAGGGE AAQRKRRNGE SWRATLLLAY QSLGVVYGDV ATSPLYVYKS AFAGNDIQHS EGNEEIYGVL SFVFWTLTLI TLVKYVLIVL RADDGGEGGT
101: FALYSLICRH VRAGLLPGGG TRDELMEEDK VTGRRGERPV SRVRAVLEKY RVLQRLLLLF ALLGTCMVIG DGVLTPAVSV FSAVSGLELS LEKEQHKYIE
201: LPVACAILIC LFALQHYGTH KVGFLFAPIV CIWLLCISAI GLYNIIHWDH HVYRALSPYY MYQFLRKTQT GGWMSLGGIL LCVTGSEAMY ADLGHFSQSS
301: IQIAFISLVY PALVLAYMGQ AAFISQHHNI ESSYHIGFYV SVPETLRWPV LVIAILAAVV GSQAIITGTF SIIKQCSSLS CFPGVKIVHT SSTVHGQIYI
401: PEINWMLMIL CLAVTIGFRD TKHLANAQGL AVITVMLVTT CLMSLVIVLC WNKSIFLALG FLLFFGTIEV IYFSAALVKF HEGAWVPITL SFIFMVVTCV
501: WHYGTIKKYE FDVQNKVSVN WLLNLGPSLG IVRVRGIGLI HTELMSGIPA IFSHFVTNLP AFHQVLVFLC VKSVPVPHVE PEERFLVGRI GPKEYRLYRV
601: IVRYGYRDVQ KDDLEFEKEL VSNIAEFIRS SGEYDKNGFV EDTDKPSEKL STISTGINMW EEDGELDASG TPHKEIDPHN AVPKQKKARF MIPKSAQVDS
701: EVRRELQELM DAREAGMSFI LGHSYMKAKS GSSFIKRIVI NFFYEFLRKN SRGPAYAANI PHASTLEVGM VYQV
Best Arabidopsis Sequence Match ( AT5G14880.1 )
(BLAST)
001: MDLERLSPRN PVKKESWWTV LTLAYQSLGV VYGDLATSPL YVYKSTFAED ITHSETNEEI FGVLSLIFWT LTLIPLVKYV FIVLRADDNG EGGTFALYSL
101: LCRHARISSL PNFQLADEDL SEYKKNSGEN PMRLKVPGWS LKNTLEKHKF LQNMLLVLAL IGTCMVIGDG VLTPAISVFS AVSGLELSMS KQQHQYVEVP
201: VVCAILILLF SLQHYGTHRL GFVFAPIVLA WLLCISTIGV YNIFHWNPHV YKALSPYYIY KFLKKTRKRG WMSLGGILLC ITGSEAMFAD LGHFTQLSIQ
301: IAFTFAVYPS LILAYMGQAA YLSKHHVLQS DYRIGFYVSV PEQIRWPVLA IAILAAVVGS QAIITGTFSI IKQCTSLGCF PKVKIVHTSS RMHGQIYIPE
401: INWTLMLLCL AVTVGFRDTK HISNASGLAV ITVMLVTTCL MSLVIVLCWR KSSLYALAFI FFFGTIEVLY FSASLIKFLE GAWVPVALSF IFLLIMYVWH
501: YGTLKRYEFD VQNKVSINWL LTLFGSSNLG IVRVHGIGVI NTELVSGIPA IFSHFITNLP AFHQVVVFLC VKSVPVPHVK PEERFLVGRV GPKEYRLYRC
601: IARYGYRDVH KDDVEFENDL ICSIAEFIRS DKPLNYSPDP ENESGINERL TVVAASSSNL EGVQIYEDDG SDKQEPSSSS EVIMVAPSPR FKKRVRFVLP
701: ESARIDRSAE EELTELTEAR EAGMAFIMGH SYVRAKSGSS VMKKIAINFG YDFLRRNSRG PCYGLSTPHA STLEVGMVYI V
Arabidopsis Description
POT8Potassium transporter [Source:UniProtKB/TrEMBL;Acc:A0A178UBD9]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.