Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plasma membrane 4
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, plasma membrane
BaCelLo:nucleus
MultiLoc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX70151
CDX98843
CDY04950
CDY52149

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G70300.1 CDX70151 AT5G05410.1 18552202
AT1G70300.1 CDX98843 AT5G05410.1 18552202
AT1G70300.1 CDY04950 AT5G05410.1 18552202
AT1G70300.1 CDY52149 AT5G05410.1 18552202
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY57844 Canola plasma membrane 89.32 84.86
CDY43004 Canola plasma membrane 97.74 83.66
Bra007910.1-P Field mustard cytosol, plasma membrane, vacuole 66.02 78.82
CDY11599 Canola plasma membrane 92.78 78.6
AT1G70300.1 Thale cress plasma membrane 90.23 76.73
VIT_01s0026g00270.t01 Wine grape plasma membrane 81.5 69.67
GSMUA_Achr7P20040_001 Banana plasma membrane 70.53 68.37
GSMUA_Achr9P22670_001 Banana cytosol, peroxisome, plasma membrane 73.38 68.16
Solyc05g005740.2.1 Tomato cytosol, plasma membrane, vacuole 79.55 67.91
PGSC0003DMT400010525 Potato plasma membrane 79.1 67.52
GSMUA_Achr3P06140_001 Banana plasma membrane 70.68 65.83
KRH74619 Soybean plasma membrane 77.44 65.36
Solyc04g025880.2.1 Tomato plasma membrane 75.49 64.77
KRH45700 Soybean plasma membrane 75.49 64.03
KRG99315 Soybean plasma membrane 74.59 63.59
KRH69531 Soybean plasma membrane 70.68 63.0
KXG30825 Sorghum plasma membrane 71.58 61.5
Zm00001d017925_P004 Maize plasma membrane 71.43 61.45
Os02t0730300-01 Rice plasma membrane 71.13 61.43
Zm00001d051756_P004 Maize plasma membrane 70.38 60.94
TraesCS6B01G322300.3 Wheat plasma membrane 69.47 60.16
TraesCS6D01G273100.1 Wheat plasma membrane 69.47 60.16
TraesCS7B01G116700.2 Wheat plasma membrane 69.47 59.92
TraesCS6A01G291900.2 Wheat plasma membrane 69.17 59.82
TraesCS7D01G211800.1 Wheat plasma membrane 69.32 59.79
Zm00001d046679_P002 Maize plasma membrane 73.68 59.61
EER90068 Sorghum peroxisome 73.38 59.51
TraesCS7A01G209900.1 Wheat plasma membrane 68.87 59.33
GSMUA_Achr1P09670_001 Banana plasma membrane 60.15 58.91
TraesCS7B01G295600.2 Wheat plasma membrane 72.93 58.79
TraesCS7D01G388900.2 Wheat plasma membrane 72.93 58.65
TraesCS7A01G393600.1 Wheat plasma membrane 72.93 58.5
HORVU6Hr1G073030.13 Barley plasma membrane, vacuole 69.32 58.5
PGSC0003DMT400035889 Potato plasma membrane 43.31 58.3
Os06t0270200-00 Rice plasma membrane 67.37 58.18
EER89587 Sorghum plasma membrane 67.52 58.09
Zm00001d037305_P001 Maize plasma membrane 67.07 58.0
Os06t0625900-01 Rice vacuole 73.38 57.89
CDX93172 Canola cytosol, golgi, plasma membrane 65.56 56.11
CDY06982 Canola plasma membrane 65.41 56.06
HORVU7Hr1G042800.11 Barley mitochondrion, plasma membrane 64.51 55.0
HORVU7Hr1G092940.2 Barley plastid 72.93 54.93
Zm00001d036784_P002 Maize plasma membrane 69.17 54.44
CDY02026 Canola plasma membrane 56.69 52.95
CDY24033 Canola plasma membrane 56.24 52.68
CDY10706 Canola plasma membrane 56.54 52.66
CDX84861 Canola plasma membrane 56.24 52.6
CDY28663 Canola plasma membrane 53.98 46.62
CDX84264 Canola cytosol, peroxisome, plasma membrane 48.72 44.51
CDY44124 Canola plasma membrane 52.03 44.25
CDY27164 Canola cytosol, peroxisome, plasma membrane 50.23 44.12
CDY57658 Canola plasma membrane 46.17 43.55
CDY12441 Canola plasma membrane 50.38 42.19
CDY31662 Canola cytosol, peroxisome, plasma membrane 49.32 41.68
CDY01623 Canola cytosol, peroxisome, plasma membrane 48.57 40.48
CDY51891 Canola cytosol, peroxisome, plasma membrane 47.97 40.38
CDX98647 Canola cytosol, peroxisome, plasma membrane 48.27 39.73
CDX98648 Canola cytosol 47.82 39.26
CDY53008 Canola cytosol, peroxisome, plasma membrane 47.37 39.18
CDX78964 Canola cytosol, peroxisome, plasma membrane 47.82 39.16
CDY64551 Canola cytosol, peroxisome, plasma membrane 47.37 38.99
CDY65345 Canola plasma membrane 45.41 38.04
CDX67610 Canola cytosol, peroxisome, plasma membrane 41.2 36.68
CDY01618 Canola cytosol, peroxisome, plasma membrane 39.1 36.67
CDY07520 Canola cytosol, peroxisome, plasma membrane 42.26 35.84
CDX85579 Canola plasma membrane 75.94 35.27
CDY54954 Canola cytosol, peroxisome, plasma membrane 47.22 34.93
CDY23894 Canola cytosol, golgi, plasma membrane 66.47 34.69
CDX91017 Canola plasma membrane 76.99 33.55
CDY24518 Canola cytosol, peroxisome, plasma membrane 47.37 32.98
CDX68987 Canola cytosol, nucleus, plasma membrane 40.3 31.53
CDX78358 Canola cytosol, nucleus, plasma membrane 40.6 31.25
CDX81125 Canola cytosol, nucleus, plasma membrane 40.6 31.25
CDX75364 Canola cytosol, nucleus, plasma membrane 40.0 31.07
HORVU7Hr1G053250.1 Barley cytosol 8.87 28.1
CDY03756 Canola cytosol 0.6 5.88
CDY65138 Canola cytosol 0.15 0.97
Protein Annotations
EnsemblPlants:CDY03755EnsemblPlantsGene:GSBRNA2T00116584001GO:A0A078EP54GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0009987GO:GO:0015079GO:GO:0016020GO:GO:0071805
InterPro:K+_transporterPANTHER:PTHR30540PANTHER:PTHR30540:SF10PFAM:PF02705ProteinID:CDY03755ProteinID:CDY03755.1
SEG:segTIGRFAMs:TIGR00794TMHMM:TMhelixUniParc:UPI0004EECCEDMapMan:24.2.3.11:
Description
BnaA02g14820D
Coordinates
chrLK031945:+:986057..989887
Molecular Weight (calculated)
74335.5 Da
IEP (calculated)
8.535
GRAVY (calculated)
0.445
Length
665 amino acids
Sequence
(BLAST)
001: MDIESRTYQN IIKKESWRTV LTLAYQSLGV VYGDLSTSPL YVYKSTFAED IHHTESNDEI FGVLSFIFWT ITLVPLFKYV FIVLRADDNG EGGTFALYSL
101: LCRHARVNSL PSCQLADEQL IEYNGSSSEE MAAQTGFAAR LKSTLEKQRV LQKVLLVLAL IGTCMVIGDG VLTPAISVFS AVSGVELSTA KEHHKYIEVP
201: AACIILIGLF ALQHYGTHRV GFLFAPVILL WLMCISAIGV YNIIHWNPHV YQALSPYYMY KFLKKTQSRG WMSLGGILLC ITGSEAMFAD LGHFSQLSIQ
301: IAFTSLVYPS LILAYMGQAA YLSQHHAIAS EYNIGFYVSV PEKLRWPVLV IAILAAVVGS QAIITGTFSI IKQCSALGCF PKVKIVHTSS KIHGQIYIPE
401: INWILMILCL AVTIGFRDTR RLGNASGLAV ITVMLVTTCL MSLVIVLCWH KNIFFAIAFV LFFGTIESLY FSASLIKFLE GAWVPIALSL CFLAAMCTWH
501: YGTLKRYEFD VQNKVSVNWL LSLGQTLGIK RVRGIGLIHT ELVSGVPAIF SHFVTNLPAF HQVLVFLCVK SVPVPHVRPE ERFLVGRVGP KQFRMYRCIV
601: RYGYRDVHKD DIEFEGDLVC SIAEFVRSEA ETAVVETNGE GERMAVVGTC STYMQGRRRV RSRRK
Best Arabidopsis Sequence Match ( AT1G70300.1 )
(BLAST)
001: MEIESGSYQN AKKESWRTVL TLAYQSLGVV YGDLSISPLY VYKSTFAEDI HHSESNEEIF GVLSFIFWTI TLVPLLKYVF IVLRADDNGE GGTFALYSLL
101: CRHARVNSLP SCQLADEQLI EYKTDSIGSS SMPQSGFAAS LKSTLEKHGV LQKILLVLAL IGTCMVIGDG VLTPAISVFS AVSGVELSMS KEHHKYIELP
201: AACVILIGLF ALQHYGTHRV GFLFAPVILL WLMCISAIGV YNIFHWNPHV YQALSPYYMY KFLKKTQSRG WMSLGGILLC ITGSEAMFAD LGHFSQLSIK
301: IAFTSLVYPS LILAYMGQAA YLSQHHIIES EYNIGFYVSV PERLRWPVLV IAILAAVVGS QAIITGTFSI IKQCSALGCF PKVKIVHTSS KIHGQIYIPE
401: INWILMVLCL AVTIGFRDTK RLGNASGLAV ITVMLVTTCL MSLVIVLCWH KSVIFAIVFV VFFGTIESLY FSASLIKFLE GAWVPIALAF CFLLAMCTWH
501: YGTLKRYEYD VQNKVSVNWL LSLSQTLGIA RVRGLGLIHT ELVSGVPAIF SHFVTNLPAF HQVLVFLCVK SVPVPHVRPQ ERFLVGRIGP KEFRIYRCIV
601: RFGYRDVHKD DFEFEGDLVC SIAEFIRTEA ETAATAAETN GEDDDRMSVV GTCSTYMQGI EDHYESDIDD PDKPGTSEIR SPKPKKKSKS KVKKRVRFVV
701: PETPKIEKET RQELMELTEA REGGVAYIMG NAYMKAKPGS GLLKRLAINI GYEFLRRNTR GPRNMLTSPH ASTLEVGMIY NV
Arabidopsis Description
POT6Potassium transporter 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8W4I4]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.