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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, mitochondrion

Predictor Summary:
  • plasma membrane 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion, plasma membrane
Any Predictor:mitochondrion, plasma membrane
MultiLoc:plasma membrane
TargetP:mitochondrion
PPI

Inferred distinct locusB in Crop

locusBlocations
HORVU1Hr1G060490.5
HORVU6Hr1G050500.2
HORVU6Hr1G050520.2

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G70300.1 HORVU1Hr1G060490.5 AT5G05410.1 18552202
AT1G70300.1 HORVU6Hr1G050500.2 AT5G05410.1 18552202
AT1G70300.1 HORVU6Hr1G050520.2 AT5G05410.1 18552202
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU7Hr1G053250.1 Barley cytosol 26.67 99.05
TraesCS7D01G211800.1 Wheat plasma membrane 86.92 87.94
TraesCS7B01G116700.2 Wheat plasma membrane 86.92 87.94
TraesCS7A01G209900.1 Wheat plasma membrane 86.54 87.44
Os06t0270200-00 Rice plasma membrane 73.33 74.29
EER89587 Sorghum plasma membrane 73.08 73.74
Zm00001d037305_P001 Maize plasma membrane 72.44 73.47
HORVU6Hr1G073030.13 Barley plasma membrane, vacuole 71.54 70.81
CDY57844 Canola plasma membrane 60.26 67.14
GSMUA_Achr9P22670_001 Banana cytosol, peroxisome, plasma membrane 60.26 65.64
PGSC0003DMT400035889 Potato plasma membrane 41.28 65.18
CDY03755 Canola plasma membrane 55.0 64.51
VIT_14s0066g01580.t01 Wine grape plasma membrane 63.46 63.22
VIT_01s0026g00270.t01 Wine grape plasma membrane 62.69 62.85
GSMUA_Achr1P09670_001 Banana plasma membrane 54.49 62.59
KRG93348 Soybean plasma membrane 62.56 62.56
KRH20327 Soybean plasma membrane 62.05 62.13
PGSC0003DMT400001329 Potato cytosol, golgi, plasma membrane 61.41 62.05
Solyc02g087000.2.1 Tomato plasma membrane 61.54 61.94
CDY43004 Canola plasma membrane 61.67 61.9
Bra016225.1-P Field mustard cytosol, plasma membrane, vacuole 61.92 61.69
PGSC0003DMT400010525 Potato plasma membrane 61.41 61.49
CDY11599 Canola plasma membrane 61.79 61.4
Solyc05g005740.2.1 Tomato cytosol, plasma membrane, vacuole 61.15 61.23
AT5G14880.1 Thale cress plasma membrane 61.15 61.08
AT1G70300.1 Thale cress plasma membrane 61.03 60.87
KRH69531 Soybean plasma membrane 57.95 60.59
Solyc04g025880.2.1 Tomato plasma membrane 60.0 60.39
CDY03756 Canola cytosol 5.26 60.29
KRH74619 Soybean plasma membrane 59.62 59.01
KRG99315 Soybean plasma membrane 58.85 58.85
KRH45700 Soybean plasma membrane 58.97 58.67
HORVU7Hr1G092940.2 Barley plastid 62.82 55.49
Bra007910.1-P Field mustard cytosol, plasma membrane, vacuole 38.33 53.68
HORVU2Hr1G018190.12 Barley plasma membrane 53.59 51.48
HORVU2Hr1G020220.19 Barley plasma membrane 48.21 47.9
HORVU3Hr1G098670.4 Barley golgi, mitochondrion, plasma membrane 47.82 47.1
HORVU1Hr1G066230.3 Barley mitochondrion, plasma membrane 46.15 45.63
HORVU7Hr1G107400.6 Barley plastid 46.03 42.28
Bra023490.1-P Field mustard cytosol, plasma membrane, vacuole 61.03 38.39
HORVU2Hr1G098940.4 Barley plasma membrane 38.97 38.38
HORVU5Hr1G090010.6 Barley plasma membrane 39.36 38.09
HORVU1Hr1G009100.7 Barley plasma membrane 39.1 37.79
HORVU1Hr1G066970.3 Barley cytosol, peroxisome 32.05 33.69
HORVU3Hr1G104870.4 Barley peroxisome, plasma membrane 32.82 33.6
HORVU4Hr1G079150.2 Barley peroxisome 32.82 33.25
HORVU3Hr1G096860.11 Barley cytosol, peroxisome 33.72 33.0
HORVU2Hr1G071570.3 Barley peroxisome 32.31 32.52
CDX85579 Canola plasma membrane 59.49 32.4
HORVU2Hr1G071630.1 Barley plasma membrane 32.18 32.39
HORVU2Hr1G047550.1 Barley plasma membrane 35.77 31.63
CDX91017 Canola plasma membrane 61.15 31.26
HORVU7Hr1G059920.1 Barley cytosol 3.21 30.49
HORVU5Hr1G059200.3 Barley mitochondrion, peroxisome 37.56 29.1
HORVU2Hr1G064770.6 Barley mitochondrion, peroxisome, plastid 32.82 27.95
HORVU2Hr1G099810.3 Barley vacuole 30.51 27.77
Bra023491.1-P Field mustard cytosol, extracellular, mitochondrion, plastid 0.0 0.0
Protein Annotations
MapMan:24.2.3.11UniProt:A0A287W8S8ncoils:CoilGO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0006811GO:GO:0006813GO:GO:0008150GO:GO:0009987GO:GO:0015079
GO:GO:0016020GO:GO:0016021GO:GO:0071805EnsemblPlantsGene:HORVU7Hr1G042800EnsemblPlants:HORVU7Hr1G042800.11InterPro:K+_transporter
PFAM:PF02705PANTHER:PTHR30540PANTHER:PTHR30540:SF17TIGRFAMs:TIGR00794TMHMM:TMhelixUniParc:UPI000B47891D
SEG:seg:::::
Description
Potassium transporter [Source:UniProtKB/TrEMBL;Acc:A0A287W8S8]
Coordinates
chrchr7H:-:125737128..125742585
Molecular Weight (calculated)
79363.3 Da
IEP (calculated)
7.668
GRAVY (calculated)
0.311
Length
780 amino acids
Sequence
(BLAST)
001: MDAESGGGAA RRKVSRGGLQ PWSAELLLAY QSLGVVYGDV ATSPLYVFKS AFAGGDIEHS AGNEEIYGVL SLVFWTLTLI PLLKYVLVVL RADDHGEGGT
101: FALYSLICRR VRAGLLPDXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXLELE LDNEQHEYIL
201: LPVTCAILVG LFTLQHYGTH RVGFLFAPIV CLWLLCISII GLYNIIHWNP HVYRALSPYY MYKFLQKTQT GGWMSLGGIL LCVTGSEAMY ADLGHFSQSS
301: IKIAFTSLVY PALILAYMGQ AAYISRHHNF ENINHIGFYV SVPEKIRWPV LVIAILAAVV GSQAVITGTF SIIKQCCSLS CFPRVKIVHT SSTVHGQIYI
401: PEINWILMIL CLAVTIGFRD TKHLTNAQGL AVITVMLVTT CLMSLVIVLC WNKSILFSLA FLLFFGAIEV LYFSASLVKF REGAWVPVML SLFFMIMMCV
501: WHYGTIKKYE FDVENKVSIS WLLNLGPSLG IVRVRGIGLI HTELMSGIPA IFSHFVTNLP AFHQVLVFLC IKSVPIPHIR PEERFWVGRV GPKQYRLYRV
601: VVRYGYRDVP KDDIEFEKDL VCSIAEFIRC GDSDDQNGFL DGATDHTCER LSSISKGLPF QEEDGSEING SDSSILSTDK EMYQNTIGPK AKRVRFVLPK
701: DAQIDSEVRS ELQELTDARE AGMSFITGRA HMKAKSGSGL VKKIAINYIY EFLRRNSRGS VSAANIPHAS TLEVGMVCQM
Best Arabidopsis Sequence Match ( AT1G70300.1 )
(BLAST)
001: MEIESGSYQN AKKESWRTVL TLAYQSLGVV YGDLSISPLY VYKSTFAEDI HHSESNEEIF GVLSFIFWTI TLVPLLKYVF IVLRADDNGE GGTFALYSLL
101: CRHARVNSLP SCQLADEQLI EYKTDSIGSS SMPQSGFAAS LKSTLEKHGV LQKILLVLAL IGTCMVIGDG VLTPAISVFS AVSGVELSMS KEHHKYIELP
201: AACVILIGLF ALQHYGTHRV GFLFAPVILL WLMCISAIGV YNIFHWNPHV YQALSPYYMY KFLKKTQSRG WMSLGGILLC ITGSEAMFAD LGHFSQLSIK
301: IAFTSLVYPS LILAYMGQAA YLSQHHIIES EYNIGFYVSV PERLRWPVLV IAILAAVVGS QAIITGTFSI IKQCSALGCF PKVKIVHTSS KIHGQIYIPE
401: INWILMVLCL AVTIGFRDTK RLGNASGLAV ITVMLVTTCL MSLVIVLCWH KSVIFAIVFV VFFGTIESLY FSASLIKFLE GAWVPIALAF CFLLAMCTWH
501: YGTLKRYEYD VQNKVSVNWL LSLSQTLGIA RVRGLGLIHT ELVSGVPAIF SHFVTNLPAF HQVLVFLCVK SVPVPHVRPQ ERFLVGRIGP KEFRIYRCIV
601: RFGYRDVHKD DFEFEGDLVC SIAEFIRTEA ETAATAAETN GEDDDRMSVV GTCSTYMQGI EDHYESDIDD PDKPGTSEIR SPKPKKKSKS KVKKRVRFVV
701: PETPKIEKET RQELMELTEA REGGVAYIMG NAYMKAKPGS GLLKRLAINI GYEFLRRNTR GPRNMLTSPH ASTLEVGMIY NV
Arabidopsis Description
POT6Potassium transporter 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8W4I4]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.