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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plasma membrane 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, nucleus, plasma membrane
BaCelLo:nucleus
MultiLoc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra023490.1-P Field mustard cytosol, plasma membrane, vacuole 79.23 97.5
Bra023491.1-P Field mustard cytosol, extracellular, mitochondrion, plastid 10.09 96.86
CDX85579 Canola plasma membrane 89.52 95.39
AT5G14880.1 Thale cress plasma membrane 48.36 94.49
CDY57844 Canola plasma membrane 35.91 78.29
PGSC0003DMT400001329 Potato cytosol, golgi, plasma membrane 39.38 77.85
VIT_14s0066g01580.t01 Wine grape plasma membrane 39.91 77.78
KRG93348 Soybean plasma membrane 39.58 77.44
KRH20327 Soybean plasma membrane 39.45 77.28
Solyc02g087000.2.1 Tomato plasma membrane 39.19 77.16
CDY03755 Canola plasma membrane 33.55 76.99
GSMUA_Achr9P22670_001 Banana cytosol, peroxisome, plasma membrane 35.98 76.68
GSMUA_Achr7P20040_001 Banana plasma membrane 34.21 76.09
CDY43004 Canola plasma membrane 37.42 73.49
CDY11599 Canola plasma membrane 37.42 72.74
GSMUA_Achr3P06140_001 Banana plasma membrane 33.55 71.71
Os02t0730300-01 Rice plasma membrane 34.67 68.7
Zm00001d017925_P004 Maize plasma membrane 34.53 68.18
KXG30825 Sorghum plasma membrane 34.53 68.09
Zm00001d051756_P004 Maize plasma membrane 34.01 67.58
TraesCS6B01G322300.3 Wheat plasma membrane 34.01 67.58
TraesCS7B01G295600.2 Wheat plasma membrane 36.37 67.27
TraesCS7D01G388900.2 Wheat plasma membrane 36.44 67.23
TraesCS6D01G273100.1 Wheat plasma membrane 33.81 67.19
Zm00001d037305_P001 Maize plasma membrane 33.81 67.1
TraesCS7A01G393600.1 Wheat plasma membrane 36.44 67.07
TraesCS6A01G291900.2 Wheat plasma membrane 33.75 66.97
TraesCS7B01G116700.2 Wheat plasma membrane 33.75 66.8
TraesCS7D01G211800.1 Wheat plasma membrane 33.49 66.28
CDY03756 Canola cytosol 2.95 66.18
EER89587 Sorghum plasma membrane 33.49 66.11
Os06t0625900-01 Rice vacuole 36.5 66.07
TraesCS7A01G209900.1 Wheat plasma membrane 33.42 66.06
EER90068 Sorghum peroxisome 35.45 65.98
Zm00001d046679_P002 Maize plasma membrane 35.52 65.94
Os06t0270200-00 Rice plasma membrane 33.22 65.84
HORVU6Hr1G073030.13 Barley plasma membrane, vacuole 33.95 65.74
GSMUA_Achr1P09670_001 Banana plasma membrane 28.77 64.65
CDX93172 Canola cytosol, golgi, plasma membrane 32.04 62.93
HORVU7Hr1G092940.2 Barley plastid 36.37 62.85
CDY06982 Canola plasma membrane 31.91 62.76
HORVU7Hr1G042800.11 Barley mitochondrion, plasma membrane 31.26 61.15
Zm00001d036784_P002 Maize plasma membrane 33.16 59.88
CDY24033 Canola plasma membrane 26.28 56.48
CDY02026 Canola plasma membrane 26.34 56.46
CDY10706 Canola plasma membrane 26.34 56.3
CDX84861 Canola plasma membrane 26.21 56.26
CDY28663 Canola plasma membrane 26.54 52.6
HORVU7Hr1G053250.1 Barley cytosol 6.88 50.0
CDX84264 Canola cytosol, peroxisome, plasma membrane 23.39 49.04
CDY27164 Canola cytosol, peroxisome, plasma membrane 23.85 48.08
CDY44124 Canola plasma membrane 24.64 48.08
CDY57658 Canola plasma membrane 22.15 47.94
CDY12441 Canola plasma membrane 24.18 46.47
CDY31662 Canola cytosol, peroxisome, plasma membrane 23.85 46.25
CDY51891 Canola cytosol, peroxisome, plasma membrane 23.59 45.57
CDY01623 Canola cytosol, peroxisome, plasma membrane 23.79 45.49
CDY53008 Canola cytosol, peroxisome, plasma membrane 23.79 45.15
CDY64551 Canola cytosol, peroxisome, plasma membrane 23.72 44.8
CDY23894 Canola cytosol, golgi, plasma membrane 37.22 44.58
CDX98647 Canola cytosol, peroxisome, plasma membrane 23.59 44.55
CDX78964 Canola cytosol, peroxisome, plasma membrane 23.53 44.21
CDX98648 Canola cytosol 23.46 44.2
CDY65345 Canola plasma membrane 22.28 42.82
CDY01618 Canola cytosol, peroxisome, plasma membrane 19.79 42.6
CDX67610 Canola cytosol, peroxisome, plasma membrane 19.86 40.56
CDY07520 Canola cytosol, peroxisome, plasma membrane 20.31 39.54
CDY54954 Canola cytosol, peroxisome, plasma membrane 22.61 38.38
CDX68987 Canola cytosol, nucleus, plasma membrane 20.58 36.94
CDY24518 Canola cytosol, peroxisome, plasma membrane 23.07 36.86
CDX78358 Canola cytosol, nucleus, plasma membrane 20.77 36.69
CDX81125 Canola cytosol, nucleus, plasma membrane 20.77 36.69
CDX75364 Canola cytosol, nucleus, plasma membrane 20.45 36.45
CDY65138 Canola cytosol 1.7 25.24
Protein Annotations
Gene3D:2.120.10.30MapMan:24.2.3.11InterPro:6-blade_b-propeller_TolB-likeGO:A0A078DQ43EnsemblPlants:CDX91017ProteinID:CDX91017
ProteinID:CDX91017.1ncoils:CoilGO:GO:0003674GO:GO:0005215GO:GO:0005488GO:GO:0005515
GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0009987GO:GO:0015079GO:GO:0016020
GO:GO:0071805EnsemblPlantsGene:GSBRNA2T00151780001InterPro:IPR011042InterPro:IPR013017InterPro:K+_transporterInterPro:NHL_repeat
InterPro:NHL_repeat_subgrPFAM:PF01436PFAM:PF02705PFscan:PS51125PANTHER:PTHR30540PANTHER:PTHR30540:SF18
SUPFAM:SSF101898TIGRFAMs:TIGR00794TMHMM:TMhelixUniParc:UPI0004EEBB9ESEG:seg:
Description
BnaC02g05800D
Coordinates
chrLK031865:-:346192..357179
Molecular Weight (calculated)
171559.0 Da
IEP (calculated)
8.176
GRAVY (calculated)
-0.137
Length
1526 amino acids
Sequence
(BLAST)
0001: MDLERLSPRN QVKKESWWTV LTLAYQSLGV VYGDLATSPL YVYKSTFAED IQHSETNEEI FGVLSLIFWT LTLIPLVKYV FIVLRADDNG EGGTFALYSL
0101: LCRHARISSL PNFQLADEDL SEYKKTSGDN PRNLKAKGWS LKNTLEKHKV LQNMLLVLAL IGTCMVIGDG VLTPAISVFS AVSGLELSMS KQQHQYVEVP
0201: VVCAILILLF SLQHYGTHRL GFLFAPIVLA WLLCISTIGV YNIFHWNPHV YKALSPYYIY KFLKKTGTRG WMSLGGILLC ITGSEAMFAD LGHFTQLSIQ
0301: IAFTFAVYPS LILAYMGQAA YLSKHHVLES DYRIGFYVSV PEKIRWPVLA IAILAAVVGS QAIITGTFSI IKQCTSLGCF PKVKIVHTSS KMHGQIYIPE
0401: INWTLMLLCL AVTVGFRDTK HISNASGLAV ITVMLVTTCL MSLVIVLCWR KSSLYALAFI FFFGTIESLY FSASLIKFLE GAWVPLALSF IFLLIMYVWH
0501: YGTVMRYEFD VQNKVSINWL LTLFGSSNLG IVRVRGIGVI NTELVSGIPA IFSHFITNLP AFHQVVVFLC VKSVPVPHVK PEERFLVGRV GPKEYRLYRC
0601: IARYGYRDVH KDDVEFEQDL ICSIAEFIRS DKAFDESPDR ENETGSNERL TVVAASSSNL EGVQIYEDDG EQSEVTEAQA PSPRAKKRVR FVLPESSRID
0701: RSAEEELTEL TEAREAGMAF IMGHSYVRAK SGSSVMKKMA INFGYDFLRR NSRGPCYGLS TPHASTLEVG MVYIVDVRVA CGIISAKPPP VKIVSGLVTN
0801: VASMLWKLLW SLQTSTTTTT TTKSGISSRS MVKYESGYNM ETVFDGSKLG IEPYAIEVSP NGEELIVLDS ENSNIHKISM PLSRYGKAKH VSGSQEGYTG
0901: HVDGKLKEAK MNRPRGLAID HSGNIYVADT NNMAIRKISD DGVSTIAVGG RRSGGSKEDM MRLSNDFDLI YVSSTCSLLV VDRGNQMIRE IHLHDHDCSH
1001: HEPETDLHLG NFSNKLGTAL LVAAAFFGYM FALLVRRVRS LFSSFRRDNK RHVAKPNMTM APYQRYPRPV RQQLIPPQYE PEKEEGFLGS LGKLVVKTGS
1101: SVSEMISGSR NVTPQDFQYH HQQQPDQWPP VQETFAIPEE DGPPGLEPRS GTNQDKAYLR AQGTKQNRSY YQDCDQYQNQ QKRNVSDTGK FEDNREKNEF
1201: VFGAVQEQNG RREAMVIKAV DFKEAMNDQR NLRPRINYMG YSSHIIIFFL LLMCYQIVGG ISLLKKMTFG RLVFWEDSSP TFREDRMRLN GGTPDLVCRH
1301: VSNISASMKN LPATTGGTLG LGLQRTQRKE RFKESNPNSV IPLFLSQPMG LQSFPISEMD TTDDMHEAMF AKRGCCLFLP CLGSSQPSSH GGSVCYIWWQ
1401: RIRTVDKLEP DERWWMSGWS KMREWSEILA GPKWKTFIRR VGRSHCCGGV GDGGGGGNRT DQVDFRYDSW SYSLNFDDGK QTGHFEDEFP YRDYSMRFTS
1501: PSLPVSTKCS VDFDNDNYAP PPPLVK
Best Arabidopsis Sequence Match ( AT5G14880.1 )
(BLAST)
001: MDLERLSPRN PVKKESWWTV LTLAYQSLGV VYGDLATSPL YVYKSTFAED ITHSETNEEI FGVLSLIFWT LTLIPLVKYV FIVLRADDNG EGGTFALYSL
101: LCRHARISSL PNFQLADEDL SEYKKNSGEN PMRLKVPGWS LKNTLEKHKF LQNMLLVLAL IGTCMVIGDG VLTPAISVFS AVSGLELSMS KQQHQYVEVP
201: VVCAILILLF SLQHYGTHRL GFVFAPIVLA WLLCISTIGV YNIFHWNPHV YKALSPYYIY KFLKKTRKRG WMSLGGILLC ITGSEAMFAD LGHFTQLSIQ
301: IAFTFAVYPS LILAYMGQAA YLSKHHVLQS DYRIGFYVSV PEQIRWPVLA IAILAAVVGS QAIITGTFSI IKQCTSLGCF PKVKIVHTSS RMHGQIYIPE
401: INWTLMLLCL AVTVGFRDTK HISNASGLAV ITVMLVTTCL MSLVIVLCWR KSSLYALAFI FFFGTIEVLY FSASLIKFLE GAWVPVALSF IFLLIMYVWH
501: YGTLKRYEFD VQNKVSINWL LTLFGSSNLG IVRVHGIGVI NTELVSGIPA IFSHFITNLP AFHQVVVFLC VKSVPVPHVK PEERFLVGRV GPKEYRLYRC
601: IARYGYRDVH KDDVEFENDL ICSIAEFIRS DKPLNYSPDP ENESGINERL TVVAASSSNL EGVQIYEDDG SDKQEPSSSS EVIMVAPSPR FKKRVRFVLP
701: ESARIDRSAE EELTELTEAR EAGMAFIMGH SYVRAKSGSS VMKKIAINFG YDFLRRNSRG PCYGLSTPHA STLEVGMVYI V
Arabidopsis Description
POT8Potassium transporter [Source:UniProtKB/TrEMBL;Acc:A0A178UBD9]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.