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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plasma membrane 3
  • extracellular 1
  • golgi 1
  • endoplasmic reticulum 1
  • vacuole 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, nucleus, plasma membrane
BaCelLo:nucleus
MultiLoc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra023491.1-P Field mustard cytosol, extracellular, mitochondrion, plastid 11.1 100.0
Bra023490.1-P Field mustard cytosol, plasma membrane, vacuole 81.63 94.27
CDX91017 Canola plasma membrane 95.39 89.52
AT5G14880.1 Thale cress plasma membrane 47.91 87.84
CDY57844 Canola plasma membrane 38.2 78.14
CDY03755 Canola plasma membrane 35.27 75.94
VIT_14s0066g01580.t01 Wine grape plasma membrane 40.85 74.71
PGSC0003DMT400001329 Potato cytosol, golgi, plasma membrane 40.15 74.48
KRG93348 Soybean plasma membrane 40.5 74.36
KRH20327 Soybean plasma membrane 40.36 74.2
GSMUA_Achr9P22670_001 Banana cytosol, peroxisome, plasma membrane 37.08 74.16
Solyc02g087000.2.1 Tomato plasma membrane 39.94 73.81
GSMUA_Achr7P20040_001 Banana plasma membrane 35.34 73.76
CDY43004 Canola plasma membrane 38.62 71.17
CDY11599 Canola plasma membrane 38.55 70.32
GSMUA_Achr3P06140_001 Banana plasma membrane 35.06 70.31
Os02t0730300-01 Rice plasma membrane 36.1 67.14
Zm00001d017925_P004 Maize plasma membrane 35.89 66.49
KXG30825 Sorghum plasma membrane 35.89 66.41
CDY03756 Canola cytosol 3.14 66.18
Zm00001d051756_P004 Maize plasma membrane 35.41 66.02
TraesCS6B01G322300.3 Wheat plasma membrane 35.34 65.89
TraesCS6D01G273100.1 Wheat plasma membrane 35.2 65.62
TraesCS6A01G291900.2 Wheat plasma membrane 35.06 65.28
Zm00001d037305_P001 Maize plasma membrane 34.85 64.89
TraesCS7B01G116700.2 Wheat plasma membrane 34.85 64.72
TraesCS7B01G295600.2 Wheat plasma membrane 37.22 64.61
TraesCS7D01G388900.2 Wheat plasma membrane 37.22 64.45
TraesCS7A01G393600.1 Wheat plasma membrane 37.22 64.29
HORVU6Hr1G073030.13 Barley plasma membrane, vacuole 35.34 64.21
EER89587 Sorghum plasma membrane 34.64 64.17
Os06t0270200-00 Rice plasma membrane 34.5 64.16
TraesCS7D01G211800.1 Wheat plasma membrane 34.5 64.07
TraesCS7A01G209900.1 Wheat plasma membrane 34.5 63.99
EER90068 Sorghum peroxisome 36.52 63.78
Os06t0625900-01 Rice vacuole 37.5 63.7
Zm00001d046679_P002 Maize plasma membrane 36.52 63.63
GSMUA_Achr1P09670_001 Banana plasma membrane 30.17 63.62
CDX93172 Canola cytosol, golgi, plasma membrane 32.96 60.75
CDY06982 Canola plasma membrane 32.82 60.57
HORVU7Hr1G092940.2 Barley plastid 37.22 60.36
HORVU7Hr1G042800.11 Barley mitochondrion, plasma membrane 32.4 59.49
Zm00001d036784_P002 Maize plasma membrane 33.94 57.51
CDY24033 Canola plasma membrane 27.86 56.2
CDY02026 Canola plasma membrane 27.93 56.18
CDY10706 Canola plasma membrane 27.93 56.02
CDX84861 Canola plasma membrane 27.79 55.98
CDY28663 Canola plasma membrane 27.86 51.82
CDX84264 Canola cytosol, peroxisome, plasma membrane 24.86 48.9
CDY27164 Canola cytosol, peroxisome, plasma membrane 25.14 47.56
CDY44124 Canola plasma membrane 25.63 46.93
CDY57658 Canola plasma membrane 22.97 46.67
CDY12441 Canola plasma membrane 25.35 45.72
CDY31662 Canola cytosol, peroxisome, plasma membrane 25.07 45.62
CDY01623 Canola cytosol, peroxisome, plasma membrane 25.07 44.99
CDY51891 Canola cytosol, peroxisome, plasma membrane 24.79 44.94
CDY53008 Canola cytosol, peroxisome, plasma membrane 25.0 44.53
CDY64551 Canola cytosol, peroxisome, plasma membrane 24.93 44.18
CDX98647 Canola cytosol, peroxisome, plasma membrane 24.86 44.06
HORVU7Hr1G053250.1 Barley cytosol 6.42 43.81
CDX98648 Canola cytosol 24.72 43.7
CDX78964 Canola cytosol, peroxisome, plasma membrane 24.65 43.47
CDY23894 Canola cytosol, golgi, plasma membrane 38.41 43.17
CDY65345 Canola plasma membrane 23.39 42.19
CDY01618 Canola cytosol, peroxisome, plasma membrane 20.67 41.75
CDX67610 Canola cytosol, peroxisome, plasma membrane 20.95 40.16
CDY07520 Canola cytosol, peroxisome, plasma membrane 21.44 39.16
CDY54954 Canola cytosol, peroxisome, plasma membrane 23.74 37.82
CDX68987 Canola cytosol, nucleus, plasma membrane 21.65 36.47
CDY24518 Canola cytosol, peroxisome, plasma membrane 24.16 36.23
CDX78358 Canola cytosol, nucleus, plasma membrane 21.86 36.23
CDX81125 Canola cytosol, nucleus, plasma membrane 21.86 36.23
CDX75364 Canola cytosol, nucleus, plasma membrane 21.51 35.98
CDY65138 Canola cytosol 1.68 23.3
Protein Annotations
Gene3D:2.120.10.30MapMan:24.2.3.11InterPro:6-blade_b-propeller_TolB-likeGO:A0A078DB93EnsemblPlants:CDX85579ProteinID:CDX85579
ProteinID:CDX85579.1GO:GO:0003674GO:GO:0005215GO:GO:0005488GO:GO:0005515GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0009987GO:GO:0015079GO:GO:0016020GO:GO:0071805
EnsemblPlantsGene:GSBRNA2T00143299001InterPro:IPR011042InterPro:IPR013017InterPro:K+_transporterInterPro:NHL_repeatInterPro:NHL_repeat_subgr
PFAM:PF01436PFAM:PF02705PFscan:PS51125PANTHER:PTHR30540PANTHER:PTHR30540:SF18SUPFAM:SSF101898
TIGRFAMs:TIGR00794TMHMM:TMhelixUniParc:UPI0004EE5B3FSEG:seg::
Description
BnaA02g02340D
Coordinates
chrLK031842:-:730056..738974
Molecular Weight (calculated)
161240.0 Da
IEP (calculated)
8.317
GRAVY (calculated)
-0.145
Length
1432 amino acids
Sequence
(BLAST)
0001: MDLERLSPRN QVKKESWWTV LTLAYQSLGV VYGDLATSPL YVYKSTFAED IQHSETNEEI FGVLSLIFWT LTLIPLVKYV IIVLRADDNG EGGTFALYSL
0101: LCRHARISSL PNFQLADEDL SEYKKTSGDN PRNLKAKGWS LKNTLEKHKV LQNMLLVLAL IGTCMVIGDG VLTPAISVFS AVSGLELSMS KQQHQYVEVP
0201: VVCAILILLF SLQHYGTHRL GFLFAPIVLA WLLCISTIGV YNIFHWNPHV YKALSPYYIY KFLKKTGTRG WMSLGGILLC ITGSEAMFAD LGHFTQLSIQ
0301: IAFTFAVYPS LILAYMGQAA YLSKHHVLES DYRIGFYVSV PEKIRWPVLA IAILAAVVGS QAIITGTFSI IKQCTSLGCF PKVKIVHTSS KMHGQIYIPE
0401: INWTLMLLCL AVTVGFRDTK HISNASGLAV ITVMLVTTCL MSLVIVLCWR KSSLYALAFI FFFGTIESLY FSASLIKFLE GAWVPLALSF IFLLIMYVWH
0501: YGTVMRYEFD VQNKVSINWL LTLFGSSNLG IVRVRGIGVI NTELVSGIPA IFSHFITNLP AFHQVVVFLC VKSVPVPHVK PEERFLVGRV GPKEYRLYRC
0601: IARYGYRDVH KDDVEFEQDL ICSIAEFIRS DKAFDEIDRS AEEELTELTE AREAGMAFIM GHSYVRAKSG SSVMKKMAIN FGYDFLRRNS RGPCYGLSTP
0701: HASTLEVGMV YIVDVRVACG IISAKPPPVK IVSGLVTNVA SMLWKLLWSL QTSTTTTTTT KSGVSSRSMV KYESGYNIET VFDGSKLGIE PYAIEVSPNG
0801: EELIVLDSEN SNIHKISMPL SRYGKAKLVS GSQEGYTGHV DGKLKEAKMN RPRGLAIDDS GNIYVADTNN MAIRKISDDG VSTIGVGGRR SGGSKEEMMR
0901: LSNDFDLIYV SSTCSLLVTD RGNQMIREIQ LHDHDCSHHE PETDLHLGTA LLVAAAFFGY MLALLVRRVR SLFSSFRHDN KRHHVAKPNM TMAPYQRYPR
1001: PVRQPLIPPQ HEPEKEEGFL GSLGKLVVKT GSSVSEMISG SRNVTPESFQ YRNQQQPDQW APVQESFAIP EEDGPPGLEP RSGTNTDKTY LRAQGTKQNR
1101: SYYQDYDQYE NQQKRNVNDT GKFEDNREKN EFVFGAVQEQ DGRREAMVIK AVDFNEAMND QRNLRPRINY MGYSSHKNDN WPASILGRFF PTFREDRMRL
1201: NGGTPDLVCR HVSNISASMK NLPATTFMVE NRKAGWREHR GRKDSKNRIQ TLFLSQPMGL QSFPISEMDT TDDMHEAMFA KRGCCLFLPC LGSSQPSSHG
1301: GSVWWQRIRT VDKLEPDERW WMSGWSKMRE WSEILAGPKW KTFIRRVGRS HCCGGVGDGG GGGNRTDHVD FRYDSWSYSL NFDDGKQTGH FEDEFPYRDY
1401: SMRFTSPSLP VSTKSSIDFD NDSYAPPLPL VK
Best Arabidopsis Sequence Match ( AT5G14880.1 )
(BLAST)
001: MDLERLSPRN PVKKESWWTV LTLAYQSLGV VYGDLATSPL YVYKSTFAED ITHSETNEEI FGVLSLIFWT LTLIPLVKYV FIVLRADDNG EGGTFALYSL
101: LCRHARISSL PNFQLADEDL SEYKKNSGEN PMRLKVPGWS LKNTLEKHKF LQNMLLVLAL IGTCMVIGDG VLTPAISVFS AVSGLELSMS KQQHQYVEVP
201: VVCAILILLF SLQHYGTHRL GFVFAPIVLA WLLCISTIGV YNIFHWNPHV YKALSPYYIY KFLKKTRKRG WMSLGGILLC ITGSEAMFAD LGHFTQLSIQ
301: IAFTFAVYPS LILAYMGQAA YLSKHHVLQS DYRIGFYVSV PEQIRWPVLA IAILAAVVGS QAIITGTFSI IKQCTSLGCF PKVKIVHTSS RMHGQIYIPE
401: INWTLMLLCL AVTVGFRDTK HISNASGLAV ITVMLVTTCL MSLVIVLCWR KSSLYALAFI FFFGTIEVLY FSASLIKFLE GAWVPVALSF IFLLIMYVWH
501: YGTLKRYEFD VQNKVSINWL LTLFGSSNLG IVRVHGIGVI NTELVSGIPA IFSHFITNLP AFHQVVVFLC VKSVPVPHVK PEERFLVGRV GPKEYRLYRC
601: IARYGYRDVH KDDVEFENDL ICSIAEFIRS DKPLNYSPDP ENESGINERL TVVAASSSNL EGVQIYEDDG SDKQEPSSSS EVIMVAPSPR FKKRVRFVLP
701: ESARIDRSAE EELTELTEAR EAGMAFIMGH SYVRAKSGSS VMKKIAINFG YDFLRRNSRG PCYGLSTPHA STLEVGMVYI V
Arabidopsis Description
POT8Potassium transporter [Source:UniProtKB/TrEMBL;Acc:A0A178UBD9]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.