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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, nucleus, cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 1
  • mitochondrion 1
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, nucleus, plasma membrane
Any Predictor:cytosol, nucleus, plasma membrane
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra006020.1-P Field mustard cytosol, nucleus, plasma membrane 99.77 99.77
CDX81125 Canola cytosol, nucleus, plasma membrane 99.54 99.54
AT5G09400.1 Thale cress cytosol, nucleus, plasma membrane 91.44 92.07
KRH10537 Soybean nucleus 75.46 77.53
VIT_12s0142g00170.t01 Wine grape extracellular 54.05 77.06
PGSC0003DMT400032781 Potato cytosol, peroxisome, plasma membrane 75.46 76.8
KRH43903 Soybean nucleus 74.77 76.72
PGSC0003DMT400042977 Potato cytosol, golgi, plastid 23.5 76.6
KRH58275 Soybean cytosol, nucleus, plasma membrane 74.19 75.77
Solyc01g105150.2.1 Tomato cytosol, peroxisome, plasma membrane 75.35 75.61
KRH42159 Soybean cytosol, peroxisome, plasma membrane 74.07 75.56
Solyc10g047270.1.1 Tomato cytosol, peroxisome, plasma membrane 74.31 75.44
GSMUA_Achr9P11540_001 Banana cytosol, nucleus, plasma membrane 70.83 74.09
GSMUA_Achr8P15870_001 Banana cytosol, peroxisome, plasma membrane 60.42 74.04
CDX68987 Canola cytosol, nucleus, plasma membrane 72.34 73.53
CDX75364 Canola cytosol, nucleus, plasma membrane 72.11 72.78
Os07t0509200-01 Rice plasma membrane 35.76 71.2
TraesCS2B01G249100.1 Wheat plasma membrane 68.52 69.4
TraesCS2D01G231500.1 Wheat plasma membrane 68.29 69.17
TraesCS2A01G225600.1 Wheat plasma membrane 68.17 69.05
EER99435 Sorghum plasma membrane 67.13 68.8
HORVU2Hr1G047550.1 Barley plasma membrane 66.78 65.42
Zm00001d021592_P001 Maize plasma membrane 64.93 63.53
Zm00001d002359_P001 Maize plasma membrane 57.87 59.03
EES12835 Sorghum cytosol, nucleus, plasma membrane 57.87 58.69
TraesCS2D01G425100.1 Wheat cytosol, peroxisome, plasma membrane 57.64 58.18
TraesCS2B01G447400.1 Wheat cytosol, peroxisome, plasma membrane 57.52 58.06
Os04t0610700-01 Rice plasma membrane 57.99 57.79
HORVU2Hr1G099810.3 Barley vacuole 57.18 57.64
TraesCS2A01G427000.1 Wheat peroxisome 57.64 56.78
CDY54954 Canola cytosol, peroxisome, plasma membrane 52.89 50.83
CDY24518 Canola cytosol, peroxisome, plasma membrane 52.66 47.64
CDX84264 Canola cytosol, peroxisome, plasma membrane 38.43 45.6
CDY27164 Canola cytosol, peroxisome, plasma membrane 39.7 45.31
CDY12441 Canola plasma membrane 40.86 44.46
CDY31662 Canola cytosol, peroxisome, plasma membrane 40.16 44.09
CDY01623 Canola cytosol, peroxisome, plasma membrane 38.66 41.85
CDY51891 Canola cytosol, peroxisome, plasma membrane 38.08 41.65
CDX98647 Canola cytosol, peroxisome, plasma membrane 38.89 41.58
CDY57844 Canola plasma membrane 33.56 41.43
CDY53008 Canola cytosol, peroxisome, plasma membrane 38.43 41.29
CDY64551 Canola cytosol, peroxisome, plasma membrane 38.54 41.21
CDX67610 Canola cytosol, peroxisome, plasma membrane 35.53 41.1
CDY07520 Canola cytosol, peroxisome, plasma membrane 36.92 40.69
CDX84861 Canola plasma membrane 33.45 40.65
CDX78964 Canola cytosol, peroxisome, plasma membrane 38.19 40.64
CDY03755 Canola plasma membrane 31.25 40.6
CDY24033 Canola plasma membrane 33.22 40.42
CDX98648 Canola cytosol 37.73 40.25
CDY10706 Canola plasma membrane 33.22 40.2
CDY02026 Canola plasma membrane 33.1 40.17
CDY01618 Canola cytosol, peroxisome, plasma membrane 32.87 40.06
CDY57658 Canola plasma membrane 32.64 40.0
CDY65345 Canola plasma membrane 36.69 39.92
CDY28663 Canola plasma membrane 34.95 39.22
CDY44124 Canola plasma membrane 35.3 39.0
CDY43004 Canola plasma membrane 34.61 38.48
CDY03756 Canola cytosol 3.01 38.24
CDX93172 Canola cytosol, golgi, plasma membrane 34.14 37.97
CDY06982 Canola plasma membrane 33.91 37.76
CDY11599 Canola plasma membrane 34.14 37.58
CDY65138 Canola cytosol 3.24 27.18
CDY23894 Canola cytosol, golgi, plasma membrane 34.61 23.47
CDX85579 Canola plasma membrane 36.23 21.86
CDX91017 Canola plasma membrane 36.69 20.77
Protein Annotations
EnsemblPlants:CDX78358EnsemblPlantsGene:GSBRNA2T00129723001GO:A0A078CT86GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0009987GO:GO:0015079GO:GO:0016020GO:GO:0071805
InterPro:K+_transporterPANTHER:PTHR30540PANTHER:PTHR30540:SF8PFAM:PF02705ProteinID:CDX78358ProteinID:CDX78358.1
SEG:segTIGRFAMs:TIGR00794TMHMM:TMhelixUniParc:UPI0004EE4349MapMan:24.2.3.11:
Description
BnaA03g02700D
Coordinates
chrLK031815:+:369413..373218
Molecular Weight (calculated)
96230.1 Da
IEP (calculated)
5.146
GRAVY (calculated)
0.268
Length
864 amino acids
Sequence
(BLAST)
001: MAEESSFDGS EKEEIASSGN GFGDLASMDS IESRWVTQDE DDDSVNGADD DDDDDDDEFY GTGLESEDEE VSEHRLLIRT GRRVDSFDVE ALEVPGASRI
101: DYEDLTVGRR VLLAFQTLGV VFGDVGTSPL YTFSVMFSKS PVKEKEDVIG ALSLVLYTLL LIPLIKYVLV VLWANDDGEG GTFALYSLIS RHAKISLIPN
201: QLRSDTRISS FRLKVPCPEL ERSLNLKEKL ENSLVLKKML LVLVLAGTAM VIADGVVTPA MSVMSAVGGL KVGVDAVEQD QVVMISVAFL VILFSLQKYG
301: TSKMGLVVGP ALLLWFCCLA GIGIHNLLKY DRSVYRAFNP IHIYYFFQRN SINAWYALGG CILCATGSEA LFADLCYFSV RSVQLTFVCL VLPCLMLGYM
401: GQAAYLMENH ADASQAFFSS VPGAAFWPVL FIANVAALIA SRTMTTATFS CIKQSTALGC FPRLKIIHTS RKFMGQIYIP VLNWFLLAVC LVVVCSISSI
501: NEIGNAYGMA ELGVMMTTTI LVTLIMLLIW QINIVVVTAF LIVFLGMELI FFSSVIASVG DGSWIILVFA VIMFGIMYVW NYGSKIRYET EVEQKMSMDL
601: MRELGSNLGT IRAPGIGLLY NELVKGVPAI FGHFLTTLPA IHSMVIFVCI KYVPVPVVPQ NERFLFRRVC TKSYHLFRCI ARYGYKDVRK ENHQVFEQLL
701: IESLEKFIRR EAQERSLESD GRNDSDSEED FSGSTLVMGP NGSMYSMGVP LLSEYRDLNK PITELNSSSN HTSHHPFDTS SESSVSEAEQ SLERELSFIH
801: KAKEIGVVYL LGHGDIRARK DSWFVKKLVI NYFYAFLRKN CRRGTANLSV PQSHLMKVDM TYMV
Best Arabidopsis Sequence Match ( AT5G09400.1 )
(BLAST)
001: MAEESSMEGS EKEEIDSSGG GFGDMASMDS IESRWVIQDD DDSEIGVDDD NDGFDGTGLE SDEDEIPEHR LIRTGPRVDS FDVEALEVPG APRNDYEDLT
101: VGRKVLLAFQ TLGVVFGDVG TSPLYTFSVM FSKSPVQEKE DVIGALSLVL YTLLLVPLIK YVLVVLWAND DGEGGTFALY SLISRHAKIS LIPNQLRSDT
201: RISSFRLKVP CPELERSLKL KEKLENSLIL KKILLVLVLA GTSMVIADGV VTPAMSVMSA VGGLKVGVDV VEQDQVVMIS VAFLVILFSL QKYGTSKMGL
301: VVGPALLIWF CSLAGIGIYN LIKYDSSVYR AFNPVHIYYF FKRNSINAWY ALGGCILCAT GSEALFADLC YFSVRSVQLT FVCLVLPCLM LGYMGQAAYL
401: MENHADASQA FFSSVPGSAF WPVLFIANIA ALIASRTMTT ATFSCIKQST ALGCFPRLKI IHTSRKFMGQ IYIPVLNWFL LAVCLVVVCS ISSIDEIGNA
501: YGMAELGVMM TTTILVTLIM LLIWQINIVI VIAFLVVFLG VELVFFSSVI ASVGDGSWII LVFAVIMFGI MYIWNYGSKL RYETEVEQKL SMDLMRELGC
601: NLGTIRAPGI GLLYNELVKG VPAIFGHFLT TLPAIHSMVI FVCIKYVPVP VVPQNERFLF RRVCTKSYHL FRCIARYGYK DARKETHQAF EQLLIESLEK
701: FIRREAQERS LESDGNDDSD SEEDFPGSRV VIGPNGSMYS MGVPLLSEYR DLNKPIMEMN TSSDHTNHHP FDTSSDSSVS EAEQSLEREL SFIHKAKESG
801: VVYLLGHGDI RARKDSWFIK KLVINYFYTF LRKNCRRGIA NLSVPQSHLM QVGMTYMV
Arabidopsis Description
POT7Potassium transporter 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9FY75]
SUBAcon: [plasma membrane,nucleus,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.