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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, nucleus, cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 1
  • mitochondrion 1
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, nucleus, plasma membrane
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra011451.1-P Field mustard cytosol, nucleus, plasma membrane 99.53 99.53
CDX68987 Canola cytosol, nucleus, plasma membrane 97.78 98.47
AT4G33530.1 Thale cress cytosol, nucleus, plasma membrane 90.42 90.53
PGSC0003DMT400042977 Potato cytosol, golgi, plastid 23.48 75.85
KRH10537 Soybean nucleus 73.72 75.03
VIT_12s0142g00170.t01 Wine grape extracellular 52.92 74.75
KRH43903 Soybean nucleus 73.25 74.47
KRH42159 Soybean cytosol, peroxisome, plasma membrane 73.01 73.79
KRH58275 Soybean cytosol, nucleus, plasma membrane 72.9 73.76
Solyc10g047270.1.1 Tomato cytosol, peroxisome, plasma membrane 72.66 73.09
PGSC0003DMT400032781 Potato cytosol, peroxisome, plasma membrane 72.2 72.79
GSMUA_Achr8P15870_001 Banana cytosol, peroxisome, plasma membrane 59.58 72.34
CDX78358 Canola cytosol, nucleus, plasma membrane 72.78 72.11
CDX81125 Canola cytosol, nucleus, plasma membrane 72.78 72.11
Solyc01g105150.2.1 Tomato cytosol, peroxisome, plasma membrane 71.85 71.43
GSMUA_Achr9P11540_001 Banana cytosol, nucleus, plasma membrane 68.46 70.94
Os07t0509200-01 Rice plasma membrane 34.46 67.97
TraesCS2B01G249100.1 Wheat plasma membrane 66.24 66.47
EER99435 Sorghum plasma membrane 65.42 66.43
TraesCS2D01G231500.1 Wheat plasma membrane 66.0 66.24
TraesCS2A01G225600.1 Wheat plasma membrane 65.89 66.12
HORVU2Hr1G047550.1 Barley plasma membrane 64.6 62.7
Zm00001d021592_P001 Maize plasma membrane 62.5 60.59
Zm00001d002359_P001 Maize plasma membrane 57.83 58.44
EES12835 Sorghum cytosol, nucleus, plasma membrane 56.89 57.16
Os04t0610700-01 Rice plasma membrane 57.36 56.63
TraesCS2D01G425100.1 Wheat cytosol, peroxisome, plasma membrane 55.72 55.72
TraesCS2B01G447400.1 Wheat cytosol, peroxisome, plasma membrane 55.61 55.61
HORVU2Hr1G099810.3 Barley vacuole 55.61 55.54
TraesCS2A01G427000.1 Wheat peroxisome 55.72 54.39
CDY54954 Canola cytosol, peroxisome, plasma membrane 51.75 49.28
CDY24518 Canola cytosol, peroxisome, plasma membrane 51.75 46.39
CDY27164 Canola cytosol, peroxisome, plasma membrane 40.65 45.97
CDX84264 Canola cytosol, peroxisome, plasma membrane 38.67 45.47
CDY12441 Canola plasma membrane 41.24 44.46
CDY31662 Canola cytosol, peroxisome, plasma membrane 39.84 43.33
CDY01623 Canola cytosol, peroxisome, plasma membrane 39.6 42.48
CDY51891 Canola cytosol, peroxisome, plasma membrane 39.02 42.28
CDY64551 Canola cytosol, peroxisome, plasma membrane 39.6 41.96
CDY53008 Canola cytosol, peroxisome, plasma membrane 39.25 41.79
CDX98647 Canola cytosol, peroxisome, plasma membrane 39.37 41.71
CDX98648 Canola cytosol 39.25 41.48
CDY57844 Canola plasma membrane 33.88 41.43
CDX78964 Canola cytosol, peroxisome, plasma membrane 39.25 41.38
CDX84861 Canola plasma membrane 33.88 40.79
CDY01618 Canola cytosol, peroxisome, plasma membrane 33.76 40.76
CDY10706 Canola plasma membrane 34.0 40.76
CDY02026 Canola plasma membrane 33.88 40.73
CDY24033 Canola plasma membrane 33.64 40.56
CDY65345 Canola plasma membrane 37.5 40.43
CDX67610 Canola cytosol, peroxisome, plasma membrane 35.05 40.16
CDY03755 Canola plasma membrane 31.07 40.0
CDY28663 Canola plasma membrane 35.86 39.87
CDY03756 Canola cytosol 3.15 39.71
CDY07520 Canola cytosol, peroxisome, plasma membrane 36.1 39.41
CDY57658 Canola plasma membrane 32.24 39.15
CDY44124 Canola plasma membrane 35.28 38.62
CDY43004 Canola plasma membrane 34.7 38.22
CDX93172 Canola cytosol, golgi, plasma membrane 34.35 37.84
CDY11599 Canola plasma membrane 34.58 37.71
CDY06982 Canola plasma membrane 34.11 37.63
CDY65138 Canola cytosol 3.15 26.21
CDY23894 Canola cytosol, golgi, plasma membrane 35.05 23.55
CDX85579 Canola plasma membrane 35.98 21.51
CDX91017 Canola plasma membrane 36.45 20.45
Protein Annotations
EnsemblPlants:CDX75364EnsemblPlantsGene:GSBRNA2T00121245001GO:A0A078CGW8GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0009987GO:GO:0015079GO:GO:0016020GO:GO:0071805
InterPro:K+_transporterPANTHER:PTHR30540PANTHER:PTHR30540:SF8PFAM:PF02705ProteinID:CDX75364ProteinID:CDX75364.1
SEG:segTIGRFAMs:TIGR00794TMHMM:TMhelixUniParc:UPI0004EE0637MapMan:24.2.3.11:
Description
BnaA01g03380D
Coordinates
chrLK031804:-:810871..814500
Molecular Weight (calculated)
94661.2 Da
IEP (calculated)
5.050
GRAVY (calculated)
0.329
Length
856 amino acids
Sequence
(BLAST)
001: MFSVEEGSSG GDGGSEMDDE ITGDGSTSSL SRWVFDEKND YDEDYDDDDD GYDERQHGDV DSDEEDDNVE QRLIRTSPAV DSFDVDALEI PGAQKNDIED
101: SSLGRKLVLA LQTLGVVFGD IGTSPLYTFS VMFNRSPIND KEDVIGALSL VIYTLILLPL VKYVFFVLWA NDDGEGGTFA LYSLICRHAN VSLIPNQLPS
201: DARISGFGLK VPSPELERSL IIKEKLEASM LLKKLLLILV LAGTAMVIAD AVVTPAMSVM SAIGGLKVGV GAIKQDQVLV ISVSFLVILF SVQKYGASKL
301: GLALGPALLL WFFCLAGIGI YNLAKYDSSV FRAFNPAHIY FFFKRNSVNA WYALGGCVLC ATGSEAMFAD LSYFSVHSIQ LTFTLLVLPC LLLGYLGQAA
401: YLSENFSHAE NAFFSSVPSF IFWPVFLISN IAALIASRAM TTATFTCIKQ SIALGCFPRL KIIHTSKKFI GQIYIPVLNW FLLVVCLIVI CSISNIFMIG
501: NAYGIAELGI MMTTTILVTL IMLLIWQTNI IVVCLFAIVA LGVELMFFSS VLSSVADGSW IILVFAAIMF FIMYVWNYGS KLKYETEVQK KLPMDLLREL
601: GSNLGTIRAP GIGLLYNELA KGVPAIFGHF LTTLPAIHSM VIFVCIKYVP VPSVPQSERF LFRGVCPRSY HLFRCVARYG YKDVRKENHQ AFEQILIESL
701: EKFIRKEAQE RSLESDGDNN TDSEDDTTLS RVLIAPNGSV YSLGVPLLAE HLESYMRPSE KRSSMDFGAG PSNETPALDA EQSLEKELSF IHKAKESGVV
801: YLLGHGDIRA TKDSWFLKKL VINYMYAFLR KNSRRGITNL SVPHSHLMQV GMTYMV
Best Arabidopsis Sequence Match ( AT4G33530.1 )
(BLAST)
001: MFHVEEESSG GDGSEIDEEF GGDDSTTSLS RWVFDEKDDY EVNEDYDDDG YDEHNHPEMD SDEEDDNVEQ RLIRTSPAVD SFDVDALEIP GTQKNEIEDT
101: GIGKKLILAL QTLGVVFGDI GTSPLYTFTV MFRRSPINDK EDIIGALSLV IYTLILIPLV KYVHFVLWAN DDGEGGTFAL YSLICRHANV SLIPNQLPSD
201: ARISGFGLKV PSPELERSLI IKERLEASMA LKKLLLILVL AGTAMVIADA VVTPAMSVMS AIGGLKVGVG VIEQDQVVVI SVSFLVILFS VQKYGTSKLG
301: LVLGPALLLW FFCLAGIGIY NLVKYDSSVF KAFNPAYIYF FFKRNSVNAW YALGGCVLCA TGSEAMFADL SYFSVHSIQL TFILLVLPCL LLGYLGQAAY
401: LSENFSAAGD AFFSSVPSSL FWPVFLISNV AALIASRAMT TATFTCIKQS IALGCFPRLK IIHTSKKFIG QIYIPVLNWS LLVVCLIVVC STSNIFAIGN
501: AYGIAELGIM MTTTILVTLI MLLIWQTNII VVSMFAIVSL IVELVFFSSV CSSVADGSWI ILVFATIMFL IMFVWNYGSK LKYETEVQKK LPMDLLRELG
601: SNLGTIRAPG IGLLYNELAK GVPAIFGHFL TTLPAIHSMV IFVCIKYVPV PSVPQTERFL FRRVCPRSYH LFRCVARYGY KDVRKESHQA FEQILIESLE
701: KFIRKEAQER ALESDGDHND TDSEDDTTLS RVLIAPNGSV YSLGVPLLAE HMNSSNKRPM ERRKASIDFG AGPSSALDVE QSLEKELSFI HKAKESGVVY
801: LLGHGDIRAT KDSWFLKKLV INYLYAFLRK NSRRGITNLS VPHTHLMQVG MTYMV
Arabidopsis Description
POT13Potassium transporter 13 [Source:UniProtKB/Swiss-Prot;Acc:Q8LPL8]
SUBAcon: [plasma membrane,nucleus,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.