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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, golgi, cytosol

Predictor Summary:
  • plastid 1
  • mitochondrion 1
  • golgi 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, golgi, plasma membrane
Any Predictor:cytosol, golgi, plasma membrane, plastid
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:golgi
PProwler:secretory
WoLF PSORT:cytosol
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY06982 Canola plasma membrane 99.23 99.36
VIT_13s0067g02570.t01 Wine grape plasma membrane 81.72 80.08
PGSC0003DMT400062466 Potato plasma membrane 80.18 78.86
KRH53743 Soybean plasma membrane 79.54 78.23
KRH64195 Soybean plasma membrane 79.15 77.85
TraesCS4A01G136300.1 Wheat plasma membrane 45.95 77.27
GSMUA_Achr8P01760_001 Banana plasma membrane 72.07 74.27
GSMUA_Achr11P... Banana plasma membrane 66.8 71.88
TraesCS4D01G170900.1 Wheat plasma membrane 71.69 71.41
TraesCS4B01G168400.1 Wheat plasma membrane 71.43 71.15
Os07t0679000-01 Rice plasma membrane 71.56 70.56
Zm00001d029072_P003 Maize plasma membrane 71.56 70.03
EER94895 Sorghum plasma membrane 71.81 69.32
EER99908 Sorghum plasma membrane 70.53 69.19
TraesCS2D01G106600.1 Wheat plasma membrane 69.11 68.85
TraesCS2A01G107100.1 Wheat plasma membrane 69.24 68.8
TraesCS2B01G123700.1 Wheat plasma membrane 69.11 68.67
CDY57844 Canola plasma membrane 59.97 66.57
HORVU2Hr1G018190.12 Barley plasma membrane 69.11 66.13
CDY03755 Canola plasma membrane 56.11 65.56
Zm00001d022449_P002 Maize cytosol, peroxisome, plasma membrane 70.66 65.44
Solyc06g050170.2.1 Tomato plasma membrane 79.92 63.11
CDY43004 Canola plasma membrane 61.78 61.78
CDY11599 Canola plasma membrane 61.78 61.15
Os03t0337500-00 Rice plasma membrane 66.92 59.98
CDY23894 Canola cytosol, golgi, plasma membrane 94.47 57.61
CDY02026 Canola plasma membrane 51.87 56.6
CDX84861 Canola plasma membrane 51.74 56.54
CDY24033 Canola plasma membrane 51.61 56.48
CDY10706 Canola plasma membrane 51.74 56.3
CDY03756 Canola cytosol 4.76 54.41
CDY28663 Canola plasma membrane 51.09 51.56
CDY44124 Canola plasma membrane 47.49 47.19
CDY57658 Canola plasma membrane 42.73 47.09
CDX84264 Canola cytosol, peroxisome, plasma membrane 43.5 46.43
CDY27164 Canola cytosol, peroxisome, plasma membrane 44.02 45.18
CDY31662 Canola cytosol, peroxisome, plasma membrane 44.4 43.84
CDY12441 Canola plasma membrane 44.53 43.58
CDY51891 Canola cytosol, peroxisome, plasma membrane 44.27 43.54
CDY53008 Canola cytosol, peroxisome, plasma membrane 44.14 42.66
CDY64551 Canola cytosol, peroxisome, plasma membrane 44.14 42.45
CDY01623 Canola cytosol, peroxisome, plasma membrane 43.5 42.36
CDX98648 Canola cytosol 44.14 42.35
CDX98647 Canola cytosol, peroxisome, plasma membrane 43.89 42.2
CDX78964 Canola cytosol, peroxisome, plasma membrane 44.02 42.12
CDY65345 Canola plasma membrane 42.34 41.44
CDX67610 Canola cytosol, peroxisome, plasma membrane 39.77 41.37
CDY01618 Canola cytosol, peroxisome, plasma membrane 37.71 41.33
CDY07520 Canola cytosol, peroxisome, plasma membrane 40.54 40.18
CDY54954 Canola cytosol, peroxisome, plasma membrane 43.11 37.26
CDY24518 Canola cytosol, peroxisome, plasma membrane 43.24 35.18
CDX68987 Canola cytosol, nucleus, plasma membrane 37.97 34.71
CDX75364 Canola cytosol, nucleus, plasma membrane 37.84 34.35
CDX81125 Canola cytosol, nucleus, plasma membrane 37.97 34.14
CDX78358 Canola cytosol, nucleus, plasma membrane 37.97 34.14
CDX85579 Canola plasma membrane 60.75 32.96
CDX91017 Canola plasma membrane 62.93 32.04
CDY65138 Canola cytosol 3.35 25.24
Protein Annotations
MapMan:24.2.3.11GO:A0A078DW70EnsemblPlants:CDX93172ProteinID:CDX93172ProteinID:CDX93172.1ncoils:Coil
GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0009987
GO:GO:0015079GO:GO:0016020GO:GO:0071805EnsemblPlantsGene:GSBRNA2T00155103001InterPro:K+_transporterPFAM:PF02705
PANTHER:PTHR30540PANTHER:PTHR30540:SF6TIGRFAMs:TIGR00794TMHMM:TMhelixUniParc:UPI0004EE7E47SEG:seg
Description
BnaC04g47240D
Coordinates
chrLK031875:-:46038..49935
Molecular Weight (calculated)
87162.9 Da
IEP (calculated)
7.267
GRAVY (calculated)
0.342
Length
777 amino acids
Sequence
(BLAST)
001: MDLNFGKCCG SKKKESWRSV MLLAYQSLGV VYGDLSISPL YVFKSTFAED IRHSETNEEI FGVLSFVFWT LTLVPLLKYV FIVLRADDNG EGGTFALYSL
101: ICRHVKVSLL PNRQVADEAL STYKLEHPPE KNHDSCVKRY LEKHKWLHTA LLLLVLLGTC MVIGDGLLTP AISVFSAVSG LEMNMSKEHH QYAVIPITCF
201: ILICLFALQH FGTHRVGFVF APIVLTWLLT ISGIGLYNII QWNPHVYKAL SPKYMFMFLR KTRVSGWMSL GGILLCITGA EAMFADLGHF NYAAIQATLI
301: LAYMGQAAYL SQHHNSAHAI GFYISVPKCV HWPVLMIAIL ASVVGSQAII SGTFSIINQS QSLGCFPRVK VIHTSDKIHG QIYIPEINWM LMVLCIAVTI
401: GFRDVKHLGN ASGLAVMAVM LVTTCLMSLV IVLCWHKPPI LALLFLLFFG SIELLYFSAS LTKFREGAWL PILLSLFFMI IMFVWHYTTI KKYEFDLQNK
501: VSLEWLLALG PSLGISRVPG IGLVFTDLTS GIPANFSRFV TNLPAFHRVL VFVCVKSVPV PFVPAAERYL VGRVGPVDHR SYRCIVRYGY RDVHQDVDSF
601: ETELVTKLGD FIRYDWHRRT TQEDDTVRSN EDSSESRLAV IGTVAYEIEE NLQPESVSIG FTTVESMEDV IEMAAPPPTT TVKRVRFAVE EEDRYEEDEE
701: AEAELRSELR DLVAAQEAGT AFILGHSHVK AKQGSSVMKR LAVNFGYNFL RRNCRGPDVA LKVPPVSLLE VGMVYVV
Best Arabidopsis Sequence Match ( AT2G40540.3 )
(BLAST)
001: MDLNLGKCCG SRSSKKESWR SVLLLAYQSL GVVYGDLSIS PLYVFKSTFA EDIQHSETNE EIYGVMSFVF WTLTLVPLLK YVFIVLRADD NGEGGTFALY
101: SLICRHVKVS LLPNRQVSDE ALSTYKLEHP PEKNHDSCVK RYLEKHKWLH TALLLLVLLG TCMVIGDGLL TPAISVFSAV SGLELNMSKE HHQYAVIPIT
201: CFILVCLFSL QHFGTHRVGF VFAPIVLTWL LCISGIGLYN IIQWNPHIYK ALSPTYMFMF LRKTRVSGWM SLGGILLCIT GAEAMFADLG HFNYAAIQIA
301: FTFLVYPALI LAYMGQAAYL SRHHHSAHAI GFYVSVPKCL HWPVLAVAIL ASVVGSQAII SGTFSIINQS QSLGCFPRVK VIHTSDKMHG QIYIPEINWM
401: LMILCIAVTI GFRDVKHLGN ASGLAVMAVM LVTTCLTSLV IVLCWHKPPI LALAFLLFFG SIELLYFSAS LTKFREGAWL PILLSLIFMI IMFVWHYTTI
501: KKYEFDLQNK VSLEWLLALG PSLGISRVPG IGLVFTDLTS GIPANFSRFV TNLPAFHRVL VFVCVKSVPV PFVPPAERYL VGRVGPVDHR SYRCIVRYGY
601: RDVHQDVDSF ETELVSKLAD FIRYDWHKRT QQEDDNARSV QSNESSSESR LAVIGTVAYE IEDNLQPESV SIGFSTVESM EDVIQMAEPA PTATIRRVRF
701: AVEENSYEDE GSTSSAEADA ELRSELRDLL AAQEAGTAFI LGHSHVKAKQ GSSVMKRLAV NFGYNFLRRN CRGPDVALKV PPVSLLEVGM VYVV
Arabidopsis Description
POT2Potassium transporter [Source:UniProtKB/TrEMBL;Acc:A0A178VTZ5]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.