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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:
  • nucleus 1
  • cytosol 1
  • mitochondrion 1
  • plasma membrane 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plasma membrane
Any Predictor:cytosol, nucleus, peroxisome, plasma membrane
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra013433.1-P Field mustard cytosol, peroxisome, plasma membrane 89.29 99.72
CDY51891 Canola cytosol, peroxisome, plasma membrane 95.81 98.48
CDY64551 Canola cytosol, peroxisome, plasma membrane 88.79 89.23
CDY53008 Canola cytosol, peroxisome, plasma membrane 87.81 88.68
AT4G19960.3 Thale cress cytosol, peroxisome, plasma membrane 88.92 86.67
CDY01618 Canola cytosol, peroxisome, plasma membrane 73.89 84.63
CDY01623 Canola cytosol, peroxisome, plasma membrane 82.02 83.46
CDX98647 Canola cytosol, peroxisome, plasma membrane 82.64 83.04
CDX98648 Canola cytosol 82.64 82.84
CDY65345 Canola plasma membrane 75.49 77.2
CDX84264 Canola cytosol, peroxisome, plasma membrane 65.27 72.8
VIT_01s0011g01510.t01 Wine grape plasma membrane 70.2 72.15
KRH12204 Soybean plasma membrane 65.52 71.03
PGSC0003DMT400046034 Potato plasma membrane 68.23 70.66
GSMUA_Achr2P02640_001 Banana plasma membrane 49.01 70.44
Solyc02g031840.2.1 Tomato plasma membrane 67.98 70.41
CDY27164 Canola cytosol, peroxisome, plasma membrane 65.52 70.28
KRH37223 Soybean plasma membrane 68.1 70.0
KRH58500 Soybean plasma membrane 68.1 69.91
Solyc02g068590.2.1 Tomato peroxisome, plasma membrane, vacuole 67.98 69.61
CDY31662 Canola cytosol, peroxisome, plasma membrane 67.36 69.5
PGSC0003DMT400027038 Potato peroxisome, plasma membrane, vacuole 67.73 69.44
GSMUA_Achr5P00220_001 Banana plasma membrane 65.15 68.88
GSMUA_Achr11P... Banana mitochondrion, plasma membrane 65.15 67.82
CDY12441 Canola plasma membrane 66.26 67.76
KRH42381 Soybean plasma membrane 68.23 67.56
CDY65138 Canola cytosol 8.5 66.99
Os04t0613900-01 Rice plasma membrane 65.15 66.88
Os08t0206400-01 Rice cytosol, golgi, nucleus 10.84 66.67
TraesCS5A01G366100.1 Wheat peroxisome 64.29 66.5
TraesCS5B01G368500.1 Wheat peroxisome 64.16 66.37
TraesCS5D01G375700.1 Wheat peroxisome 63.79 65.99
TraesCS2B01G441100.1 Wheat plasma membrane 64.16 65.78
TraesCS2D01G419000.2 Wheat plasma membrane 64.16 65.78
HORVU2Hr1G098940.4 Barley plasma membrane 64.04 65.66
TraesCS2A01G422600.1 Wheat plasma membrane 64.04 65.66
OQU80069 Sorghum plasma membrane 63.67 65.44
EER98483 Sorghum plasma membrane 63.3 65.31
EES12852 Sorghum plasma membrane 64.66 65.22
TraesCS1A01G047200.2 Wheat plasma membrane 63.3 65.06
TraesCS1B01G061200.3 Wheat plasma membrane 62.68 65.01
TraesCS1D01G048200.2 Wheat plasma membrane 63.05 64.81
HORVU5Hr1G090010.6 Barley plasma membrane 64.04 64.52
Zm00001d024300_P003 Maize plasma membrane 63.55 64.5
Zm00001d026289_P004 Maize plasma membrane 64.53 64.37
Os09t0563200-01 Rice plasma membrane 62.68 64.19
GSMUA_Achr4P33190_001 Banana plasma membrane 58.74 63.6
GSMUA_Achr8P33490_001 Banana plasma membrane 61.33 63.36
HORVU1Hr1G009100.7 Barley plasma membrane 62.93 63.32
Zm00001d019631_P003 Maize plasma membrane 63.3 63.3
Zm00001d002333_P003 Maize plasma membrane 64.16 60.65
CDY57844 Canola plasma membrane 41.75 48.43
CDY03755 Canola plasma membrane 39.16 47.82
CDY02026 Canola plasma membrane 41.26 47.05
CDY10706 Canola plasma membrane 41.26 46.92
CDX84861 Canola plasma membrane 41.01 46.84
CDY24033 Canola plasma membrane 40.76 46.62
CDY28663 Canola plasma membrane 43.23 45.58
CDY43004 Canola plasma membrane 42.61 44.53
CDY06982 Canola plasma membrane 42.12 44.07
CDX93172 Canola cytosol, golgi, plasma membrane 42.12 44.02
CDY11599 Canola plasma membrane 42.24 43.69
CDX67610 Canola cytosol, peroxisome, plasma membrane 38.05 41.37
CDY07520 Canola cytosol, peroxisome, plasma membrane 39.53 40.94
CDY57658 Canola plasma membrane 35.1 40.43
CDY44124 Canola plasma membrane 38.42 39.9
CDX68987 Canola cytosol, nucleus, plasma membrane 41.63 39.76
CDX75364 Canola cytosol, nucleus, plasma membrane 41.38 39.25
CDX81125 Canola cytosol, nucleus, plasma membrane 40.76 38.31
CDX78358 Canola cytosol, nucleus, plasma membrane 40.64 38.19
CDY54954 Canola cytosol, peroxisome, plasma membrane 41.87 37.82
CDY03756 Canola cytosol 3.08 36.76
CDY24518 Canola cytosol, peroxisome, plasma membrane 41.75 35.5
CDY23894 Canola cytosol, golgi, plasma membrane 42.12 26.84
CDX85579 Canola plasma membrane 43.47 24.65
CDX91017 Canola plasma membrane 44.21 23.53
Protein Annotations
EnsemblPlants:CDX78964EnsemblPlantsGene:GSBRNA2T00131470001GO:A0A078CSC4GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0009987GO:GO:0015079GO:GO:0016020GO:GO:0071805
InterPro:K+_transporterPANTHER:PTHR30540PANTHER:PTHR30540:SF76PFAM:PF02705ProteinID:CDX78964ProteinID:CDX78964.1
SEG:segTIGRFAMs:TIGR00794TMHMM:TMhelixUniParc:UPI0004EEBA79MapMan:24.2.3.11:
Description
BnaA01g10310D
Coordinates
chrLK031816:+:1103349..1106586
Molecular Weight (calculated)
90714.8 Da
IEP (calculated)
7.230
GRAVY (calculated)
0.287
Length
812 amino acids
Sequence
(BLAST)
001: MAERVETSVP EGENTIEERH VGAMWELEQK LDQPMDEEAT KLNTTPRDKL SMLMLLRLSF QSLGIVYGDL GTSPLYVFYN TFPDGIEDSE DVIGALSLII
101: YSLLLVPLIK YVFIVCKAND NGQGGTLAIY SLLCRHAKVS LIPNHQRSDE NLTTYSRTLS TEGSFSAKTK KWLEGKHWRK RALLVIVLLG TCMTIGDGIL
201: TPAISVLSAT GGIKVNNPKM SSDIVVVVAI VILIGLFSMQ HYGTDKVGWL FAPIVFIWFL FIGATGIYNI CKHDTSVLKA FSPTYIYLYF KRRGRDGWIS
301: LGGILLSITG TEALYADIAY FPLLAIQLAF TFFVFPCLLL AYCGQAAYLV NNKDHYQDAF YASIPGLVYW PMFIAATGAA IVGSQATISG TYSIVKQAVS
401: HGCFPRVQIV HTSKKFLGQI YCPDINWILM IGCIAVTASF KNQSQIGNAY GTAVVLVMLM TTLLMVLIML LVWRCHWSLV LIFAVLSLVV ELSYFSAVIF
501: KFIEGGWVPL IIAAISLLVM SVWHYATVKK YEFEVHSKVS MSWILGLGPS LGLVRVPGIG LVYTELARGV PHIFSHFITN LPAIHSVVVF VCVKYLPVYT
601: VPEEERFLVK RIGPKTFRMF RCVARYGYKD LHRKDDDFET KLFNKLLSFV HIETMMEPGA NSSTYSSAYS VNQTPDALVH NNNNNNHNSN NNNENNENNN
701: MDMFSSMVDY TVSTLDTIVP VDSPHSRMSF RHSNTIEEEE EDELEFLKTC KESGVVHIMG NTVVKARSGA GLPKKIAIDY VYAFLAKVCR ENSVILHVPH
801: ETLLNVGQVF YV
Best Arabidopsis Sequence Match ( AT4G19960.2 )
(BLAST)
001: MAERVEASSV PEGENTIEER EVGAMWELEQ KLDQPMDEEA NKLNNMYREK GLSMLMLLRL SFQSLGIVYG DLGTSPLYVF YNTFPDGIDD SEDVIGALSL
101: IIYSLLLIPL IKYVFIVCKA NDNGQGGTLA IYSLLCRHAK VKLIPNQHRS DEDLTTYSRT VSAEGSFAAK TKKWLEGKEW RKRALLVVVL LGTCMMIGDG
201: ILTPAISVLS ATGGIKVNNP KMSGDIVVLV AIVILIGLFS MQHYGTDKVG WLFAPIVLIW FLFIGATGMY NICKYDTSVL KAFSPTYIYL YFKRRGRDGW
301: ISLGGILLSI TGTEALYADI AYFPLLAIQL AFTFFVFPCL LLAYCGQAAY LVIHKEHYQD AFYASIPDSV YWPMFIVATG AAIVGSQATI SGTYSIVKQA
401: VAHGCFPRVK IVHTSKKFLG QIYCPDINWI LMLGCIAVTA SFKKQSQIGN AYGTAVVLVM LVTTLLMVLI MLLVWHCHWI LVLIFTFLSF FVELSYFSAV
501: IFKIDEGGWV PLIIAAISLL VMSVWHYATV KKYEFEMHSK VSMSWILGLG PSLGLVRVPG IGLVYTELAS GVPHIFSHFI TNLPAIHSVV VFVCVKYLPV
601: YTVPEEERFL VKRIGPKTFR MFRCVARYGY KDLHKKDDDF ENKLLTKLSS FIRIETMMEP TSNSSTYSST YSVNHTQDST VDLIHNNNNH NHNNNMDMFS
701: SMVDYTVSTL DTIVSAESLH NTVSFSQDNT VEEEETDELE FLKTCKESGV VHIMGNTVVK ARTGSWLPKK IAIDYVYAFL AKICRANSVI LHVPHETLLN
801: VGQVFYV
Arabidopsis Description
KUP9K+ uptake permease 9 [Source:TAIR;Acc:AT4G19960]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.