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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • vacuole 2
  • extracellular 1
  • endoplasmic reticulum 1
  • plasma membrane 3
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, plasma membrane, vacuole
BaCelLo:nucleus
MultiLoc:vacuole
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX70151
CDX98843
CDY04950
CDY52149

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G70300.1 CDX70151 AT5G05410.1 18552202
AT1G70300.1 CDX98843 AT5G05410.1 18552202
AT1G70300.1 CDY04950 AT5G05410.1 18552202
AT1G70300.1 CDY52149 AT5G05410.1 18552202
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY03756 Canola cytosol 8.75 100.0
CDY03755 Canola plasma membrane 83.66 97.74
CDY57844 Canola plasma membrane 85.33 94.71
CDY11599 Canola plasma membrane 93.31 92.36
AT1G70300.1 Thale cress plasma membrane 90.09 89.51
VIT_01s0026g00270.t01 Wine grape plasma membrane 77.99 77.89
GSMUA_Achr9P22670_001 Banana cytosol, peroxisome, plasma membrane 70.4 76.4
GSMUA_Achr7P20040_001 Banana plasma membrane 67.44 76.38
Solyc05g005740.2.1 Tomato cytosol, plasma membrane, vacuole 76.06 75.87
PGSC0003DMT400010525 Potato plasma membrane 75.55 75.35
GSMUA_Achr3P06140_001 Banana plasma membrane 67.95 73.95
KRH74619 Soybean plasma membrane 73.49 72.46
Solyc04g025880.2.1 Tomato plasma membrane 71.81 72.0
KRH45700 Soybean plasma membrane 72.2 71.56
KRG99315 Soybean plasma membrane 71.3 71.03
PGSC0003DMT400035889 Potato plasma membrane 44.66 70.24
KRH69531 Soybean plasma membrane 67.44 70.24
Os02t0730300-01 Rice plasma membrane 67.95 68.57
Zm00001d017925_P004 Maize plasma membrane 67.95 68.31
KXG30825 Sorghum plasma membrane 67.95 68.22
Zm00001d051756_P004 Maize plasma membrane 67.18 67.97
TraesCS6B01G322300.3 Wheat plasma membrane 66.28 67.06
TraesCS7D01G211800.1 Wheat plasma membrane 66.54 67.06
TraesCS7B01G116700.2 Wheat plasma membrane 66.54 67.06
TraesCS6D01G273100.1 Wheat plasma membrane 66.15 66.93
TraesCS6A01G291900.2 Wheat plasma membrane 66.15 66.84
TraesCS7A01G209900.1 Wheat plasma membrane 66.28 66.71
GSMUA_Achr1P09670_001 Banana plasma membrane 58.04 66.42
Zm00001d046679_P002 Maize plasma membrane 70.01 66.18
TraesCS7B01G295600.2 Wheat plasma membrane 70.14 66.06
EER90068 Sorghum peroxisome 69.63 65.98
TraesCS7D01G388900.2 Wheat plasma membrane 70.14 65.9
TraesCS7A01G393600.1 Wheat plasma membrane 70.14 65.74
Os06t0270200-00 Rice plasma membrane 64.86 65.45
HORVU6Hr1G073030.13 Barley plasma membrane, vacuole 66.15 65.23
Zm00001d037305_P001 Maize plasma membrane 64.22 64.89
Os06t0625900-01 Rice vacuole 70.4 64.89
EER89587 Sorghum plasma membrane 64.48 64.81
CDX93172 Canola cytosol, golgi, plasma membrane 61.78 61.78
HORVU7Hr1G092940.2 Barley plastid 70.14 61.72
HORVU7Hr1G042800.11 Barley mitochondrion, plasma membrane 61.9 61.67
CDY06982 Canola plasma membrane 61.52 61.6
Zm00001d036784_P002 Maize plasma membrane 65.89 60.59
CDY02026 Canola plasma membrane 52.51 57.3
CDY10706 Canola plasma membrane 52.51 57.14
CDX84861 Canola plasma membrane 52.25 57.1
CDY24033 Canola plasma membrane 51.99 56.9
CDY28663 Canola plasma membrane 51.48 51.95
HORVU7Hr1G053250.1 Barley cytosol 13.9 51.43
CDY44124 Canola plasma membrane 48.13 47.83
CDX84264 Canola cytosol, peroxisome, plasma membrane 44.79 47.8
CDY57658 Canola plasma membrane 43.11 47.52
CDY27164 Canola cytosol, peroxisome, plasma membrane 45.95 47.16
CDY12441 Canola plasma membrane 46.72 45.72
CDY31662 Canola cytosol, peroxisome, plasma membrane 45.82 45.24
CDY01623 Canola cytosol, peroxisome, plasma membrane 45.3 44.11
CDY51891 Canola cytosol, peroxisome, plasma membrane 44.79 44.05
CDX98647 Canola cytosol, peroxisome, plasma membrane 45.05 43.32
CDY53008 Canola cytosol, peroxisome, plasma membrane 44.14 42.66
CDX78964 Canola cytosol, peroxisome, plasma membrane 44.53 42.61
CDX98648 Canola cytosol 44.27 42.47
CDY64551 Canola cytosol, peroxisome, plasma membrane 44.14 42.45
CDY65345 Canola plasma membrane 42.86 41.94
CDY01618 Canola cytosol, peroxisome, plasma membrane 37.07 40.62
CDX67610 Canola cytosol, peroxisome, plasma membrane 38.22 39.76
CDY07520 Canola cytosol, peroxisome, plasma membrane 39.25 38.9
CDX85579 Canola plasma membrane 71.17 38.62
CDY54954 Canola cytosol, peroxisome, plasma membrane 43.89 37.93
CDY23894 Canola cytosol, golgi, plasma membrane 62.16 37.91
CDX91017 Canola plasma membrane 73.49 37.42
CDY24518 Canola cytosol, peroxisome, plasma membrane 43.89 35.71
CDX68987 Canola cytosol, nucleus, plasma membrane 38.61 35.29
CDX75364 Canola cytosol, nucleus, plasma membrane 38.22 34.7
CDX81125 Canola cytosol, nucleus, plasma membrane 38.48 34.61
CDX78358 Canola cytosol, nucleus, plasma membrane 38.48 34.61
CDY65138 Canola cytosol 3.22 24.27
Protein Annotations
MapMan:24.2.3.11GO:A0A078I0A3UniProt:A0A078I0A3EnsemblPlants:CDY43004ProteinID:CDY43004ProteinID:CDY43004.1
GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0006811GO:GO:0006813
GO:GO:0008150GO:GO:0009987GO:GO:0015079GO:GO:0016020GO:GO:0016021GO:GO:0071805
EnsemblPlantsGene:GSBRNA2T00075798001InterPro:K+_transporterPFAM:PF02705PANTHER:PTHR30540PANTHER:PTHR30540:SF10TIGRFAMs:TIGR00794
TMHMM:TMhelixUniParc:UPI0004EE3E6CSEG:seg:::
Description
BnaC02g19780DPotassium transporter [Source:UniProtKB/TrEMBL;Acc:A0A078I0A3]
Coordinates
chrLK032541:-:231519..235681
Molecular Weight (calculated)
86673.5 Da
IEP (calculated)
8.485
GRAVY (calculated)
0.325
Length
777 amino acids
Sequence
(BLAST)
001: MDIESRSYQN IVKKESWRTV LTLAYQSLGV VYGDLSTSPL YVYKSTFAED IHHTESNDEI FGVLSFIFWT ITLVPLFKYV FIVLRADDNG EGGTFALYSL
101: LCRHARVNSL PSCQLADQQL IEYNGSSSEM TAQSGFAARL KCTLEKHRVL QKVLLVLALI GTCMVIGDGV LTPAISVFSA VSGVELSTAK EHHKYIEVPA
201: ACIILIGLFA LQHYGTHRVG FLFAPVILLW LMCISAIGVY NIIHWNPHVY QALSPYYMYK FLKKTQSRGW MSLGGILLCI TGSEAMFADL GHFSQLSIQI
301: AFTSLVYPSL ILAYMGQAAY LSQHHAIASE YNIGFYVSVP EKLRWPVLVI AILAAVVGSQ AIITGTFSII KQCSALGCFP KVKIVHTSSK IHGQIYIPEI
401: NWILMILCLA VTIGFRDTRR LGNASGLAVI TVMLVTTCLM SLVIVLCWHK NIFFAIAFVV FFGTIESLYF SASLIKFLEG AWVPIALSLC FLAAMCTWHY
501: GTLKRYEFDV QNKVSVNWLL SLGQTLGIKR VRGIGLIHTE LVSGVPAIFS HFVTNLPAFH QVLVFLCVKS VPVPHVRPEE RFLVGRVGPK QFRMYRCIVR
601: YGYRDVHKDD IEFEGDLVCS IAEFVRSEAE TAVVETNGEG ERMSVVGTCS TYMQGIEDLD GSDVDEMDKP GPSEILSPKL KKKKSKVKKK VRFVVPETPK
701: IEKETREELM ELTEAREGGV AYIMGNAYMR AKHGSGLVKR LAINVGYEFL RRNTRGPRTA LTSPYASTLE VGMIYHV
Best Arabidopsis Sequence Match ( AT1G70300.1 )
(BLAST)
001: MEIESGSYQN AKKESWRTVL TLAYQSLGVV YGDLSISPLY VYKSTFAEDI HHSESNEEIF GVLSFIFWTI TLVPLLKYVF IVLRADDNGE GGTFALYSLL
101: CRHARVNSLP SCQLADEQLI EYKTDSIGSS SMPQSGFAAS LKSTLEKHGV LQKILLVLAL IGTCMVIGDG VLTPAISVFS AVSGVELSMS KEHHKYIELP
201: AACVILIGLF ALQHYGTHRV GFLFAPVILL WLMCISAIGV YNIFHWNPHV YQALSPYYMY KFLKKTQSRG WMSLGGILLC ITGSEAMFAD LGHFSQLSIK
301: IAFTSLVYPS LILAYMGQAA YLSQHHIIES EYNIGFYVSV PERLRWPVLV IAILAAVVGS QAIITGTFSI IKQCSALGCF PKVKIVHTSS KIHGQIYIPE
401: INWILMVLCL AVTIGFRDTK RLGNASGLAV ITVMLVTTCL MSLVIVLCWH KSVIFAIVFV VFFGTIESLY FSASLIKFLE GAWVPIALAF CFLLAMCTWH
501: YGTLKRYEYD VQNKVSVNWL LSLSQTLGIA RVRGLGLIHT ELVSGVPAIF SHFVTNLPAF HQVLVFLCVK SVPVPHVRPQ ERFLVGRIGP KEFRIYRCIV
601: RFGYRDVHKD DFEFEGDLVC SIAEFIRTEA ETAATAAETN GEDDDRMSVV GTCSTYMQGI EDHYESDIDD PDKPGTSEIR SPKPKKKSKS KVKKRVRFVV
701: PETPKIEKET RQELMELTEA REGGVAYIMG NAYMKAKPGS GLLKRLAINI GYEFLRRNTR GPRNMLTSPH ASTLEVGMIY NV
Arabidopsis Description
POT6Potassium transporter 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8W4I4]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.