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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome

Predictor Summary:
  • nucleus 1
  • peroxisome 2
  • vacuole 2
  • extracellular 1
  • endoplasmic reticulum 1
  • plasma membrane 2
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:peroxisome
Any Predictor:nucleus, peroxisome, secretory
BaCelLo:nucleus
MultiLoc:peroxisome
Plant-mPloc:vacuole
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI

Inferred distinct locusB in Crop

locusBlocations
KXG21735

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G70300.1 KXG21735 AT5G05410.1 18552202
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d046679_P002 Maize plasma membrane 94.76 94.53
TraesCS7D01G388900.2 Wheat plasma membrane 83.78 83.07
TraesCS7A01G393600.1 Wheat plasma membrane 83.29 82.39
TraesCS7B01G295600.2 Wheat plasma membrane 82.8 82.3
Os06t0625900-01 Rice vacuole 83.66 81.38
HORVU7Hr1G092940.2 Barley plastid 83.66 77.69
GSMUA_Achr9P22670_001 Banana cytosol, peroxisome, plasma membrane 66.46 76.12
VIT_01s0026g00270.t01 Wine grape plasma membrane 69.88 73.65
CDY03755 Canola plasma membrane 59.51 73.38
CDY57844 Canola plasma membrane 62.2 72.86
VIT_14s0066g01580.t01 Wine grape plasma membrane 69.15 72.41
KRG93348 Soybean plasma membrane 68.17 71.67
PGSC0003DMT400001329 Potato cytosol, golgi, plasma membrane 67.32 71.5
Solyc05g005740.2.1 Tomato cytosol, plasma membrane, vacuole 67.93 71.5
KRH20327 Soybean plasma membrane 67.93 71.5
Solyc02g087000.2.1 Tomato plasma membrane 67.56 71.48
PGSC0003DMT400010525 Potato plasma membrane 67.44 70.99
KXG30825 Sorghum plasma membrane 66.46 70.41
CDY43004 Canola plasma membrane 65.98 69.63
AT1G70300.1 Thale cress plasma membrane 65.73 68.93
AT5G14880.1 Thale cress plasma membrane 65.12 68.37
Bra016225.1-P Field mustard cytosol, plasma membrane, vacuole 64.76 67.82
PGSC0003DMT400035889 Potato plasma membrane 40.61 67.41
Solyc04g025880.2.1 Tomato plasma membrane 63.54 67.23
CDY11599 Canola plasma membrane 64.27 67.13
KRH74619 Soybean plasma membrane 64.51 67.13
GSMUA_Achr1P09670_001 Banana plasma membrane 55.37 66.86
EER89587 Sorghum plasma membrane 62.32 66.11
KRH69531 Soybean plasma membrane 60.12 66.09
KRH45700 Soybean plasma membrane 62.68 65.56
KRG99315 Soybean plasma membrane 62.2 65.38
Bra007910.1-P Field mustard cytosol, plasma membrane, vacuole 44.15 64.99
EER99908 Sorghum plasma membrane 58.78 60.86
EER94895 Sorghum plasma membrane 57.68 58.76
EES02024 Sorghum plasma membrane 50.98 53.38
CDY03756 Canola cytosol 4.39 52.94
EER99886 Sorghum plasma membrane 49.63 51.65
KXG32509 Sorghum plasma membrane 47.56 48.09
OQU76859 Sorghum plasma membrane 45.37 47.75
OQU80069 Sorghum plasma membrane 42.32 43.92
Bra023490.1-P Field mustard cytosol, plasma membrane, vacuole 65.85 43.55
EER98483 Sorghum plasma membrane 41.22 42.95
EES12852 Sorghum plasma membrane 42.07 42.86
EES05152 Sorghum peroxisome 35.49 39.59
EES02013 Sorghum cytosol, peroxisome, plasma membrane 36.83 38.97
KXG26179 Sorghum plasma membrane 37.07 38.58
EER98827 Sorghum cytosol, peroxisome, plasma membrane 39.51 38.03
KXG34053 Sorghum cytosol, peroxisome, plasma membrane, plastid 35.61 37.68
EES10698 Sorghum cytosol, peroxisome, plasma membrane 35.61 37.06
EES10707 Sorghum plasma membrane 33.54 36.86
CDX85579 Canola plasma membrane 63.78 36.52
EER99435 Sorghum plasma membrane 37.2 36.18
EER91312 Sorghum cytosol, peroxisome, plasma membrane 35.37 35.63
CDX91017 Canola plasma membrane 65.98 35.45
KXG38128 Sorghum plasma membrane 33.54 33.95
KXG38125 Sorghum cytosol 34.27 33.94
EER91310 Sorghum plasma membrane 32.93 33.05
EES12835 Sorghum cytosol, nucleus, plasma membrane 33.41 32.16
OQU88287 Sorghum plasma membrane 34.51 30.4
Bra023491.1-P Field mustard cytosol, extracellular, mitochondrion, plastid 0.0 0.0
Protein Annotations
MapMan:24.2.3.11EntrezGene:8067672UniProt:C5Z687ncoils:CoilEnsemblPlants:EER90068ProteinID:EER90068
ProteinID:EER90068.1GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0005623GO:GO:0005886
GO:GO:0006810GO:GO:0006811GO:GO:0006813GO:GO:0008150GO:GO:0009987GO:GO:0015079
GO:GO:0016020GO:GO:0016021GO:GO:0071805InterPro:K+_transporterPFAM:PF02705PANTHER:PTHR30540
PANTHER:PTHR30540:SF18EnsemblPlantsGene:SORBI_3010G197500unigene:Sbi.7117TIGRFAMs:TIGR00794TMHMM:TMhelixUniParc:UPI0001A89A33
RefSeq:XP_002438701.1SEG:seg::::
Description
hypothetical protein
Coordinates
chr10:-:54053675..54058568
Molecular Weight (calculated)
91156.1 Da
IEP (calculated)
8.155
GRAVY (calculated)
0.276
Length
820 amino acids
Sequence
(BLAST)
001: MKSPPVMDPE APPPPGTPPY DDEEEEEEEE EEKARGARKR VPWRMTLSLA YQSLGVVYGD LSTSPLYVYK AAFAEDIQHS ESNDEILGVL SFVFWTLTLV
101: PLLKYVCVVL RADDHGEGGT FALYSLLCRH ARAALLPPGR TAAGEEDKFL DGATKKATAQ NGNAATLGGG AAASVRRLLQ RHKVLQRVLL VLALVGTCMV
201: IGDGVLTPAI SVFSAVSGLE LSMEKEHHKY VELPIACIIL VCLFALQHYG THRVGFIFAP VVITWLLCIS VIGVYNIIHW EPTVYRALSP YYMYKFLRKT
301: QRGGWMSLGG ILLCVTGSEA MFADLGHFNQ LSIQIAFTCM VYPALILAYM GQAAYLCKHH NMETDYRIGF YVSVPEKIRW PVMAIAILAA VVGSQAVITG
401: TFSMIKQCTS LGCFPRVKII HTSAKVHGQI YIPEINWILM ILCLAVTIGF RNTKHLGNAS GLAVITVMLV TTCLMSLVIV LCWHKSIFLA IAFIVFFGTI
501: EALYFSAALI KFKEGAWVPI VLALIFILIM CIWHYGTIKK YEFDVQSKVS INWLLGLSPN LGIVRVRGIG LIHTELETGI PAIFSHFVTN LPAFHQVLIF
601: MCIKNVPIPH VRPEERFLVG RIGPKQYRIY RCIVRYGYHD FHKDDIEFEK ELVCSVAEFI RSGSSKLNGM PVEFDEEQHM AVVRSNSIRM LEEEATTVEK
701: TVGPSHASRE IQSPSPSPSP SPATPVVVPK KRVRFVLPAA SPKPNAGVQE ELQELSDARE AGMAFILGHS HVKAKSGSSF LRRFVINFCY DFLRRNSRGP
801: NYAVSIPHAS TLEVGMMYYI
Best Arabidopsis Sequence Match ( AT5G14880.1 )
(BLAST)
001: MDLERLSPRN PVKKESWWTV LTLAYQSLGV VYGDLATSPL YVYKSTFAED ITHSETNEEI FGVLSLIFWT LTLIPLVKYV FIVLRADDNG EGGTFALYSL
101: LCRHARISSL PNFQLADEDL SEYKKNSGEN PMRLKVPGWS LKNTLEKHKF LQNMLLVLAL IGTCMVIGDG VLTPAISVFS AVSGLELSMS KQQHQYVEVP
201: VVCAILILLF SLQHYGTHRL GFVFAPIVLA WLLCISTIGV YNIFHWNPHV YKALSPYYIY KFLKKTRKRG WMSLGGILLC ITGSEAMFAD LGHFTQLSIQ
301: IAFTFAVYPS LILAYMGQAA YLSKHHVLQS DYRIGFYVSV PEQIRWPVLA IAILAAVVGS QAIITGTFSI IKQCTSLGCF PKVKIVHTSS RMHGQIYIPE
401: INWTLMLLCL AVTVGFRDTK HISNASGLAV ITVMLVTTCL MSLVIVLCWR KSSLYALAFI FFFGTIEVLY FSASLIKFLE GAWVPVALSF IFLLIMYVWH
501: YGTLKRYEFD VQNKVSINWL LTLFGSSNLG IVRVHGIGVI NTELVSGIPA IFSHFITNLP AFHQVVVFLC VKSVPVPHVK PEERFLVGRV GPKEYRLYRC
601: IARYGYRDVH KDDVEFENDL ICSIAEFIRS DKPLNYSPDP ENESGINERL TVVAASSSNL EGVQIYEDDG SDKQEPSSSS EVIMVAPSPR FKKRVRFVLP
701: ESARIDRSAE EELTELTEAR EAGMAFIMGH SYVRAKSGSS VMKKIAINFG YDFLRRNSRG PCYGLSTPHA STLEVGMVYI V
Arabidopsis Description
POT8Potassium transporter [Source:UniProtKB/TrEMBL;Acc:A0A178UBD9]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.