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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plasma membrane 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, nucleus, plasma membrane
BaCelLo:nucleus
MultiLoc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d003859_P001 Maize mitochondrion 89.97 86.04
EES10698 Sorghum cytosol, peroxisome, plasma membrane 62.69 62.69
EES05152 Sorghum peroxisome 56.35 60.41
EES10707 Sorghum plasma membrane 56.98 60.19
KXG34053 Sorghum cytosol, peroxisome, plasma membrane, plastid 57.87 58.84
EES02013 Sorghum cytosol, peroxisome, plasma membrane 57.74 58.71
KRH69024 Soybean cytosol, peroxisome, plasma membrane 43.4 58.46
VIT_01s0011g03020.t01 Wine grape cytosol, nucleus, plasma membrane 58.12 56.2
EER91312 Sorghum cytosol, peroxisome, plasma membrane 56.85 55.04
KRG97298 Soybean mitochondrion 54.95 54.4
Solyc12g005670.1.1 Tomato cytosol, peroxisome, plasma membrane 53.55 53.69
KXG38125 Sorghum cytosol 56.22 53.5
PGSC0003DMT400035722 Potato cytosol, peroxisome, plasma membrane 53.17 53.44
Bra003195.1-P Field mustard plasma membrane 48.22 53.3
KXG38128 Sorghum plasma membrane 54.57 53.09
KRH47652 Soybean cytosol, peroxisome, plasma membrane 53.68 52.61
EER91310 Sorghum plasma membrane 54.31 52.39
AT4G13420.1 Thale cress cytosol, peroxisome, plasma membrane 51.4 51.59
CDX67610 Canola cytosol, peroxisome, plasma membrane 48.86 51.54
GSMUA_Achr10P... Banana cytosol, peroxisome, plasma membrane 44.29 51.47
CDY07520 Canola cytosol, peroxisome, plasma membrane 50.38 50.64
OQU88287 Sorghum plasma membrane 55.96 47.37
OQU80069 Sorghum plasma membrane 40.74 40.63
EER98483 Sorghum plasma membrane 40.23 40.28
EES02024 Sorghum plasma membrane 39.85 40.1
EES12852 Sorghum plasma membrane 40.61 39.75
EER99908 Sorghum plasma membrane 39.47 39.27
EER98827 Sorghum cytosol, peroxisome, plasma membrane 42.39 39.2
EER99886 Sorghum plasma membrane 39.09 39.09
OQU76859 Sorghum plasma membrane 38.45 38.9
KXG30825 Sorghum plasma membrane 37.31 37.98
EER94895 Sorghum plasma membrane 38.32 37.52
EER90068 Sorghum peroxisome 38.58 37.07
KXG32509 Sorghum plasma membrane 38.07 36.99
EER99435 Sorghum plasma membrane 39.47 36.89
EER89587 Sorghum plasma membrane 35.41 36.09
EES12835 Sorghum cytosol, nucleus, plasma membrane 38.96 36.03
Protein Annotations
MapMan:24.2.3.11UniProt:A0A1B6PKI9GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810
GO:GO:0006811GO:GO:0006813GO:GO:0008150GO:GO:0009987GO:GO:0015079GO:GO:0016020
GO:GO:0016021GO:GO:0071805InterPro:K+_transporterEnsemblPlants:KXG26179ProteinID:KXG26179ProteinID:KXG26179.1
PFAM:PF02705PANTHER:PTHR30540PANTHER:PTHR30540:SF15EnsemblPlantsGene:SORBI_3006G061700TIGRFAMs:TIGR00794TMHMM:TMhelix
UniParc:UPI00081AE07ESEG:seg::::
Description
hypothetical protein
Coordinates
chr6:+:41702426..41707790
Molecular Weight (calculated)
88275.9 Da
IEP (calculated)
8.681
GRAVY (calculated)
0.268
Length
788 amino acids
Sequence
(BLAST)
001: MALETDKQNP REAKKLGGKF QRHDSLYGDA ERVSGTGYHG SEDNWARTLH LAFQCIGVIY GDIGTSPLYV YESTFTSGIN NVDDLYGVLS LILYSMILLP
101: MIKYVFIVLY ANDNGDGGTF ALYSLISRYA KVSLIPNQQA DDAMVSNYSL ETVSAPMKRA QWTKKMLESS KVAKLVIFLL TVLGTSMVIS DGVLTPAISV
201: ISAVSGLQQK APHLKQDQMV WISVAILVVL FAVQRFGTDK VGYSFAPIIL LWFLFIGGIG IYNLIKYDIG VLRAFYPKYI IDYFKTNGKD AWISLGGILL
301: CFTGTEAMFA DLGHFNIRSI QLSFSFILFP SVSLAYIGQA AFLRKHPEHV FDTFYKSIPG PLFWPTFIIA VSAAIIASQA MISGSFAIIS QSQTLGCFPR
401: VKVLHTSKLY EGQVYIPEVN FVLGFLCVIV TLGFKTTTNI GNAYGICVTS VMVITTILLV VVMVLIWRVS IWLIIPFCLV FGSIELVYLS SVLYKFKQGG
501: YLPIVAATIL VTIMGVWHYV HVKKYWYELE HIVTNKDMGE LIQAHDVKRT PGVGFLYTEL VQGVPPIFPH LIEKIPFVHS ILVFVSIKHL PIPHVEVAER
601: FRFRKVESRT SKMFRCVARY GYSDRIEGAK EFAASLIEGL QSYIEEGHFM TNIQETEAET TSITESNTRT RKASSSTVYI EEALRPSETT DLTQPRISSY
701: SGHSSGRISE DQSRTIAEEK QCIQSELQKG VVYILGETEI QAGPNSSFFK KIVVNYMYSF LRKNFRQGEK AFAIPRQQVL KVGMVYEI
Best Arabidopsis Sequence Match ( AT4G13420.1 )
(BLAST)
001: MDGEEHQIDG DEVNNHENKL NEKKKSWGKL YRPDSFIIEA GQTPTNTGRR SLMSWRTTMS LAFQSLGVVY GDIGTSPLYV YASTFTDGIN DKDDVVGVLS
101: LIIYTITLVA LLKYVFIVLQ ANDNGEGGTF ALYSLICRYA KMGLIPNQEP EDVELSNYTL ELPTTQLRRA HMIKEKLENS KFAKIILFLV TIMGTSMVIG
201: DGILTPSISV LSAVSGIKSL GQNTVVGVSV AILIVLFAFQ RFGTDKVGFS FAPIILVWFT FLIGIGLFNL FKHDITVLKA LNPLYIIYYF RRTGRQGWIS
301: LGGVFLCITG TEAMFADLGH FSVRAVQISF SCVAYPALVT IYCGQAAYLT KHTYNVSNTF YDSIPDPLYW PTFVVAVAAS IIASQAMISG AFSVISQSLR
401: MGCFPRVKVV HTSAKYEGQV YIPEINYLLM LACIAVTLAF RTTEKIGHAY GIAVVTVMVI TTLMVTLIML VIWKTNIVWI AIFLVVFGSI EMLYLSSVMY
501: KFTSGGYLPL TITVVLMAMM AIWQYVHVLK YRYELREKIS RENAIQMATS PDVNRVPGIG LFYTELVNGI TPLFSHYISN LSSVHSVFVL ISIKTLPVNR
601: VTSSERFFFR YVGPKDSGMF RCVVRYGYKE DIEEPDEFER HFVYYLKEFI HHEHFMSGGG GEVDETDKEE EPNAETTVVP SSNYVPSSGR IGSAHSSSSD
701: KIRSGRVVQV QSVEDQTELV EKAREKGMVY LMGETEITAE KESSLFKKFI VNHAYNFLKK NCREGDKALA IPRSKLLKVG MTYEL
Arabidopsis Description
POT5Potassium transporter [Source:UniProtKB/TrEMBL;Acc:Q53XI1]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.