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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plasma membrane 4
  • vacuole 2
  • extracellular 1
  • endoplasmic reticulum 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, secretory
BaCelLo:nucleus
MultiLoc:plasma membrane
Plant-mPloc:vacuole
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d042189_P004 Maize plasma membrane, plastid 97.32 97.32
Zm00001d011913_P002 Maize plasma membrane 94.64 93.32
TraesCS3B01G498200.1 Wheat plasma membrane 88.12 88.01
TraesCS3D01G450800.1 Wheat plasma membrane 87.87 87.76
TraesCS3A01G458000.1 Wheat plasma membrane 87.87 87.76
Os01t0935500-01 Rice plasma membrane 87.74 87.74
HORVU3Hr1G098670.4 Barley golgi, mitochondrion, plasma membrane 87.1 86.11
GSMUA_Achr10P... Banana plasma membrane 54.28 81.11
GSMUA_Achr5P08010_001 Banana plasma membrane 71.78 79.38
GSMUA_Achr11P... Banana plasma membrane 71.01 76.06
EER99886 Sorghum plasma membrane 73.69 73.22
GSMUA_Achr8P10010_001 Banana plasma membrane 67.82 72.74
KXG32509 Sorghum plasma membrane 67.31 64.98
Bra013718.1-P Field mustard plasma membrane 59.51 60.13
VIT_02s0025g00680.t01 Wine grape plasma membrane 61.3 60.08
CDY57658 Canola plasma membrane 54.02 60.0
CDY44124 Canola plasma membrane 59.64 59.72
KRH59991 Soybean plasma membrane 59.9 59.37
KRH41260 Soybean plasma membrane 59.39 58.79
EER94895 Sorghum plasma membrane 54.41 52.92
EER99908 Sorghum plasma membrane 53.51 52.9
KXG30825 Sorghum plasma membrane 52.11 52.71
EER89587 Sorghum plasma membrane 51.6 52.26
EER90068 Sorghum peroxisome 53.38 50.98
OQU76859 Sorghum plasma membrane 50.19 50.45
OQU80069 Sorghum plasma membrane 46.1 45.7
EER98483 Sorghum plasma membrane 45.59 45.36
EES12852 Sorghum plasma membrane 46.1 44.84
EER98827 Sorghum cytosol, peroxisome, plasma membrane 44.32 40.73
EES02013 Sorghum cytosol, peroxisome, plasma membrane 39.72 40.13
KXG26179 Sorghum plasma membrane 40.1 39.85
EES10707 Sorghum plasma membrane 37.8 39.68
EES05152 Sorghum peroxisome 37.16 39.59
KXG34053 Sorghum cytosol, peroxisome, plasma membrane, plastid 39.08 39.48
EER99435 Sorghum plasma membrane 41.76 38.79
EES10698 Sorghum cytosol, peroxisome, plasma membrane 38.7 38.45
EER91312 Sorghum cytosol, peroxisome, plasma membrane 37.04 35.63
KXG38125 Sorghum cytosol 36.91 34.9
EES12835 Sorghum cytosol, nucleus, plasma membrane 37.42 34.39
EER91310 Sorghum plasma membrane 34.99 33.54
KXG38128 Sorghum plasma membrane 34.48 33.33
OQU88287 Sorghum plasma membrane 37.8 31.79
Protein Annotations
MapMan:24.2.3.11EntrezGene:8062281UniProt:C5XH54EnsemblPlants:EES02024ProteinID:EES02024ProteinID:EES02024.1
GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0006811GO:GO:0006813
GO:GO:0008150GO:GO:0009987GO:GO:0015079GO:GO:0016020GO:GO:0016021GO:GO:0071805
InterPro:K+_transporterPFAM:PF02705PANTHER:PTHR30540PANTHER:PTHR30540:SF77EnsemblPlantsGene:SORBI_3003G418100unigene:Sbi.6855
TIGRFAMs:TIGR00794TMHMM:TMhelixUniParc:UPI0001A84B29RefSeq:XP_002456904.1SEG:seg:
Description
hypothetical protein
Coordinates
chr3:+:72386784..72392477
Molecular Weight (calculated)
87536.6 Da
IEP (calculated)
8.887
GRAVY (calculated)
0.370
Length
783 amino acids
Sequence
(BLAST)
001: MDAEAGVAGA DQLPRRQYYM NLLLLAYQSF GVVYGDLSTS PLYVYKSTFS GKLSQYQDEE TVFGVLSLIF WTFTLIPLLK YVTIVLSADD NGEGGPFALY
101: SLLCRHAKLS LLPNQQAADE ELSSYYRNGF APRNGSSPWL KRFLEKHKKM RTVLLLIVLC GASMVIGDGV LTPAISVLSS MSGLQVRATG LEHSSVVLLS
201: CIVLVGLFAL QHRGTQKVAF MFAPIVIIWL LSIGGIGLYN IFHWNPNIYQ ALSPYYMVKF FRKTGKDGWI ALGGILLSMT GSEAMFADLG HFTSASVRVA
301: FITVIYPCLI LQYMGHAAFL SKNTFHMPTS FYDTIPEPVF WPVFVVATLA AVVGSQAVIS ATFSIVKQCH ALGCFPRVKV VHTSRWIYGQ IYIPEINWIL
401: MVLCVAVTIA FRDTTLIGNA YGVACMTVML VTTFLMALII IFVWQRNIIF ALVFLVFFGS IEAVYLSSSL MKVPQGGWVP LVLAFIFMSV MYIWHYGLRR
501: KYQFDLQNKV SMRSILSLGP SLGIVRVPGI GLIYTELVTG VPSIFSHFVT NLPAFHEVLV FLCVKSVPVP YVSQDERYLV GRIGPKEYRM YRCIVRYGYK
601: DVQRDDDNFE NMLVMSIAKF IMMEAEDASS SASYDIANEG RMAVITTTDA SGSPLAMRDF NGLADSMTTR SSKSESLRSL QSSYEQESPS VSRRRRVRFE
701: VPEEDDMGQQ VKEELMALVE AKHAGVAYIM GHSYIKARRS SSFLKKFAID VGYSFLRKNC RGPSVTLHIP HISLIEVGMI YYV
Best Arabidopsis Sequence Match ( AT3G02050.1 )
(BLAST)
001: MAPAESGVSP RRNPSQLSWM NLSSNLILAY QSFGVVYGDL STSPLYVFPS TFIGKLHKHH NEDAVFGAFS LIFWTLTLIP LLKYLLVLLS ADDNGEGGTF
101: ALYSLLCRHA KLSLLPNQQA ADEELSAYKF GPSTDTVTSS PFRTFLEKHK RLRTALLLVV LFGAAMVIGD GVLTPALSVL SSLSGLQATE KNVTDGELLV
201: LACVILVGLF ALQHCGTHRV AFMFAPIVII WLISIFFIGL YNIIRWNPKI IHAVSPLYII KFFRVTGQDG WISLGGVLLS VTGTEAMFAN LGHFTSVSIR
301: VAFAVVVYPC LVVQYMGQAA FLSKNLGSIP NSFYDSVPDP VFWPVFVIAT LAAIVGSQAV ITTTFSIIKQ CHALGCFPRI KVVHTSKHIY GQIYIPEINW
401: ILMILTLAMA IGFRDTTLIG NAYGIACMVV MFITTFFMAL VIVVVWQKSC FLAALFLGTL WIIEGVYLSA ALMKVTEGGW VPFVLTFIFM IAMYVWHYGT
501: RRKYSFDLHN KVSLKWLLGL GPSLGIVRVP GIGLVYSELA TGVPAIFSHF VTNLPAFHKV VVFVCVKSVP VPHVSPEERF LIGRVCPKPY RMYRCIVRYG
601: YKDIQREDGD FENQLVQSIA EFIQMEASDL QSSASESQSN DGRMAVLSSQ KSLSNSILTV SEVEEIDYAD PTIQSSKSMT LQSLRSVYED EYPQGQVRRR
701: HVRFQLTASS GGMGSSVREE LMDLIRAKEA GVAYIMGHSY VKSRKSSSWL KKMAIDIGYS FLRKNCRGPA VALNIPHISL IEVGMIYYV
Arabidopsis Description
POT4Potassium transporter 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LD18]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.