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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plasma membrane 4
  • vacuole 2
  • extracellular 1
  • endoplasmic reticulum 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, secretory
BaCelLo:nucleus
MultiLoc:plasma membrane
Plant-mPloc:vacuole
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d022449_P002 Maize cytosol, peroxisome, plasma membrane 92.8 87.6
Os07t0679000-01 Rice plasma membrane 84.34 84.77
TraesCS2D01G106600.1 Wheat plasma membrane 81.69 82.95
TraesCS2B01G123700.1 Wheat plasma membrane 81.44 82.48
TraesCS2A01G107100.1 Wheat plasma membrane 81.44 82.48
HORVU2Hr1G018190.12 Barley plasma membrane 81.57 79.56
EER94895 Sorghum plasma membrane 78.28 77.02
GSMUA_Achr8P01760_001 Banana plasma membrane 69.95 73.47
GSMUA_Achr11P... Banana plasma membrane 65.78 72.16
CDX93172 Canola cytosol, golgi, plasma membrane 69.19 70.53
VIT_13s0067g02570.t01 Wine grape plasma membrane 70.45 70.37
CDY06982 Canola plasma membrane 68.94 70.36
PGSC0003DMT400062466 Potato plasma membrane 69.57 69.75
KRH53743 Soybean plasma membrane 69.44 69.62
KRH64195 Soybean plasma membrane 69.32 69.49
Bra016986.1-P Field mustard cytosol, golgi, plasma membrane 69.95 68.65
KXG30825 Sorghum plasma membrane 60.35 61.76
EER89587 Sorghum plasma membrane 58.08 59.51
EER90068 Sorghum peroxisome 60.86 58.78
Solyc06g050170.2.1 Tomato plasma membrane 69.44 55.89
EES02024 Sorghum plasma membrane 52.9 53.51
EER99886 Sorghum plasma membrane 51.89 52.16
OQU76859 Sorghum plasma membrane 50.38 51.22
KXG32509 Sorghum plasma membrane 50.0 48.83
CDY23894 Canola cytosol, golgi, plasma membrane 69.44 43.17
OQU80069 Sorghum plasma membrane 42.42 42.53
EER98483 Sorghum plasma membrane 41.79 42.06
EES12852 Sorghum plasma membrane 41.92 41.24
EES05152 Sorghum peroxisome 37.75 40.68
KXG26179 Sorghum plasma membrane 39.27 39.47
EES02013 Sorghum cytosol, peroxisome, plasma membrane 37.88 38.71
KXG34053 Sorghum cytosol, peroxisome, plasma membrane, plastid 37.63 38.45
EES10707 Sorghum plasma membrane 36.11 38.34
EER98827 Sorghum cytosol, peroxisome, plasma membrane 40.66 37.79
EER91312 Sorghum cytosol, peroxisome, plasma membrane 38.38 37.35
EES10698 Sorghum cytosol, peroxisome, plasma membrane 36.74 36.93
EER99435 Sorghum plasma membrane 38.38 36.06
KXG38125 Sorghum cytosol 37.5 35.87
KXG38128 Sorghum plasma membrane 35.35 34.57
EER91310 Sorghum plasma membrane 34.85 33.78
EES12835 Sorghum cytosol, nucleus, plasma membrane 34.85 32.39
OQU88287 Sorghum plasma membrane 37.88 32.22
Protein Annotations
MapMan:24.2.3.11EntrezGene:8078559UniProt:C5X5L3EnsemblPlants:EER99908ProteinID:EER99908ProteinID:EER99908.1
GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0005623GO:GO:0005886GO:GO:0006810
GO:GO:0006811GO:GO:0006813GO:GO:0008150GO:GO:0009987GO:GO:0015079GO:GO:0016020
GO:GO:0016021GO:GO:0071805InterPro:K+_transporterPFAM:PF02705PANTHER:PTHR30540PANTHER:PTHR30540:SF26
EnsemblPlantsGene:SORBI_3002G417500TIGRFAMs:TIGR00794TMHMM:TMhelixUniParc:UPI0001A847F1RefSeq:XP_002463387.1SEG:seg
Description
hypothetical protein
Coordinates
chr2:-:76471872..76476091
Molecular Weight (calculated)
87536.8 Da
IEP (calculated)
7.371
GRAVY (calculated)
0.337
Length
792 amino acids
Sequence
(BLAST)
001: MDPEFGVGTA PRKREAWRTT LLLAYQSLGV VYGDLSISPL YVYKSTFAED ITHSEGNEEI YGALSFVFWT LTLIPLLKYV TIVLRAHDNG EGGTFALYSL
101: ICRHANVCLL PNRQLADQDL STYSLQRPHD AAGTCAPSPV KAWLENHTKL HTALLVMVMI GTCMVIGDGV LTPAISVFSA VSGLELSLSK DQHEYAVIPI
201: TCAILVFLFA LQHYGTHRVG FLFAPIILAW LLCMSTIGLY NIIRWNPQIY TALNPSYMIR FLRKTKKSGW MSLGGILLCM TGSEAMFADL GHFSYSSIQL
301: AFTSLVYPSL ILGYMGQAAY LSQHHNLDAS YQIGFYIAVP ESVRWPVLVL AILASVVGSQ AIISGTFSII NQSQSLSCFP RVKVVHTSDK VHGQIYIPEV
401: NWILMILCVA VTVGFRNTKH MGNASGLAVI TVMLVTTCLM SLVIMLCWDR SPWLALAFFL FFGSIEALYF SASLIKFLEG AWLPIFLALI LLAIMFVWHY
501: TTIRKYEYDM HNKVTLEWLL ALGDKLGMVR VPGIGLVYTD LTSGVPANFS RFVTNLPAFH RVLVFVCVKS VTVPHVLPAE RYLVGRVGPP GHRSYRCIVR
601: YGYRDVHQDV DSFETELVES LATFIKLDAL FRCSDAGGEQ RDSSYYEREN ALTVIGSNPL RRHMSLGYDD SHSHDDGASS DSDSVDGIEL AASAPAPAAV
701: KKQVRFAVPP PRSPGVDESV LEELHELCEA REAGTAFILG HSHVKTKPGS SLLKRLAVGV GYNFLRRNCR GPDVALRVPP ASLLEVGMVY VL
Best Arabidopsis Sequence Match ( AT2G40540.3 )
(BLAST)
001: MDLNLGKCCG SRSSKKESWR SVLLLAYQSL GVVYGDLSIS PLYVFKSTFA EDIQHSETNE EIYGVMSFVF WTLTLVPLLK YVFIVLRADD NGEGGTFALY
101: SLICRHVKVS LLPNRQVSDE ALSTYKLEHP PEKNHDSCVK RYLEKHKWLH TALLLLVLLG TCMVIGDGLL TPAISVFSAV SGLELNMSKE HHQYAVIPIT
201: CFILVCLFSL QHFGTHRVGF VFAPIVLTWL LCISGIGLYN IIQWNPHIYK ALSPTYMFMF LRKTRVSGWM SLGGILLCIT GAEAMFADLG HFNYAAIQIA
301: FTFLVYPALI LAYMGQAAYL SRHHHSAHAI GFYVSVPKCL HWPVLAVAIL ASVVGSQAII SGTFSIINQS QSLGCFPRVK VIHTSDKMHG QIYIPEINWM
401: LMILCIAVTI GFRDVKHLGN ASGLAVMAVM LVTTCLTSLV IVLCWHKPPI LALAFLLFFG SIELLYFSAS LTKFREGAWL PILLSLIFMI IMFVWHYTTI
501: KKYEFDLQNK VSLEWLLALG PSLGISRVPG IGLVFTDLTS GIPANFSRFV TNLPAFHRVL VFVCVKSVPV PFVPPAERYL VGRVGPVDHR SYRCIVRYGY
601: RDVHQDVDSF ETELVSKLAD FIRYDWHKRT QQEDDNARSV QSNESSSESR LAVIGTVAYE IEDNLQPESV SIGFSTVESM EDVIQMAEPA PTATIRRVRF
701: AVEENSYEDE GSTSSAEADA ELRSELRDLL AAQEAGTAFI LGHSHVKAKQ GSSVMKRLAV NFGYNFLRRN CRGPDVALKV PPVSLLEVGM VYVV
Arabidopsis Description
POT2Potassium transporter [Source:UniProtKB/TrEMBL;Acc:A0A178VTZ5]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.