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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • golgi 2
  • vacuole 2
  • extracellular 1
  • endoplasmic reticulum 1
  • plasma membrane 3
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:plastid, secretory
BaCelLo:plastid
MultiLoc:golgi
Plant-mPloc:vacuole
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
KXG21735

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G70300.1 KXG21735 AT5G05410.1 18552202
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d037305_P001 Maize plasma membrane 94.7 95.19
TraesCS7D01G211800.1 Wheat plasma membrane 78.91 79.12
TraesCS7B01G116700.2 Wheat plasma membrane 78.91 79.12
TraesCS7A01G209900.1 Wheat plasma membrane 78.27 78.37
Os06t0270200-00 Rice plasma membrane 76.33 76.62
KXG30825 Sorghum plasma membrane 75.03 74.94
HORVU7Hr1G042800.11 Barley mitochondrion, plasma membrane 73.74 73.08
GSMUA_Achr9P22670_001 Banana cytosol, peroxisome, plasma membrane 65.46 70.67
CDY57844 Canola plasma membrane 63.0 69.57
HORVU7Hr1G053250.1 Barley cytosol 18.37 67.62
CDY03755 Canola plasma membrane 58.09 67.52
VIT_01s0026g00270.t01 Wine grape plasma membrane 67.79 67.35
PGSC0003DMT400001329 Potato cytosol, golgi, plasma membrane 67.01 67.1
VIT_14s0066g01580.t01 Wine grape plasma membrane 67.79 66.92
Solyc02g087000.2.1 Tomato plasma membrane 67.01 66.84
KRG93348 Soybean plasma membrane 66.36 65.77
KRH20327 Soybean plasma membrane 65.98 65.47
AT5G14880.1 Thale cress plasma membrane 65.85 65.17
Solyc05g005740.2.1 Tomato cytosol, plasma membrane, vacuole 65.59 65.08
PGSC0003DMT400010525 Potato plasma membrane 65.33 64.83
AT1G70300.1 Thale cress plasma membrane 65.33 64.58
CDY43004 Canola plasma membrane 64.81 64.48
PGSC0003DMT400035889 Potato plasma membrane 41.14 64.37
Bra016225.1-P Field mustard cytosol, plasma membrane, vacuole 64.55 63.73
CDY11599 Canola plasma membrane 64.42 63.44
KRH45700 Soybean plasma membrane 64.17 63.27
Solyc04g025880.2.1 Tomato plasma membrane 63.26 63.1
KRH74619 Soybean plasma membrane 63.78 62.56
KRH69531 Soybean plasma membrane 60.28 62.47
KRG99315 Soybean plasma membrane 63.0 62.44
EER90068 Sorghum peroxisome 66.11 62.32
CDY03756 Canola cytosol 5.43 61.76
GSMUA_Achr1P09670_001 Banana plasma membrane 54.2 61.71
Bra007910.1-P Field mustard cytosol, plasma membrane, vacuole 42.69 59.25
EER99908 Sorghum plasma membrane 59.51 58.08
EER94895 Sorghum plasma membrane 57.96 55.65
EES02024 Sorghum plasma membrane 52.26 51.6
EER99886 Sorghum plasma membrane 52.52 51.52
OQU76859 Sorghum plasma membrane 48.25 47.88
KXG32509 Sorghum plasma membrane 49.81 47.47
OQU80069 Sorghum plasma membrane 42.82 41.9
EER98483 Sorghum plasma membrane 42.04 41.3
Bra023490.1-P Field mustard cytosol, plasma membrane, vacuole 66.11 41.21
EES12852 Sorghum plasma membrane 42.3 40.62
EER98827 Sorghum cytosol, peroxisome, plasma membrane 41.66 37.79
EES05152 Sorghum peroxisome 35.32 37.14
EES02013 Sorghum cytosol, peroxisome, plasma membrane 36.22 36.13
EES10707 Sorghum plasma membrane 34.28 35.52
KXG26179 Sorghum plasma membrane 36.09 35.41
KXG34053 Sorghum cytosol, peroxisome, plasma membrane, plastid 35.32 35.23
EER91312 Sorghum cytosol, peroxisome, plasma membrane 37.0 35.14
EER99435 Sorghum plasma membrane 38.16 34.99
CDX85579 Canola plasma membrane 64.17 34.64
EES10698 Sorghum cytosol, peroxisome, plasma membrane 34.8 34.14
KXG38125 Sorghum cytosol 36.09 33.7
CDX91017 Canola plasma membrane 66.11 33.49
KXG38128 Sorghum plasma membrane 34.41 32.84
EER91310 Sorghum plasma membrane 33.76 31.95
EES12835 Sorghum cytosol, nucleus, plasma membrane 33.76 30.63
OQU88287 Sorghum plasma membrane 35.58 29.54
Bra023491.1-P Field mustard cytosol, extracellular, mitochondrion, plastid 0.0 0.0
Protein Annotations
MapMan:24.2.3.11EntrezGene:8065785UniProt:C5Z8G0ncoils:CoilEnsemblPlants:EER89587ProteinID:EER89587
ProteinID:EER89587.1GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0005623GO:GO:0005886
GO:GO:0006810GO:GO:0006811GO:GO:0006813GO:GO:0008150GO:GO:0009987GO:GO:0015079
GO:GO:0016020GO:GO:0016021GO:GO:0071805InterPro:K+_transporterPFAM:PF02705PANTHER:PTHR30540
PANTHER:PTHR30540:SF17EnsemblPlantsGene:SORBI_3010G112800unigene:Sbi.21021TIGRFAMs:TIGR00794TMHMM:TMhelixUniParc:UPI0001A89A23
RefSeq:XP_002438220.1SEG:seg::::
Description
hypothetical protein
Coordinates
chr10:-:11688674..11694514
Molecular Weight (calculated)
85446.4 Da
IEP (calculated)
8.198
GRAVY (calculated)
0.363
Length
773 amino acids
Sequence
(BLAST)
001: MDAESGRGAA SARKKSWRSE LVLAYQSLGV VYGEVATSPL YVYKSAFAGG DIDHSEGNEE IYGVLSLVFW TLTLITLLKY VLVVLRADDD GEGGTFALYS
101: LICRRVRAGL LPGVVGDSSA ADDELKEQRD GGALPPLASS VRAALQQRRE LQWLLLMFAL LGTSMVIGDG VLTPAVSVFS AVSGLKLSMV NEQHQYVLLP
201: VTCVILVGLF ALQHFGTHRV GFLFAPIVCL WLACISAIGV YNIFIWNPHI YKALSPYYMH SFIQKTQVGG WMSLGGILLC VTGSEAMYAD LGHFSQSSIK
301: IAFTMVVYPS LVLAYMGQAA YISQHHNFER NHHIGFYISV PEKIRWPVLG IAILAAVVGS QAVITGTFSV IKQCCSLNCF PRVKIVHTSS TVHGQIYIPE
401: INWILMILCL AVTIGFRNTK QMANAQGLAV ITVMIVTTCF MSLVIVLCWN KNVVFALAFL LFFGAIEAVY FSASLVKFHE GAWVPIILSF TFLIVMCVWH
501: YGTTKKYEFD VENKVSISWL LNLGPSLGIV RVRGIGLIHT ELVSGIPAIF SHFVTNLPAF HQVLVFLCIK SVSVPHVQSE ERFLVGRIGL KQYRLYRVVV
601: RYGYRDVQQD SLEFEKALVS SIAEFIRSGD SDQNGYPDGS ESPYERLSII SKGLPFQEAY GEVEGSPESS VRKDTNRNLV SSKSTRVRFV LPENAQINSE
701: VRNELQELTE AREAGMSFIM GRSYMKAKSG SSLMKRIAIN FIYEFLTRNS RGPAYAANVP HVSTLEVGMV CQV
Best Arabidopsis Sequence Match ( AT1G70300.1 )
(BLAST)
001: MEIESGSYQN AKKESWRTVL TLAYQSLGVV YGDLSISPLY VYKSTFAEDI HHSESNEEIF GVLSFIFWTI TLVPLLKYVF IVLRADDNGE GGTFALYSLL
101: CRHARVNSLP SCQLADEQLI EYKTDSIGSS SMPQSGFAAS LKSTLEKHGV LQKILLVLAL IGTCMVIGDG VLTPAISVFS AVSGVELSMS KEHHKYIELP
201: AACVILIGLF ALQHYGTHRV GFLFAPVILL WLMCISAIGV YNIFHWNPHV YQALSPYYMY KFLKKTQSRG WMSLGGILLC ITGSEAMFAD LGHFSQLSIK
301: IAFTSLVYPS LILAYMGQAA YLSQHHIIES EYNIGFYVSV PERLRWPVLV IAILAAVVGS QAIITGTFSI IKQCSALGCF PKVKIVHTSS KIHGQIYIPE
401: INWILMVLCL AVTIGFRDTK RLGNASGLAV ITVMLVTTCL MSLVIVLCWH KSVIFAIVFV VFFGTIESLY FSASLIKFLE GAWVPIALAF CFLLAMCTWH
501: YGTLKRYEYD VQNKVSVNWL LSLSQTLGIA RVRGLGLIHT ELVSGVPAIF SHFVTNLPAF HQVLVFLCVK SVPVPHVRPQ ERFLVGRIGP KEFRIYRCIV
601: RFGYRDVHKD DFEFEGDLVC SIAEFIRTEA ETAATAAETN GEDDDRMSVV GTCSTYMQGI EDHYESDIDD PDKPGTSEIR SPKPKKKSKS KVKKRVRFVV
701: PETPKIEKET RQELMELTEA REGGVAYIMG NAYMKAKPGS GLLKRLAINI GYEFLRRNTR GPRNMLTSPH ASTLEVGMIY NV
Arabidopsis Description
POT6Potassium transporter 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8W4I4]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.