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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • vacuole 2
  • extracellular 1
  • golgi 1
  • plasma membrane 3
  • endoplasmic reticulum 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, plasma membrane, vacuole
BaCelLo:nucleus
MultiLoc:vacuole
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX70151
CDX98843
CDY04950
CDY52149

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G70300.1 CDX70151 AT5G05410.1 18552202
AT1G70300.1 CDX98843 AT5G05410.1 18552202
AT1G70300.1 CDY04950 AT5G05410.1 18552202
AT1G70300.1 CDY52149 AT5G05410.1 18552202
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY57844 Canola plasma membrane 88.03 98.71
Bra016225.1-P Field mustard cytosol, plasma membrane, vacuole 98.09 98.34
CDY03756 Canola cytosol 8.28 95.59
CDY43004 Canola plasma membrane 92.36 93.31
CDY03755 Canola plasma membrane 78.6 92.78
AT1G70300.1 Thale cress plasma membrane 89.3 89.64
VIT_01s0026g00270.t01 Wine grape plasma membrane 76.43 77.12
GSMUA_Achr7P20040_001 Banana plasma membrane 66.24 75.8
Solyc05g005740.2.1 Tomato cytosol, plasma membrane, vacuole 74.78 75.35
GSMUA_Achr9P22670_001 Banana cytosol, peroxisome, plasma membrane 68.66 75.28
PGSC0003DMT400010525 Potato plasma membrane 74.52 75.1
KRH74619 Soybean plasma membrane 73.12 72.84
GSMUA_Achr3P06140_001 Banana plasma membrane 66.24 72.83
Solyc04g025880.2.1 Tomato plasma membrane 71.21 72.13
KRH45700 Soybean plasma membrane 70.96 71.05
KRH69531 Soybean plasma membrane 67.26 70.78
KRG99315 Soybean plasma membrane 70.19 70.64
PGSC0003DMT400035889 Potato plasma membrane 44.33 70.45
Os02t0730300-01 Rice plasma membrane 66.37 67.66
Zm00001d017925_P004 Maize plasma membrane 66.37 67.4
TraesCS7D01G211800.1 Wheat plasma membrane 65.99 67.19
TraesCS7B01G116700.2 Wheat plasma membrane 65.99 67.19
KXG30825 Sorghum plasma membrane 66.24 67.18
Zm00001d051756_P004 Maize plasma membrane 65.61 67.06
TraesCS7A01G209900.1 Wheat plasma membrane 65.86 66.97
TraesCS6D01G273100.1 Wheat plasma membrane 64.59 66.02
TraesCS6B01G322300.3 Wheat plasma membrane 64.46 65.89
TraesCS6A01G291900.2 Wheat plasma membrane 64.33 65.67
Os06t0270200-00 Rice plasma membrane 64.08 65.32
GSMUA_Achr1P09670_001 Banana plasma membrane 56.31 65.1
TraesCS7B01G295600.2 Wheat plasma membrane 68.41 65.09
TraesCS7D01G388900.2 Wheat plasma membrane 68.41 64.93
TraesCS7A01G393600.1 Wheat plasma membrane 68.41 64.78
Zm00001d037305_P001 Maize plasma membrane 63.31 64.63
EER89587 Sorghum plasma membrane 63.44 64.42
Zm00001d046679_P002 Maize plasma membrane 67.39 64.36
EER90068 Sorghum peroxisome 67.13 64.27
HORVU6Hr1G073030.13 Barley plasma membrane, vacuole 64.46 64.21
Os06t0625900-01 Rice vacuole 68.03 63.35
HORVU7Hr1G042800.11 Barley mitochondrion, plasma membrane 61.4 61.79
CDX93172 Canola cytosol, golgi, plasma membrane 61.15 61.78
CDY06982 Canola plasma membrane 60.76 61.47
HORVU7Hr1G092940.2 Barley plastid 68.53 60.93
Zm00001d036784_P002 Maize plasma membrane 63.18 58.7
CDY24033 Canola plasma membrane 51.08 56.48
CDX84861 Canola plasma membrane 51.08 56.4
CDY02026 Canola plasma membrane 50.96 56.18
CDY10706 Canola plasma membrane 50.96 56.02
HORVU7Hr1G053250.1 Barley cytosol 13.89 51.9
CDY28663 Canola plasma membrane 50.32 51.3
CDX84264 Canola cytosol, peroxisome, plasma membrane 44.46 47.94
CDY44124 Canola plasma membrane 47.26 47.44
CDY57658 Canola plasma membrane 42.55 47.38
CDY27164 Canola cytosol, peroxisome, plasma membrane 45.48 47.16
CDY31662 Canola cytosol, peroxisome, plasma membrane 45.61 45.49
CDY12441 Canola plasma membrane 45.99 45.47
CDY51891 Canola cytosol, peroxisome, plasma membrane 43.95 43.67
CDY01623 Canola cytosol, peroxisome, plasma membrane 44.2 43.48
CDX98647 Canola cytosol, peroxisome, plasma membrane 43.95 42.7
CDY53008 Canola cytosol, peroxisome, plasma membrane 43.57 42.54
CDY64551 Canola cytosol, peroxisome, plasma membrane 43.57 42.33
CDX78964 Canola cytosol, peroxisome, plasma membrane 43.69 42.24
CDX98648 Canola cytosol 43.57 42.22
CDY65345 Canola plasma membrane 41.91 41.44
CDY01618 Canola cytosol, peroxisome, plasma membrane 36.82 40.76
CDX67610 Canola cytosol, peroxisome, plasma membrane 37.07 38.96
CDX85579 Canola plasma membrane 70.32 38.55
CDY07520 Canola cytosol, peroxisome, plasma membrane 37.96 38.01
CDY54954 Canola cytosol, peroxisome, plasma membrane 43.31 37.82
CDY23894 Canola cytosol, golgi, plasma membrane 61.15 37.68
CDX91017 Canola plasma membrane 72.74 37.42
CDY24518 Canola cytosol, peroxisome, plasma membrane 43.31 35.6
CDX68987 Canola cytosol, nucleus, plasma membrane 38.09 35.18
CDX75364 Canola cytosol, nucleus, plasma membrane 37.71 34.58
CDX78358 Canola cytosol, nucleus, plasma membrane 37.58 34.14
CDX81125 Canola cytosol, nucleus, plasma membrane 37.58 34.14
CDY65138 Canola cytosol 3.31 25.24
Protein Annotations
MapMan:24.2.3.11GO:A0A078FF77UniProt:A0A078FF77EnsemblPlants:CDY11599ProteinID:CDY11599ProteinID:CDY11599.1
GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0006811GO:GO:0006813
GO:GO:0008150GO:GO:0009987GO:GO:0015079GO:GO:0016020GO:GO:0016021GO:GO:0071805
EnsemblPlantsGene:GSBRNA2T00049716001InterPro:K+_transporterPFAM:PF02705PANTHER:PTHR30540PANTHER:PTHR30540:SF10TIGRFAMs:TIGR00794
TMHMM:TMhelixUniParc:UPI0004EEA796SEG:seg:::
Description
BnaC06g31400DPotassium transporter [Source:UniProtKB/TrEMBL;Acc:A0A078FF77]
Coordinates
chrLK032012:+:413357..416823
Molecular Weight (calculated)
87489.1 Da
IEP (calculated)
8.285
GRAVY (calculated)
0.251
Length
785 amino acids
Sequence
(BLAST)
001: MDIESRSYQN TVKKESWRTV LTLAYQSLGV VYGDLSISPL YVFKSTFAED IEHSDSNEEI FGVLSFIVWT ITLVPLFKYV FIVLRADDNG EGGTFALYSL
101: LCRHARVNSL PSCQLADEQL AEYKTESPSE EEMGPPSGFA ARLKSTLEKR RVLQKVLLVL ALIGTCMVIG DGVLTPAISV FSAVSGVELS TAKEHHKYIE
201: VPAACVILIG LFALQHYGTH RVGFLFAPVI LLWLMCISAI GVYNIFHWNP HVYQALSPYY MYKFLKKTQS RGWMSLGGIL LCITGSEAMF ADLGHFSQLS
301: IKIAFTSLVY PSLILAYMGQ AAYLSQHHVI DTSYNIGFYV SVPEKLRWPV LVIAILAAVV GSQAIITGTF SIIKQCSALG CFPKVKIVHT SSKIHGQIYI
401: PEINWLLMVL CLAVTIGFRD TKRLGNASGL AVITVMLVTT CLMSLVIVLC WHKNILFAIA FVVFFGTIES LYFTASLIKF LEGAWVPVAL SLCFLAAMCT
501: WHYGTLKRYE FDVQNKVSVN WLLSLGQTLG IKRVRGVGLI HTELVSGVPA IFSHFVTNLP AFHQVLVFLC VKSVPVPHVR PEERFLVGRV GPKQYRMYRC
601: IVRYGYRDVH KDDIEFEGDL VCSIAEYVRS EAAATVVEET NGDDDDERMS VVGTCSTYMQ GVEDHDGSDL DDPDKPGTSE IRSPMAKKKK KKSKVKKKVR
701: FIVPETPKIE KETREELMEL TEAREGGVAY IMGNAYMRAK HGSGLVKRVA INVGYEFLRR NTRGPRTALT SPHASTLEVG VIYHV
Best Arabidopsis Sequence Match ( AT1G70300.1 )
(BLAST)
001: MEIESGSYQN AKKESWRTVL TLAYQSLGVV YGDLSISPLY VYKSTFAEDI HHSESNEEIF GVLSFIFWTI TLVPLLKYVF IVLRADDNGE GGTFALYSLL
101: CRHARVNSLP SCQLADEQLI EYKTDSIGSS SMPQSGFAAS LKSTLEKHGV LQKILLVLAL IGTCMVIGDG VLTPAISVFS AVSGVELSMS KEHHKYIELP
201: AACVILIGLF ALQHYGTHRV GFLFAPVILL WLMCISAIGV YNIFHWNPHV YQALSPYYMY KFLKKTQSRG WMSLGGILLC ITGSEAMFAD LGHFSQLSIK
301: IAFTSLVYPS LILAYMGQAA YLSQHHIIES EYNIGFYVSV PERLRWPVLV IAILAAVVGS QAIITGTFSI IKQCSALGCF PKVKIVHTSS KIHGQIYIPE
401: INWILMVLCL AVTIGFRDTK RLGNASGLAV ITVMLVTTCL MSLVIVLCWH KSVIFAIVFV VFFGTIESLY FSASLIKFLE GAWVPIALAF CFLLAMCTWH
501: YGTLKRYEYD VQNKVSVNWL LSLSQTLGIA RVRGLGLIHT ELVSGVPAIF SHFVTNLPAF HQVLVFLCVK SVPVPHVRPQ ERFLVGRIGP KEFRIYRCIV
601: RFGYRDVHKD DFEFEGDLVC SIAEFIRTEA ETAATAAETN GEDDDRMSVV GTCSTYMQGI EDHYESDIDD PDKPGTSEIR SPKPKKKSKS KVKKRVRFVV
701: PETPKIEKET RQELMELTEA REGGVAYIMG NAYMKAKPGS GLLKRLAINI GYEFLRRNTR GPRNMLTSPH ASTLEVGMIY NV
Arabidopsis Description
POT6Potassium transporter 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8W4I4]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.