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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:
  • nucleus 1
  • cytosol 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
  • golgi 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plasma membrane
Any Predictor:cytosol, nucleus, peroxisome
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX98647 Canola cytosol, peroxisome, plasma membrane 97.49 96.29
CDX98648 Canola cytosol 88.6 87.28
CDY64551 Canola cytosol, peroxisome, plasma membrane 84.84 83.79
CDY51891 Canola cytosol, peroxisome, plasma membrane 82.58 83.42
CDY53008 Canola cytosol, peroxisome, plasma membrane 83.96 83.33
CDX78964 Canola cytosol, peroxisome, plasma membrane 83.46 82.02
CDY01618 Canola cytosol, peroxisome, plasma membrane 71.8 80.82
AT4G19960.3 Thale cress cytosol, peroxisome, plasma membrane 84.34 80.79
CDY65345 Canola plasma membrane 74.44 74.81
CDX84264 Canola cytosol, peroxisome, plasma membrane 65.29 71.57
VIT_01s0011g01510.t01 Wine grape plasma membrane 69.05 69.75
CDY27164 Canola cytosol, peroxisome, plasma membrane 65.54 69.09
KRH12204 Soybean plasma membrane 64.41 68.62
Solyc02g068590.2.1 Tomato peroxisome, plasma membrane, vacuole 68.05 68.47
PGSC0003DMT400046034 Potato plasma membrane 67.17 68.37
GSMUA_Achr2P02640_001 Banana plasma membrane 48.37 68.32
KRH58500 Soybean plasma membrane 67.67 68.27
Solyc02g031840.2.1 Tomato plasma membrane 67.04 68.24
Os08t0206400-01 Rice cytosol, golgi, nucleus 11.28 68.18
PGSC0003DMT400027038 Potato peroxisome, plasma membrane, vacuole 67.67 68.18
CDY31662 Canola cytosol, peroxisome, plasma membrane 67.17 68.11
KRH37223 Soybean plasma membrane 66.92 67.59
GSMUA_Achr5P00220_001 Banana plasma membrane 64.54 67.06
GSMUA_Achr11P... Banana mitochondrion, plasma membrane 65.54 67.05
CDY12441 Canola plasma membrane 66.67 67.0
Os04t0613900-01 Rice plasma membrane 65.54 66.12
KRH42381 Soybean plasma membrane 67.54 65.73
OQU80069 Sorghum plasma membrane 64.41 65.06
HORVU2Hr1G098940.4 Barley plasma membrane 63.78 64.27
TraesCS1A01G047200.2 Wheat plasma membrane 63.53 64.18
TraesCS5A01G366100.1 Wheat peroxisome 63.03 64.08
TraesCS1D01G048200.2 Wheat plasma membrane 63.41 64.05
TraesCS2B01G441100.1 Wheat plasma membrane 63.53 64.02
TraesCS2D01G419000.2 Wheat plasma membrane 63.53 64.02
TraesCS1B01G061200.3 Wheat plasma membrane 62.78 63.98
TraesCS5B01G368500.1 Wheat peroxisome 62.91 63.95
TraesCS2A01G422600.1 Wheat plasma membrane 63.41 63.89
Zm00001d024300_P003 Maize plasma membrane 64.04 63.88
EES12852 Sorghum plasma membrane 64.41 63.85
EER98483 Sorghum plasma membrane 62.78 63.66
TraesCS5D01G375700.1 Wheat peroxisome 62.41 63.44
Os09t0563200-01 Rice plasma membrane 62.78 63.18
Zm00001d026289_P004 Maize plasma membrane 64.41 63.15
GSMUA_Achr4P33190_001 Banana plasma membrane 59.27 63.07
HORVU1Hr1G009100.7 Barley plasma membrane 63.03 62.33
HORVU5Hr1G090010.6 Barley plasma membrane 62.78 62.16
Zm00001d019631_P003 Maize plasma membrane 63.03 61.95
GSMUA_Achr8P33490_001 Banana plasma membrane 60.65 61.58
CDY65138 Canola cytosol 7.89 61.16
Zm00001d002333_P003 Maize plasma membrane 64.04 59.49
CDY57844 Canola plasma membrane 43.11 49.14
CDY03755 Canola plasma membrane 40.48 48.57
CDY10706 Canola plasma membrane 41.48 46.36
CDY02026 Canola plasma membrane 41.35 46.35
CDX84861 Canola plasma membrane 41.1 46.13
CDY24033 Canola plasma membrane 40.85 45.92
CDY43004 Canola plasma membrane 44.11 45.3
CDY28663 Canola plasma membrane 43.11 44.68
CDY11599 Canola plasma membrane 43.48 44.2
CDY06982 Canola plasma membrane 42.36 43.56
CDX93172 Canola cytosol, golgi, plasma membrane 42.36 43.5
CDX67610 Canola cytosol, peroxisome, plasma membrane 38.85 41.5
CDY57658 Canola plasma membrane 36.47 41.28
CDY07520 Canola cytosol, peroxisome, plasma membrane 40.1 40.82
CDY44124 Canola plasma membrane 39.72 40.54
CDX68987 Canola cytosol, nucleus, plasma membrane 42.48 39.88
CDX75364 Canola cytosol, nucleus, plasma membrane 42.48 39.6
CDX81125 Canola cytosol, nucleus, plasma membrane 41.98 38.77
CDY54954 Canola cytosol, peroxisome, plasma membrane 43.61 38.71
CDX78358 Canola cytosol, nucleus, plasma membrane 41.85 38.66
CDY03756 Canola cytosol 3.26 38.24
CDY24518 Canola cytosol, peroxisome, plasma membrane 43.48 36.34
CDY23894 Canola cytosol, golgi, plasma membrane 42.73 26.77
CDX85579 Canola plasma membrane 44.99 25.07
CDX91017 Canola plasma membrane 45.49 23.79
Protein Annotations
EnsemblPlants:CDY01623EnsemblPlantsGene:GSBRNA2T00112679001GO:A0A078EQ54GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0009987GO:GO:0015079GO:GO:0016020GO:GO:0071805
InterPro:K+_transporterPANTHER:PTHR30540PANTHER:PTHR30540:SF76PFAM:PF02705ProteinID:CDY01623ProteinID:CDY01623.1
SEG:segTIGRFAMs:TIGR00794TMHMM:TMhelixUniParc:UPI0004EF28D9MapMan:24.2.3.11:
Description
BnaC07g36130D
Coordinates
chrLK031927:+:1095956..1099417
Molecular Weight (calculated)
89554.6 Da
IEP (calculated)
6.965
GRAVY (calculated)
0.284
Length
798 amino acids
Sequence
(BLAST)
001: MAERVEASVT DGESTIEERD RELMREFEEG LDQPMDEEAD MLKDMHGEKS FSMLMLLRLS FQSLGIVYGD LGTSPLYVFY NTFPDGIDDS EDVIGALSLI
101: IYSLLLIPLI KYVFIVCKAN DNGQGGTLAI YSLLCRHANV NLIPNQQRSD EDLTTYSRTS VAEGSFAAKT KKWLESSHSK KRALLVIVLI GTCMMIGDGI
201: LTPAISVLSA TGGIRVNNPK MSSDIVVLVS VILLIGLFSM QHYGTDKVGW LFAPIVLIWF LFIGATGIYN ICKHDTSVLK AFSPKYIYLY FKRRGRDGWI
301: SLGGILLSIT GTEALFADIS YFPLQAIQLA FTLFVFPCLL LAYCGQAAFL VNHKEHYKDA FYASIPESVY WPMLIVATGA AIVGSQATIS GTYSIIKQAV
401: SHGCFPRVKI VHTSKKFLGQ IYCPDINWIL MIGCITVTAS FKNQTEIGNA YGTAVVVVML VTTLLMVLTM LLVWRRHWIF VLVFAILSLV VELSYFSAVI
501: LKVNEGGWVP LMIAAISLLV MFVWNYVTVK KYEFEVHSRV SMSWILGLGP SLGLVRVPGI GLIHSELASG VPRIFSHFIT NLPAIHSVVV FVCVKNLPVY
601: TVPEEERFLV KRIGPKTFRM FRCVARYGYK DLHRKDDDFE NKLFDNLFSF VQTETMMESD SNYSPYSFNH RQESRDELIR NNNNNHNKNM VMFSSMVDYT
701: ESAIVPADSP HSAMSFSQNY TVEEEEEDEL EFLKICKETG VVHIMGNTVV KARKGSLVPK KIAINYVYRF LAKMCRANSA ILHVPHEALL NVGQICYV
Best Arabidopsis Sequence Match ( AT4G19960.2 )
(BLAST)
001: MAERVEASSV PEGENTIEER EVGAMWELEQ KLDQPMDEEA NKLNNMYREK GLSMLMLLRL SFQSLGIVYG DLGTSPLYVF YNTFPDGIDD SEDVIGALSL
101: IIYSLLLIPL IKYVFIVCKA NDNGQGGTLA IYSLLCRHAK VKLIPNQHRS DEDLTTYSRT VSAEGSFAAK TKKWLEGKEW RKRALLVVVL LGTCMMIGDG
201: ILTPAISVLS ATGGIKVNNP KMSGDIVVLV AIVILIGLFS MQHYGTDKVG WLFAPIVLIW FLFIGATGMY NICKYDTSVL KAFSPTYIYL YFKRRGRDGW
301: ISLGGILLSI TGTEALYADI AYFPLLAIQL AFTFFVFPCL LLAYCGQAAY LVIHKEHYQD AFYASIPDSV YWPMFIVATG AAIVGSQATI SGTYSIVKQA
401: VAHGCFPRVK IVHTSKKFLG QIYCPDINWI LMLGCIAVTA SFKKQSQIGN AYGTAVVLVM LVTTLLMVLI MLLVWHCHWI LVLIFTFLSF FVELSYFSAV
501: IFKIDEGGWV PLIIAAISLL VMSVWHYATV KKYEFEMHSK VSMSWILGLG PSLGLVRVPG IGLVYTELAS GVPHIFSHFI TNLPAIHSVV VFVCVKYLPV
601: YTVPEEERFL VKRIGPKTFR MFRCVARYGY KDLHKKDDDF ENKLLTKLSS FIRIETMMEP TSNSSTYSST YSVNHTQDST VDLIHNNNNH NHNNNMDMFS
701: SMVDYTVSTL DTIVSAESLH NTVSFSQDNT VEEEETDELE FLKTCKESGV VHIMGNTVVK ARTGSWLPKK IAIDYVYAFL AKICRANSVI LHVPHETLLN
801: VGQVFYV
Arabidopsis Description
KUP9K+ uptake permease 9 [Source:TAIR;Acc:AT4G19960]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.