Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plasma membrane 4
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, plasma membrane
BaCelLo:nucleus
MultiLoc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX70151
CDX98843
CDY04950
CDY52149

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G70300.1 CDX70151 AT5G05410.1 18552202
AT1G70300.1 CDX98843 AT5G05410.1 18552202
AT1G70300.1 CDY04950 AT5G05410.1 18552202
AT1G70300.1 CDY52149 AT5G05410.1 18552202
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY03756 Canola cytosol 9.43 97.06
CDY03755 Canola plasma membrane 84.86 89.32
Bra016225.1-P Field mustard cytosol, plasma membrane, vacuole 99.86 89.27
CDY11599 Canola plasma membrane 98.71 88.03
CDY43004 Canola plasma membrane 94.71 85.33
AT1G70300.1 Thale cress plasma membrane 91.29 81.71
GSMUA_Achr7P20040_001 Banana plasma membrane 71.86 73.32
GSMUA_Achr9P22670_001 Banana cytosol, peroxisome, plasma membrane 74.86 73.18
VIT_01s0026g00270.t01 Wine grape plasma membrane 81.29 73.14
GSMUA_Achr3P06140_001 Banana plasma membrane 73.29 71.85
Solyc05g005740.2.1 Tomato cytosol, plasma membrane, vacuole 79.57 71.5
PGSC0003DMT400010525 Potato plasma membrane 79.29 71.25
KRH74619 Soybean plasma membrane 77.86 69.16
Solyc04g025880.2.1 Tomato plasma membrane 76.43 69.03
KRH45700 Soybean plasma membrane 76.29 68.11
KRG99315 Soybean plasma membrane 75.57 67.82
KRH69531 Soybean plasma membrane 71.43 67.02
Os02t0730300-01 Rice plasma membrane 72.71 66.1
Zm00001d017925_P004 Maize plasma membrane 72.29 65.46
PGSC0003DMT400035889 Potato plasma membrane 46.14 65.38
KXG30825 Sorghum plasma membrane 72.29 65.37
Zm00001d051756_P004 Maize plasma membrane 71.71 65.36
TraesCS7D01G211800.1 Wheat plasma membrane 71.71 65.11
TraesCS7B01G116700.2 Wheat plasma membrane 71.71 65.11
TraesCS7A01G209900.1 Wheat plasma membrane 71.57 64.9
TraesCS6B01G322300.3 Wheat plasma membrane 70.57 64.32
TraesCS6D01G273100.1 Wheat plasma membrane 70.57 64.32
TraesCS6A01G291900.2 Wheat plasma membrane 70.29 63.98
Os06t0270200-00 Rice plasma membrane 69.71 63.38
EER89587 Sorghum plasma membrane 69.57 63.0
Zm00001d037305_P001 Maize plasma membrane 69.14 62.94
GSMUA_Achr1P09670_001 Banana plasma membrane 61.0 62.89
HORVU6Hr1G073030.13 Barley plasma membrane, vacuole 70.57 62.69
EER90068 Sorghum peroxisome 72.86 62.2
TraesCS7B01G295600.2 Wheat plasma membrane 73.29 62.18
TraesCS7D01G388900.2 Wheat plasma membrane 73.29 62.03
TraesCS7A01G393600.1 Wheat plasma membrane 73.29 61.88
Zm00001d046679_P002 Maize plasma membrane 72.57 61.8
Os06t0625900-01 Rice vacuole 73.29 60.85
HORVU7Hr1G042800.11 Barley mitochondrion, plasma membrane 67.14 60.26
CDX93172 Canola cytosol, golgi, plasma membrane 66.57 59.97
CDY06982 Canola plasma membrane 66.29 59.79
HORVU7Hr1G092940.2 Barley plastid 73.43 58.21
CDY24033 Canola plasma membrane 57.29 56.48
CDX84861 Canola plasma membrane 57.29 56.4
Zm00001d036784_P002 Maize plasma membrane 68.0 56.33
CDY02026 Canola plasma membrane 57.14 56.18
CDY10706 Canola plasma membrane 57.14 56.02
CDY28663 Canola plasma membrane 55.86 50.78
CDX84264 Canola cytosol, peroxisome, plasma membrane 49.71 47.8
CDY44124 Canola plasma membrane 52.14 46.68
CDY27164 Canola cytosol, peroxisome, plasma membrane 50.29 46.5
CDY57658 Canola plasma membrane 46.57 46.24
HORVU7Hr1G053250.1 Barley cytosol 13.71 45.71
CDY12441 Canola plasma membrane 50.43 44.46
CDY31662 Canola cytosol, peroxisome, plasma membrane 49.86 44.35
CDY51891 Canola cytosol, peroxisome, plasma membrane 48.71 43.16
CDY01623 Canola cytosol, peroxisome, plasma membrane 49.14 43.11
CDX98647 Canola cytosol, peroxisome, plasma membrane 48.86 42.33
CDY53008 Canola cytosol, peroxisome, plasma membrane 48.29 42.04
CDX98648 Canola cytosol 48.43 41.85
CDY64551 Canola cytosol, peroxisome, plasma membrane 48.29 41.83
CDX78964 Canola cytosol, peroxisome, plasma membrane 48.43 41.75
CDY65345 Canola plasma membrane 46.43 40.93
CDY01618 Canola cytosol, peroxisome, plasma membrane 40.71 40.2
CDX67610 Canola cytosol, peroxisome, plasma membrane 42.14 39.49
CDY07520 Canola cytosol, peroxisome, plasma membrane 42.86 38.27
CDX85579 Canola plasma membrane 78.14 38.2
CDY54954 Canola cytosol, peroxisome, plasma membrane 48.14 37.49
CDY23894 Canola cytosol, golgi, plasma membrane 67.0 36.81
CDX91017 Canola plasma membrane 78.29 35.91
CDY24518 Canola cytosol, peroxisome, plasma membrane 48.14 35.29
CDX68987 Canola cytosol, nucleus, plasma membrane 41.86 34.47
CDX75364 Canola cytosol, nucleus, plasma membrane 41.43 33.88
CDX78358 Canola cytosol, nucleus, plasma membrane 41.43 33.56
CDX81125 Canola cytosol, nucleus, plasma membrane 41.43 33.56
CDY65138 Canola cytosol 3.43 23.3
Protein Annotations
MapMan:24.2.3.11GO:A0A078J4W6UniProt:A0A078J4W6EnsemblPlants:CDY57844ProteinID:CDY57844ProteinID:CDY57844.1
GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0006811GO:GO:0006813
GO:GO:0008150GO:GO:0009987GO:GO:0015079GO:GO:0016020GO:GO:0016021GO:GO:0071805
EnsemblPlantsGene:GSBRNA2T00022750001InterPro:K+_transporterPFAM:PF02705PANTHER:PTHR30540PANTHER:PTHR30540:SF10TIGRFAMs:TIGR00794
TMHMM:TMhelixUniParc:UPI0004EEC9C7SEG:seg:::
Description
BnaA07g38760DPotassium transporter [Source:UniProtKB/TrEMBL;Acc:A0A078J4W6]
Coordinates
chrLK033610:-:765..4156
Molecular Weight (calculated)
78232.5 Da
IEP (calculated)
8.726
GRAVY (calculated)
0.414
Length
700 amino acids
Sequence
(BLAST)
001: MDIESRTYQN TVKKESWRTV LTLAYQSLGV VYGDLSISPL YVFKSTFAED IEHSDSNDEI FGVLSFIFWT ITLVPLFKYV FIVLRADDNG EGGTFALYSL
101: LCRHARVNSL PSCQLADEQL TEYKTESPLE MGPRSGFAAR LKSTLEKRRV LQKVLLVLAL IGTCMVIGDG VLTPAISVFS AVSGVELSTA KEHHKYIEVP
201: AACVILIGLF ALQHYGTHRV GFLFAPVILL WLMCISAIGV YNIFHWNPHV YQALSPYYMY KFLKKTQSKG WMSLGGILLC ITGSEAMFAD LGHFSQLSIK
301: IAFTSLVYPS LILAYMGQAA YLSQHHVIDT SYNIGFYVSV PEKLRWPVLV IAILAAVVGS QAIITGTFSI IKQCSALGCF PKVKIVHTSS KIHGQIYIPE
401: INWLLMVLCL AVTIGFRDTK RLGNASGLAV ITVMLVTTCL MSLVIVLCWH KNILFAIAFV VFFGTIESLY FTASLIKFLE GAWVPVALSL CFLAAMCTWH
501: YGTLKRYEFD VQNKVSVNWL LSLGQTLGIK RVRGVGLIHT ELVSGVPAIF SHFVTNLPAF HQVLVFLCVK SVPVPHVRPE ERFLVGRVGP KQYRMYRCIV
601: RYGYRDVHKD DIEFEGDLVC SIAEFKETRE ELMELTEARE GGVAYIMGNA YMRAKHGSGL VKRVAINVGY EFLRRNTRGP RTALTSPHAS TLEVGMIYHV
Best Arabidopsis Sequence Match ( AT1G70300.1 )
(BLAST)
001: MEIESGSYQN AKKESWRTVL TLAYQSLGVV YGDLSISPLY VYKSTFAEDI HHSESNEEIF GVLSFIFWTI TLVPLLKYVF IVLRADDNGE GGTFALYSLL
101: CRHARVNSLP SCQLADEQLI EYKTDSIGSS SMPQSGFAAS LKSTLEKHGV LQKILLVLAL IGTCMVIGDG VLTPAISVFS AVSGVELSMS KEHHKYIELP
201: AACVILIGLF ALQHYGTHRV GFLFAPVILL WLMCISAIGV YNIFHWNPHV YQALSPYYMY KFLKKTQSRG WMSLGGILLC ITGSEAMFAD LGHFSQLSIK
301: IAFTSLVYPS LILAYMGQAA YLSQHHIIES EYNIGFYVSV PERLRWPVLV IAILAAVVGS QAIITGTFSI IKQCSALGCF PKVKIVHTSS KIHGQIYIPE
401: INWILMVLCL AVTIGFRDTK RLGNASGLAV ITVMLVTTCL MSLVIVLCWH KSVIFAIVFV VFFGTIESLY FSASLIKFLE GAWVPIALAF CFLLAMCTWH
501: YGTLKRYEYD VQNKVSVNWL LSLSQTLGIA RVRGLGLIHT ELVSGVPAIF SHFVTNLPAF HQVLVFLCVK SVPVPHVRPQ ERFLVGRIGP KEFRIYRCIV
601: RFGYRDVHKD DFEFEGDLVC SIAEFIRTEA ETAATAAETN GEDDDRMSVV GTCSTYMQGI EDHYESDIDD PDKPGTSEIR SPKPKKKSKS KVKKRVRFVV
701: PETPKIEKET RQELMELTEA REGGVAYIMG NAYMKAKPGS GLLKRLAINI GYEFLRRNTR GPRNMLTSPH ASTLEVGMIY NV
Arabidopsis Description
POT6Potassium transporter 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8W4I4]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.