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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus, plasma membrane
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX98647 Canola cytosol, peroxisome, plasma membrane 88.64 88.86
CDY01623 Canola cytosol, peroxisome, plasma membrane 87.28 88.6
CDY64551 Canola cytosol, peroxisome, plasma membrane 84.57 84.78
CDY53008 Canola cytosol, peroxisome, plasma membrane 83.7 84.33
CDY51891 Canola cytosol, peroxisome, plasma membrane 81.36 83.42
CDX78964 Canola cytosol, peroxisome, plasma membrane 82.84 82.64
CDY01618 Canola cytosol, peroxisome, plasma membrane 71.48 81.66
AT4G19960.3 Thale cress cytosol, peroxisome, plasma membrane 83.83 81.51
CDY65345 Canola plasma membrane 72.59 74.06
CDX84264 Canola cytosol, peroxisome, plasma membrane 64.94 72.25
CDY27164 Canola cytosol, peroxisome, plasma membrane 65.31 69.88
GSMUA_Achr2P02640_001 Banana plasma membrane 48.02 68.85
VIT_01s0011g01510.t01 Wine grape plasma membrane 66.91 68.61
CDY31662 Canola cytosol, peroxisome, plasma membrane 66.3 68.23
PGSC0003DMT400046034 Potato plasma membrane 65.8 67.98
Solyc02g031840.2.1 Tomato plasma membrane 65.68 67.86
KRH12204 Soybean plasma membrane 62.72 67.82
CDY12441 Canola plasma membrane 66.17 67.51
KRH58500 Soybean plasma membrane 65.8 67.38
Solyc02g068590.2.1 Tomato peroxisome, plasma membrane, vacuole 65.8 67.21
GSMUA_Achr11P... Banana mitochondrion, plasma membrane 64.57 67.05
PGSC0003DMT400027038 Potato peroxisome, plasma membrane, vacuole 65.56 67.05
KRH37223 Soybean plasma membrane 65.31 66.96
Os08t0206400-01 Rice cytosol, golgi, nucleus 10.86 66.67
GSMUA_Achr5P00220_001 Banana plasma membrane 63.09 66.54
Os04t0613900-01 Rice plasma membrane 64.2 65.74
KRH42381 Soybean plasma membrane 65.68 64.88
HORVU2Hr1G098940.4 Barley plasma membrane 62.96 64.39
TraesCS5A01G366100.1 Wheat peroxisome 62.22 64.2
TraesCS2D01G419000.2 Wheat plasma membrane 62.72 64.14
TraesCS2B01G441100.1 Wheat plasma membrane 62.72 64.14
TraesCS5B01G368500.1 Wheat peroxisome 62.1 64.08
TraesCS2A01G422600.1 Wheat plasma membrane 62.59 64.02
EER98483 Sorghum plasma membrane 61.85 63.66
TraesCS5D01G375700.1 Wheat peroxisome 61.6 63.57
OQU80069 Sorghum plasma membrane 61.98 63.54
EES12852 Sorghum plasma membrane 62.72 63.11
TraesCS1A01G047200.2 Wheat plasma membrane 61.36 62.91
Zm00001d024300_P003 Maize plasma membrane 62.1 62.88
TraesCS1D01G048200.2 Wheat plasma membrane 61.11 62.66
TraesCS1B01G061200.3 Wheat plasma membrane 60.49 62.58
Zm00001d026289_P004 Maize plasma membrane 62.59 62.28
Os09t0563200-01 Rice plasma membrane 60.86 62.17
GSMUA_Achr4P33190_001 Banana plasma membrane 57.41 62.0
GSMUA_Achr8P33490_001 Banana plasma membrane 60.12 61.96
HORVU5Hr1G090010.6 Barley plasma membrane 61.6 61.91
Zm00001d019631_P003 Maize plasma membrane 61.48 61.33
HORVU1Hr1G009100.7 Barley plasma membrane 60.86 61.09
Zm00001d002333_P003 Maize plasma membrane 62.22 58.67
CDY65138 Canola cytosol 7.16 56.31
CDY57844 Canola plasma membrane 41.85 48.43
CDY03755 Canola plasma membrane 39.26 47.82
CDY02026 Canola plasma membrane 41.11 46.77
CDY10706 Canola plasma membrane 40.99 46.5
CDX84861 Canola plasma membrane 40.62 46.27
CDY24033 Canola plasma membrane 40.37 46.06
CDY28663 Canola plasma membrane 42.72 44.94
CDY06982 Canola plasma membrane 42.47 44.33
CDY43004 Canola plasma membrane 42.47 44.27
CDX93172 Canola cytosol, golgi, plasma membrane 42.35 44.14
CDY11599 Canola plasma membrane 42.22 43.57
CDX67610 Canola cytosol, peroxisome, plasma membrane 38.77 42.03
CDY07520 Canola cytosol, peroxisome, plasma membrane 39.75 41.07
CDY57658 Canola plasma membrane 35.56 40.85
CDY44124 Canola plasma membrane 38.77 40.15
CDX68987 Canola cytosol, nucleus, plasma membrane 41.6 39.65
CDX75364 Canola cytosol, nucleus, plasma membrane 41.48 39.25
CDY54954 Canola cytosol, peroxisome, plasma membrane 43.33 39.04
CDX81125 Canola cytosol, nucleus, plasma membrane 40.37 37.85
CDX78358 Canola cytosol, nucleus, plasma membrane 40.25 37.73
CDY03756 Canola cytosol 3.09 36.76
CDY24518 Canola cytosol, peroxisome, plasma membrane 43.21 36.65
CDY23894 Canola cytosol, golgi, plasma membrane 42.59 27.08
CDX85579 Canola plasma membrane 43.7 24.72
CDX91017 Canola plasma membrane 44.2 23.46
Protein Annotations
EnsemblPlants:CDX98648EnsemblPlantsGene:GSBRNA2T00106700001GO:A0A078EH41GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0009987GO:GO:0015079GO:GO:0016020GO:GO:0071805
InterPro:K+_transporterPANTHER:PTHR30540PANTHER:PTHR30540:SF76PFAM:PF02705ProteinID:CDX98648ProteinID:CDX98648.1
SEG:segTIGRFAMs:TIGR00794TMHMM:TMhelixUniParc:UPI0004EF497BMapMan:24.2.3.11:
Description
BnaA03g44330D
Coordinates
chrLK031906:+:441769..445529
Molecular Weight (calculated)
91266.6 Da
IEP (calculated)
6.723
GRAVY (calculated)
0.273
Length
810 amino acids
Sequence
(BLAST)
001: MAGRVEASLT EGESTIEERY REAMREFEEG LDQPMDEEAN MLKNMNKEKG LSMLMLLRLS FQSLGIVYGD LGTSPLYVFY NTFPDGIDER EDVIGALSLI
101: IYSLLLIPLI KYVFIVCKAN DNGQAGGTLA IYSLLCRHAN VNLIPNQQRS DEDLSTYSRT LVAEGSFAAK TKKWLESRHS KKRALLVIVL LGTCMMIGDS
201: ILTPAISVLS ATGGIKVNNP KMSSDIAVFV SVVILIGLFS MQHYGTDKVG WLFAPIVLIW FLFIGATGIY NICKHDTSVL KAFSPKYIYL YFKRRGQDGW
301: ISLGGILLSI TGTEALYAEI SYFPLQVIQL AFTFFVFPCL LLAYCGQAAY LVNHKEHYQD AFYASIPESV YWPMFIAATG AAIVGSQATI SGTYSLIKQA
401: VSHGCFPRVK IVHTSKKFLA QIYCPDINWI LMIGCIAVTA SFKNQIDIGN AYGNSKLSNP YILYVFKIWT AVVIVMLVTT LLMVLTMLVV WRCHWILVLI
501: FALLSLVVEL SYFSAVLLKI NEGGWVPLII AAFSLLVMFV WNYVTVKKYE FEVHSRVSMS WILGLGPSLG LVRVPGIGLV HTELASGVPH IFSHFITNLP
601: AIHSVVVFVC VKNLPVYTVP EEERFLVKRI GPKTFRMFRC VARYGYKDLH RKDDRFEDKL FENLFSFIQN ETMMESDSNY SNSVYPVNYT QESRDELISN
701: NNNNHDSNDN NMVMFSSMVD YMDTMSFSQN NTVEEEEEED ELEFLKTCKE SGVVHIMGNT VVKARKGSLL PKKIAIDYIY AFLAKICREN SAILHVPHET
801: LLNVGQVYYL
Best Arabidopsis Sequence Match ( AT4G19960.1 )
(BLAST)
001: MAERVEASSV PEGENTIEER EVGAMWELEQ KLDQPMDEEA NKLNNMYREK GLSMLMLLRL SFQSLGIVYG DLGTSPLYVF YNTFPDGIDD SEDVIGALSL
101: IIYSLLLIPL IKYVFIVCKA NDNGQGGTLA IYSLLCRHAK VKLIPNQHRS DEDLTTYSRT VSAEGSFAAK TKKWLEGKEW RKRALLVVVL LGTCMMIGDG
201: ILTPAISVLS ATGGIKVNNP KMSGDIVVLV AIVILIGLFS MQHYGTDKVG WLFAPIVLIW FLFIGATGMY NICKYDTSVL KAFSPTYIYL YFKRRGRDGW
301: ISLGGILLSI TGTEALYADI AYFPLLAIQL AFTFFVFPCL LLAYCGQAAY LVIHKEHYQD AFYASIPDSV YWPMFIVATG AAIVGSQATI SGTYSIVKQA
401: VAHGCFPRVK IVHTSKKFLG QIYCPDINWI LMLGCIAVTA SFKKQSQIGN AYGKMTTTSK YKKNYFSQWT AVVLVMLVTT LLMVLIMLLV WHCHWILVLI
501: FTFLSFFVEL SYFSAVIFKI DEGGWVPLII AAISLLVMSV WHYATVKKYE FEMHSKVSMS WILGLGPSLG LVRVPGIGLV YTELASGVPH IFSHFITNLP
601: AIHSVVVFVC VKYLPVYTVP EEERFLVKRI GPKTFRMFRC VARYGYKDLH KKDDDFENKL LTKLSSFIRI ETMMEPTSNS STYSSTYSVN HTQDSTVDLI
701: HNNNNHNHNN NMDMFSSMVD YTVSTLDTIV SAESLHNTVS FSQDNTVEEE ETDELEFLKT CKESGVVHIM GNTVVKARTG SWLPKKIAID YVYAFLAKIC
801: RANSVILHVP HETLLNVGQV FYV
Arabidopsis Description
KUP9K+ uptake permease 9 [Source:TAIR;Acc:AT4G19960]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.