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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • cytosol 1
  • mitochondrion 1
  • plasma membrane 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d033067_P001 Maize plasma membrane 91.36 91.7
EER91310 Sorghum plasma membrane 83.09 82.37
TraesCS6B01G324800.1 Wheat peroxisome 78.15 78.93
TraesCS6D01G275100.1 Wheat peroxisome 78.02 78.51
TraesCS6A01G294200.1 Wheat peroxisome 78.02 78.41
Os03t0575200-01 Rice plasma membrane 77.16 77.07
KXG38125 Sorghum cytosol 67.04 65.58
EER91312 Sorghum cytosol, peroxisome, plasma membrane 64.69 64.37
KXG26179 Sorghum plasma membrane 53.09 54.57
EES10698 Sorghum cytosol, peroxisome, plasma membrane 51.98 53.43
OQU88287 Sorghum plasma membrane 61.11 53.17
EES10707 Sorghum plasma membrane 48.77 52.95
EES05152 Sorghum peroxisome 47.41 52.24
EES02013 Sorghum cytosol, peroxisome, plasma membrane 47.28 49.42
KXG34053 Sorghum cytosol, peroxisome, plasma membrane, plastid 46.17 48.26
VIT_01s0011g03020.t01 Wine grape cytosol, nucleus, plasma membrane 48.52 48.22
Solyc12g005670.1.1 Tomato cytosol, peroxisome, plasma membrane 46.17 47.58
Bra003195.1-P Field mustard plasma membrane 41.48 47.12
KRH69024 Soybean cytosol, peroxisome, plasma membrane 33.58 46.5
PGSC0003DMT400035722 Potato cytosol, peroxisome, plasma membrane 44.69 46.17
CDX67610 Canola cytosol, peroxisome, plasma membrane 42.47 46.05
GSMUA_Achr10P... Banana cytosol, peroxisome, plasma membrane 38.02 45.43
AT4G13420.1 Thale cress cytosol, peroxisome, plasma membrane 43.95 45.35
KRG97298 Soybean mitochondrion 44.44 45.23
KRH47652 Soybean cytosol, peroxisome, plasma membrane 44.81 45.15
CDY07520 Canola cytosol, peroxisome, plasma membrane 42.96 44.39
EER98483 Sorghum plasma membrane 37.28 38.37
OQU80069 Sorghum plasma membrane 37.16 38.1
EES12852 Sorghum plasma membrane 36.42 36.65
EER98827 Sorghum cytosol, peroxisome, plasma membrane 37.9 36.03
EER99908 Sorghum plasma membrane 34.57 35.35
EER99435 Sorghum plasma membrane 36.79 35.35
EER99886 Sorghum plasma membrane 34.2 35.15
OQU76859 Sorghum plasma membrane 33.7 35.04
KXG30825 Sorghum plasma membrane 33.33 34.88
EES02024 Sorghum plasma membrane 33.33 34.48
EER89587 Sorghum plasma membrane 32.84 34.41
KXG32509 Sorghum plasma membrane 33.83 33.79
EER90068 Sorghum peroxisome 33.95 33.54
EER94895 Sorghum plasma membrane 33.21 33.42
EES12835 Sorghum cytosol, nucleus, plasma membrane 33.33 31.69
Protein Annotations
MapMan:24.2.3.11UniProt:A0A1B6QJN2GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810
GO:GO:0006811GO:GO:0006813GO:GO:0008150GO:GO:0009987GO:GO:0015079GO:GO:0016020
GO:GO:0016021GO:GO:0071805InterPro:K+_transporterEnsemblPlants:KXG38128ProteinID:KXG38128ProteinID:KXG38128.1
PFAM:PF02705PANTHER:PTHR30540PANTHER:PTHR30540:SF23EnsemblPlantsGene:SORBI_3001G184100TIGRFAMs:TIGR00794TMHMM:TMhelix
UniParc:UPI0003C6F1DBSEG:seg::::
Description
hypothetical protein
Coordinates
chr1:+:15753968..15758644
Molecular Weight (calculated)
91660.2 Da
IEP (calculated)
8.566
GRAVY (calculated)
0.314
Length
810 amino acids
Sequence
(BLAST)
001: MAQQAGAGGG GGLEMVAHSG DLELELPPVN WPLRQDSLYR DATKPAHAAG HHHGRQESWA RTLRLAFQCV GIMYADLGTS PLYVYANTFK YGVKHEDDVL
101: GVLSIVIYSF VLFTMIKIVF IALYANDEGD GGTFALYSLI SRYAKICLIP NQQDEDELVL RYKNQAKPSA TRRRAQWMKN LLETSKAAKV LLFSLTILAT
201: ALAISDCMLN PPISVLAAVN GLKLKAPHRL TKDAEVWITV GILVALFSVQ RFGTDKIGYT FAPVVTVWLI LIGGIGIYNV IMYDIGTLRA FNPKYIVDYF
301: QRNKKKGWVS LGEILLCVTG TEALFADLGY FSIRSIQLSS TFGLLPSVLL TYIGQAAYLR KHMDMPDISN VFFNSVPSSL FWPTFILALI ASVIGSQAMI
401: SCAFATMSHL QALNCFPRVK ILRTSGHYWG QMYIPEVNIF LCISACLVTI SFKTTGFIAR AHEICVVLVM VITTFLMTIV MLLVWKVNIW WIVIFFMVFM
501: STELVYTAAV LYKFIHGPYL SLAMSAVLMT IMIVWHYVHV KRYKYELEHT VSRDKVKDIL EHQDLKRVPG FGLIYTELVQ GIPPIFPHLI EKIPTIHSVI
601: VFITVKHLPI PHVDVSERFL FRQVEPKELM VFRCVARYGY LDTLEMATEF VKILVEYLQY YIRDINLYAL GDPLRISNYS TRIDSFSREK PSGHAIYAEE
701: MLTPIQSFSE LTMHPVGMSN ILTHLQTGKL NVEEMIKIEE DQNMVEREVD NGVVYILGET EVVAKPHSNL LKKIIVNYIY SFLRKNSRNG EKMLSIPRGQ
801: LLKVGITYEI
Best Arabidopsis Sequence Match ( AT1G60160.1 )
(BLAST)
001: MEEIEEGSSN NSIRRVGTGS SDRRWVDGSE VDSETPLFSE IRDRDYSFGN LRRRLMKKPK RADSLDVEAM EIAGSHGHNL KDLSLLTTLG IAFQTLGVVY
101: GDMGTSPLYV FSDVFSKVPI RSEVDVLGAL SLVIYTIAVI PLAKYVFVVL KANDNGEGGT FALYSLICRY AKVNKLPNQQ PADEQISSFR LKLPTPELER
201: ALGIKEALET KGYLKTLLLL LVLMGTSMII GDGILTPAMS VMSAMSGLQG EVKGFGTNAL VMSSIVILVA LFSIQRFGTG KVGFLFAPVL ALWFFSLGAI
301: GIYNLLKYDF TVIRALNPFY IVLFFNKNSK QAWSALGGCV LCITGAEAMF ADLGHFSVRS IQMAFTCVVF PCLLLAYMGQ AAYLTKHPEA SARIFYDSVP
401: KSLFWPVFVI ATLAAMIASQ AMISATFSCV KQAMALGCFP RLKIIHTSKK RIGQIYIPVI NWFLMIMCIL VVSIFRSTTH IANAYGIAEV GVMMVSTVLV
501: TLVMLLIWQT NIFLALCFPL IFGSVETIYL LAVLTKILEG GWVPLVFATF FLTVMYIWNY GSVLKYQSEV RERISMDFMR ELGSTLGTIR IPGIGLLYNE
601: LVQGIPSIFG QFLLTLPAIH STIIFVCIKY VPVPVVPQEE RFLFRRVCPK DYHMFRCIAR YGYKDVRKED SRVFEQLLIE SLEKFLRCEA LEDALESTLN
701: DFDPDRVSVA SDTYTDDLMA PLIHRAKRSE PEQELDSEVL PSSSVGSSME EDPALEYELA ALREATDSGL TYLLAHGDVR AKKNSIFVKK LVINYFYAFL
801: RRNCRAGAAN LTVPHMNILQ AGMTYMV
Arabidopsis Description
POT12Putative potassium transporter 12 [Source:UniProtKB/Swiss-Prot;Acc:O80739]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.