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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plasma membrane 4
  • vacuole 2
  • extracellular 1
  • endoplasmic reticulum 1
  • golgi 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:mitochondrion, nucleus, secretory
BaCelLo:nucleus
MultiLoc:plasma membrane
Plant-mPloc:vacuole
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d022485_P001 Maize plasma membrane 93.65 93.54
Os07t0669650-01 Rice plasma membrane 30.71 89.63
TraesCS2B01G135900.1 Wheat plasma membrane 85.41 86.5
TraesCS2A01G116700.1 Wheat plasma membrane 85.41 86.5
TraesCS2D01G118400.2 Wheat plasma membrane 85.15 86.25
HORVU2Hr1G020220.19 Barley plasma membrane 84.52 84.84
GSMUA_Achr10P... Banana plasma membrane 52.66 79.2
GSMUA_Achr5P08010_001 Banana plasma membrane 69.8 77.68
GSMUA_Achr11P... Banana plasma membrane 70.69 76.2
EES02024 Sorghum plasma membrane 73.22 73.69
GSMUA_Achr8P10010_001 Banana plasma membrane 67.64 73.01
KXG32509 Sorghum plasma membrane 66.24 64.36
KRH59991 Soybean plasma membrane 60.15 60.0
CDY57658 Canola plasma membrane 53.3 59.57
KRH41260 Soybean plasma membrane 59.64 59.42
VIT_02s0025g00680.t01 Wine grape plasma membrane 60.15 59.32
Bra013718.1-P Field mustard plasma membrane 57.99 58.97
CDY44124 Canola plasma membrane 58.12 58.57
KXG30825 Sorghum plasma membrane 52.41 53.36
EER89587 Sorghum plasma membrane 51.52 52.52
EER94895 Sorghum plasma membrane 53.3 52.17
EER99908 Sorghum plasma membrane 52.16 51.89
OQU76859 Sorghum plasma membrane 50.51 51.09
EER90068 Sorghum peroxisome 51.65 49.63
OQU80069 Sorghum plasma membrane 46.7 46.58
EES12852 Sorghum plasma membrane 46.57 45.59
EER98483 Sorghum plasma membrane 45.05 45.11
EER98827 Sorghum cytosol, peroxisome, plasma membrane 45.05 41.67
EES02013 Sorghum cytosol, peroxisome, plasma membrane 40.86 41.55
KXG34053 Sorghum cytosol, peroxisome, plasma membrane, plastid 40.36 41.03
EES05152 Sorghum peroxisome 36.8 39.46
EER99435 Sorghum plasma membrane 41.88 39.15
EES10707 Sorghum plasma membrane 37.06 39.14
KXG26179 Sorghum plasma membrane 39.09 39.09
EES10698 Sorghum cytosol, peroxisome, plasma membrane 37.69 37.69
EER91312 Sorghum cytosol, peroxisome, plasma membrane 38.32 37.1
KXG38125 Sorghum cytosol 38.2 36.35
EES12835 Sorghum cytosol, nucleus, plasma membrane 37.69 34.86
KXG38128 Sorghum plasma membrane 35.15 34.2
EER91310 Sorghum plasma membrane 35.28 34.03
OQU88287 Sorghum plasma membrane 37.94 32.12
Protein Annotations
MapMan:24.2.3.11EntrezGene:8074423UniProt:C5X4X4EnsemblPlants:EER99886ProteinID:EER99886ProteinID:EER99886.1
GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0006811GO:GO:0006813
GO:GO:0008150GO:GO:0009987GO:GO:0015079GO:GO:0016020GO:GO:0016021GO:GO:0071805
InterPro:K+_transporterPFAM:PF02705PANTHER:PTHR30540PANTHER:PTHR30540:SF77EnsemblPlantsGene:SORBI_3002G411500unigene:Sbi.20965
TIGRFAMs:TIGR00794TMHMM:TMhelixUniParc:UPI0001A847DBRefSeq:XP_002463365.1SEG:seg:
Description
hypothetical protein
Coordinates
chr2:-:75976742..75982887
Molecular Weight (calculated)
87724.6 Da
IEP (calculated)
8.649
GRAVY (calculated)
0.413
Length
788 amino acids
Sequence
(BLAST)
001: MDEEVGAAGR QQVQWKSYCR TLSLLAFQSF GVVYGDLSTS PLYVYRNSLS GRLNDYLDET TIFGLFSLVF WTFTLIPLLK YVIIVLSADD NGEGGTFALY
101: SLLCRHAKFS LLPNQQAADE ELSTYYHPGT DRTVVSSPFK RFLEKHRKLR TCLLLFVLFG ACMVIGDGVL TPTISVLSAI SGLQDPATSG LGDGWIVLIA
201: CVVLVGLFAL QHRGTHRVAF LFAPIVVFWL LSIGIIGLYN IIHWNPRIFV ALSPHYIVKF FNRTGKDGWI SLGGVLLAIT GTEAMFADLG HFSAASIRLA
301: FAGVIYPCLV LQYMGQAAFL SKNIPAVHNS FYLSIPSALF WPMFVIATLA AIVGSQAIIS ATFSIVKQCL ALGCFPRVKV VHTSRWIYGQ IYIPEINWIM
401: MVLCLAATLG FRDITVIGNA YGLACITVMF VTTCLMSLVI IFVWQKNLLI SLLFLVFFGA LEAAYLSAAV MKVPQGGWGP IALSAVFMSI MYAWHYGTRR
501: KYQFDLQNKV SMKWILNLGP SLGIMRVPGI GLIYTELVTG VPAIFSHFVT NLPAFHQVLV FVCVKSVPVP YVPMDERYLI GRIGPREYRM YRCIVRYGYK
601: DVQKDDENFE NHLVMSIARF IQMEAEESAS SAGSYESSPE GRMAVVHTTD TTGTGLVVRD SSVDAAGTSL PLTRSSKSET LRSLQSIYEL ESVGGVSRRR
701: RVRFQIDEEE RIDPQVRDEL SDLLEAKEAG VAYIIGHSYV KARKNSNFLK TFAINYAYSF LRKNCRGPSV TLHIPHISLI EVGMIYYV
Best Arabidopsis Sequence Match ( AT3G02050.1 )
(BLAST)
001: MAPAESGVSP RRNPSQLSWM NLSSNLILAY QSFGVVYGDL STSPLYVFPS TFIGKLHKHH NEDAVFGAFS LIFWTLTLIP LLKYLLVLLS ADDNGEGGTF
101: ALYSLLCRHA KLSLLPNQQA ADEELSAYKF GPSTDTVTSS PFRTFLEKHK RLRTALLLVV LFGAAMVIGD GVLTPALSVL SSLSGLQATE KNVTDGELLV
201: LACVILVGLF ALQHCGTHRV AFMFAPIVII WLISIFFIGL YNIIRWNPKI IHAVSPLYII KFFRVTGQDG WISLGGVLLS VTGTEAMFAN LGHFTSVSIR
301: VAFAVVVYPC LVVQYMGQAA FLSKNLGSIP NSFYDSVPDP VFWPVFVIAT LAAIVGSQAV ITTTFSIIKQ CHALGCFPRI KVVHTSKHIY GQIYIPEINW
401: ILMILTLAMA IGFRDTTLIG NAYGIACMVV MFITTFFMAL VIVVVWQKSC FLAALFLGTL WIIEGVYLSA ALMKVTEGGW VPFVLTFIFM IAMYVWHYGT
501: RRKYSFDLHN KVSLKWLLGL GPSLGIVRVP GIGLVYSELA TGVPAIFSHF VTNLPAFHKV VVFVCVKSVP VPHVSPEERF LIGRVCPKPY RMYRCIVRYG
601: YKDIQREDGD FENQLVQSIA EFIQMEASDL QSSASESQSN DGRMAVLSSQ KSLSNSILTV SEVEEIDYAD PTIQSSKSMT LQSLRSVYED EYPQGQVRRR
701: HVRFQLTASS GGMGSSVREE LMDLIRAKEA GVAYIMGHSY VKSRKSSSWL KKMAIDIGYS FLRKNCRGPA VALNIPHISL IEVGMIYYV
Arabidopsis Description
POT4Potassium transporter 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LD18]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.