Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, peroxisome, golgi, plastid
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 1
- golgi 1
- peroxisome 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G067100.1 | Wheat | golgi | 71.23 | 73.45 |
| KXG30414 | Sorghum | mitochondrion | 71.99 | 72.98 |
| TraesCS5B01G074000.1 | Wheat | cytosol, golgi, peroxisome | 70.18 | 72.59 |
| Zm00001d016806_P001 | Maize | golgi | 68.98 | 71.79 |
| TraesCS5D01G078300.1 | Wheat | golgi | 48.04 | 64.31 |
| Os05t0426400-01 | Rice | mitochondrion | 29.82 | 55.31 |
| Os01t0880200-01 | Rice | cytosol, golgi, peroxisome | 48.19 | 50.39 |
| Os03t0184300-02 | Rice | golgi | 35.39 | 38.27 |
| KRH43404 | Soybean | cytosol | 14.46 | 34.29 |
| Os02t0624400-01 | Rice | golgi | 13.55 | 16.45 |
| Os04t0553800-01 | Rice | cytosol, mitochondrion, plastid | 9.04 | 13.48 |
| Os10t0555100-01 | Rice | golgi, plasma membrane | 9.49 | 12.8 |
| Os04t0517400-01 | Rice | cytosol, plasma membrane | 3.16 | 7.09 |
Protein Annotations
| EnsemblPlants:Os02t0556000-00 | EnsemblPlantsGene:Os02g0556000 | Gene3D:3.90.550.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016740 |
| GO:GO:0016757 | InterPro:Glyco_trans_8 | InterPro:IPR029044 | InterPro:Nucleotide-diphossugar_trans | PANTHER:PTHR11183 | PANTHER:PTHR11183:SF58 |
| PFAM:PF01501 | ProteinID:BAS79213.1 | SEG:seg | SUPFAM:SSF53448 | UniParc:UPI0003939205 | UniProt:A0A0P0VKK0 |
| MapMan:21.2.2.1.2.1 | : | : | : | : | : |
Description
Similar to cDNA clone:J013112C08, full insert sequence. (Os02t0556000-00)
Coordinates
chr2:-:21014558..21019302
Molecular Weight (calculated)
73637.1 Da
IEP (calculated)
6.672
GRAVY (calculated)
-0.252
Length
664 amino acids
Sequence
(BLAST)
(BLAST)
001: MRGFACAHHA EKRHRLDRTL LSKRGYIGSY HYEKDAKYRP FSALLPEGSN PKMLYVKLVL IILMCGSFVS LLNSPSIHHN DDHHTESSAG VPRVSYEPDD
101: TRYVSDVTVD WPKISKAMQL VAGAEHGGGA RVALLNFDDG EVQQWRTALP QTAAAVARLE RAGSNVTWEH LYPEWIDEEE LYHAPTCPDL PEPAVDADGD
201: GEEVAVFDVV AVKLPCRRGG GWSKDVARLH LQLAAARLAA TRGRGGAAAH VLVVSASRCF PIPNLFRCRD EVAPRDGDVW LYRPDADALR RDLALPVGSC
301: RLAMPFSALA APHVAAASAP PPRREAYATI LHSEELYACG ALVAAQSIRM ASASGAPSEP ERDMVALVDE TISARHRGAL EAAGWKVRAI RRVRNPRAAA
401: DAYNEWNYSK FWLWSLTEYD RVVFLDADLL VQRPMSPLFA MPEVSATANH GTLFNSGVMV VEPCGCTLRL LMDHIADIDS YNGGDQGYLN EVFSWWHRLP
501: SHANFMKHFW EGDSGERLAA ARRAVLAAEP AVALAVHFVG MKPWFCFRDY DCNWNSPQLR QFASDEAHAR WWRAHDAMPA ALQGFCLLDE RQKALLRWDA
601: AEARAANFSD GHWRVPIADP RRNICATAAG DGEAAAACVE REIENRRVEG NRVTTSYAKL IDNF
101: TRYVSDVTVD WPKISKAMQL VAGAEHGGGA RVALLNFDDG EVQQWRTALP QTAAAVARLE RAGSNVTWEH LYPEWIDEEE LYHAPTCPDL PEPAVDADGD
201: GEEVAVFDVV AVKLPCRRGG GWSKDVARLH LQLAAARLAA TRGRGGAAAH VLVVSASRCF PIPNLFRCRD EVAPRDGDVW LYRPDADALR RDLALPVGSC
301: RLAMPFSALA APHVAAASAP PPRREAYATI LHSEELYACG ALVAAQSIRM ASASGAPSEP ERDMVALVDE TISARHRGAL EAAGWKVRAI RRVRNPRAAA
401: DAYNEWNYSK FWLWSLTEYD RVVFLDADLL VQRPMSPLFA MPEVSATANH GTLFNSGVMV VEPCGCTLRL LMDHIADIDS YNGGDQGYLN EVFSWWHRLP
501: SHANFMKHFW EGDSGERLAA ARRAVLAAEP AVALAVHFVG MKPWFCFRDY DCNWNSPQLR QFASDEAHAR WWRAHDAMPA ALQGFCLLDE RQKALLRWDA
601: AEARAANFSD GHWRVPIADP RRNICATAAG DGEAAAACVE REIENRRVEG NRVTTSYAKL IDNF
001: MANSPAAPAP TTTTGGDSRR RLSASIEAIC KRRFRRNSKG GGRSDMVKPF NIINFSTQDK NSSCCCFTKF QIVKLLLFIL LSATLFTIIY SPEAYHHSLS
101: HSSSRWIWRR QDPRYFSDLD INWDDVTKTL ENIEEGRTIG VLNFDSNEIQ RWREVSKSKD NGDEEKVVVL NLDYADKNVT WDALYPEWID EEQETEVPVC
201: PNIPNIKVPT RRLDLIVVKL PCRKEGNWSR DVGRLHLQLA AATVAASAKG FFRGHVFFVS RCFPIPNLFR CKDLVSRRGD VWLYKPNLDT LRDKLQLPVG
301: SCELSLPLGI QDRPSLGNPK REAYATILHS AHVYVCGAIA AAQSIRQSGS TRDLVILVDD NISGYHRSGL EAAGWQIRTI QRIRNPKAEK DAYNEWNYSK
401: FRLWQLTDYD KIIFIDADLL ILRNIDFLFS MPEISATGNN GTLFNSGVMV IEPCNCTFQL LMEHINEIES YNGGDQGYLN EVFTWWHRIP KHMNFLKHFW
501: IGDEDDAKRK KTELFGAEPP VLYVLHYLGM KPWLCYRDYD CNFNSDIFVE FATDIAHRKW WMVHDAMPQE LHQFCYLRSK QKAQLEYDRR QAEAANYADG
601: HWKIRVKDPR FKICIDKLCN WKSMLRHWGE SNWTDYESFV PTPPAITVDR RSSLPGHNL
101: HSSSRWIWRR QDPRYFSDLD INWDDVTKTL ENIEEGRTIG VLNFDSNEIQ RWREVSKSKD NGDEEKVVVL NLDYADKNVT WDALYPEWID EEQETEVPVC
201: PNIPNIKVPT RRLDLIVVKL PCRKEGNWSR DVGRLHLQLA AATVAASAKG FFRGHVFFVS RCFPIPNLFR CKDLVSRRGD VWLYKPNLDT LRDKLQLPVG
301: SCELSLPLGI QDRPSLGNPK REAYATILHS AHVYVCGAIA AAQSIRQSGS TRDLVILVDD NISGYHRSGL EAAGWQIRTI QRIRNPKAEK DAYNEWNYSK
401: FRLWQLTDYD KIIFIDADLL ILRNIDFLFS MPEISATGNN GTLFNSGVMV IEPCNCTFQL LMEHINEIES YNGGDQGYLN EVFTWWHRIP KHMNFLKHFW
501: IGDEDDAKRK KTELFGAEPP VLYVLHYLGM KPWLCYRDYD CNFNSDIFVE FATDIAHRKW WMVHDAMPQE LHQFCYLRSK QKAQLEYDRR QAEAANYADG
601: HWKIRVKDPR FKICIDKLCN WKSMLRHWGE SNWTDYESFV PTPPAITVDR RSSLPGHNL
Arabidopsis Description
GUX1UDP-glucuronate:xylan alpha-glucuronosyltransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LSB1]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.