Factsheet for Os04t0517400-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, cytosol

Predictor Summary:

nucleus 1
cytosol 1
plasma membrane 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plasma membrane
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G089320.8	Barley	cytosol	77.7	47.82
Zm00001d025865_P001	Maize	plasma membrane	78.04	43.1
EES11117	Sorghum	plasma membrane	78.04	43.1
TraesCS2A01G381700.1	Wheat	plasma membrane	78.38	42.88
TraesCS2D01G378200.1	Wheat	plasma membrane	77.7	42.59
TraesCS2B01G399000.1	Wheat	plasma membrane	77.36	42.41
Os02t0624400-01	Rice	golgi	75.34	40.77
GSMUA_Achr5P18580_001	Banana	plasma membrane	58.11	31.44
GSMUA_Achr11P...	Banana	plasma membrane	55.41	30.54
Solyc04g009920.2.1	Tomato	golgi	52.36	29.08
PGSC0003DMT400029873	Potato	plasma membrane	52.03	28.89
VIT_14s0036g00430.t01	Wine grape	golgi	52.36	28.39
Solyc05g055040.2.1	Tomato	plasma membrane	50.68	28.14
PGSC0003DMT400060425	Potato	plasma membrane	50.34	27.95
KRH34122	Soybean	plasma membrane	46.96	26.94
Bra006462.1-P	Field mustard	plasma membrane	47.97	26.54
KRH68773	Soybean	endoplasmic reticulum	49.32	26.5
KRG97021	Soybean	endoplasmic reticulum	48.99	26.32
KRG92718	Soybean	endoplasmic reticulum	47.3	25.88
Bra040140.1-P	Field mustard	extracellular, golgi, plasma membrane	47.64	25.82
CDY29996	Canola	extracellular, plasma membrane	47.64	25.82
CDX88935	Canola	plasma membrane	46.28	25.66
CDY21129	Canola	extracellular, golgi, plasma membrane	47.3	25.64
AT5G18480.1	Thale cress	golgi	46.28	25.51
CDX70822	Canola	plasma membrane	45.27	25.19
CDY58112	Canola	plasma membrane	44.93	25.09
CDY02625	Canola	plasma membrane	44.59	24.77
Bra023678.1-P	Field mustard	plasma membrane	43.92	24.39
Os04t0553800-01	Rice	cytosol, mitochondrion, plastid	11.82	7.87
Os10t0555100-01	Rice	golgi, plasma membrane	12.5	7.52
Os05t0426400-01	Rice	mitochondrion	8.78	7.26
Os01t0880200-01	Rice	cytosol, golgi, peroxisome	9.46	4.41
Os03t0184300-02	Rice	golgi	7.43	3.58
Os02t0556000-00	Rice	golgi, mitochondrion, peroxisome, plastid	7.09	3.16

Protein Annotations

EnsemblPlants:Os04t0517400-01	EnsemblPlantsGene:Os04g0517400	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	PANTHER:PTHR11183
PANTHER:PTHR11183:SF65	ProteinID:BAS90096.1	SEG:seg	TMHMM:TMhelix	UniParc:UPI0003939E98	UniProt:A0A0P0WCQ3
MapMan:35.1	:	:	:	:	:

Description

Similar to Plant glycogenin-like starch initiation protein (Fragment). (Os04t0517400-01)

Coordinates

chr4:+:25863742..25865878

Molecular Weight (calculated)

33336.5 Da

IEP (calculated)

8.465

GRAVY (calculated)

0.252

Length

296 amino acids

Sequence
(BLAST)

001: WMVDEKELRV IHYTLGPLKP WDWWTAWLVK PVGVWQDVRQ TLEESLPGTG GGRSPHDQLV VKVLFILPVL LLTCGYNQSC FQTNKELLNI RSLCAFARRD
101: RYKYKSEEAF PSYSVMGVSS SAFSNSNQRF SNGMHSKLPS YFGALTVLAC FMSAGVSFAF AFAIIPKQIM PWTGLLLMFE WTFVSFFLLF GSYLRFVYRW
201: GSLDANHVGH SRFDSSENHM VTGRHHNMSD CDIDATFYWT GMAIIAIVTV LLPTLLGVTA LFAKLGLMVA GGVVLASFMT YASEHIAISA FSRAER

Best Arabidopsis Sequence Match ( AT5G18480.1 )
(BLAST)

001: MVRLKTSLWV LLLALVSIQL NGSFGSESSK VAYVTLLYGD EFLLGVRVLG KSIRDTGSTK DMVALVSDGV SDYSKKLLKA DGWKVEKISL LANPNQVHPT
101: RFWGVYTKLK IFNMTDYKKV VYLDADTIVV KNIEDLFKCS KFCANLKHSE RLNSGVMVVE PSEALFNDMM RKVKTLSSYT GGDQGFLNSY YPDFPNARVF
201: DPSVTPEVLK TRPVPAMERL STLYNADVGL YMLANKWMVD DSKLHVIHYT LGPLKPWDWW TAWLVKPVDA WHSIRVKLEE TLPGTGGGSN QHDELVVKFL
301: FLLPLCALLF CIYRSIQGRE GSLCWSSFSN QIRYLYYKVR SNGTLGYGGV STMSPSYQPH SGNAQSKVPQ HLGAVSVVVC FTAVLLSLGI SFAIVPRQIM
401: PWTGLVLVYE WTFTIFFLLF GVFLLFVHQH GKRIAIQSES SSLDDSAKVH QRAGGSCDVT TLYYGLGMAF LAIAAVSLPY ILGITALFTR LGLMVGLAII
501: LAAFMTYASE HLAVRWFLKG LEDRRDTTRS NSLCFLC

Arabidopsis Description

IPUT1Inositol phosphorylceramide glucuronosyltransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8GWB7]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.