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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 8
  • golgi 6
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:golgi
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY58112 Canola plasma membrane 94.56 95.09
CDY02625 Canola plasma membrane 94.93 94.93
Bra006462.1-P Field mustard plasma membrane 89.31 88.97
AT5G18480.1 Thale cress golgi 84.05 83.43
Bra040140.1-P Field mustard extracellular, golgi, plasma membrane 77.3 75.46
KRG92718 Soybean endoplasmic reticulum 65.29 64.33
KRG97021 Soybean endoplasmic reticulum 66.23 64.07
VIT_14s0036g00430.t01 Wine grape golgi 65.48 63.92
KRH68773 Soybean endoplasmic reticulum 65.67 63.52
Solyc04g009920.2.1 Tomato golgi 63.23 63.23
Solyc05g055040.2.1 Tomato plasma membrane 62.66 62.66
PGSC0003DMT400029873 Potato plasma membrane 62.66 62.66
PGSC0003DMT400060425 Potato plasma membrane 61.91 61.91
GSMUA_Achr11P... Banana plasma membrane 60.98 60.52
GSMUA_Achr5P18580_001 Banana plasma membrane 61.73 60.15
KRH34122 Soybean plasma membrane 57.41 59.3
EES11117 Sorghum plasma membrane 56.85 56.53
Zm00001d025865_P001 Maize plasma membrane 56.66 56.34
Os02t0624400-01 Rice golgi 57.04 55.58
HORVU2Hr1G089320.8 Barley cytosol 50.09 55.51
TraesCS2B01G399000.1 Wheat plasma membrane 56.1 55.37
TraesCS6B01G257400.2 Wheat plasma membrane 49.72 55.21
TraesCS2A01G381700.1 Wheat plasma membrane 55.91 55.08
TraesCS2D01G378200.1 Wheat plasma membrane 55.72 55.0
TraesCS6D01G211500.1 Wheat plasma membrane 55.53 54.71
TraesCS6A01G223900.1 Wheat plasma membrane 54.6 53.79
HORVU6Hr1G058670.11 Barley endoplasmic reticulum, golgi 41.84 51.5
Os04t0517400-01 Rice cytosol, plasma membrane 24.39 43.92
Bra038490.1-P Field mustard plasma membrane 18.2 19.88
Bra005312.1-P Field mustard plasma membrane 17.64 19.03
Bra017301.1-P Field mustard plasma membrane 17.26 18.62
Bra031653.1-P Field mustard cytosol 16.89 17.05
Bra030750.1-P Field mustard plastid 16.7 16.92
Bra027954.1-P Field mustard golgi 17.07 16.73
Bra008292.1-P Field mustard extracellular, plasma membrane 16.32 15.68
Bra034558.1-P Field mustard endoplasmic reticulum, golgi, plasma membrane 16.89 15.2
Bra011433.1-P Field mustard golgi 16.7 15.08
Bra037570.1-P Field mustard plastid 18.2 14.7
Bra016419.1-P Field mustard golgi, peroxisome, plasma membrane 16.51 14.31
Bra022342.1-P Field mustard plastid 16.32 13.81
Bra017919.1-P Field mustard cytosol 20.07 10.38
Bra015632.1-P Field mustard extracellular 4.32 5.5
Protein Annotations
Gene3D:3.90.550.10MapMan:5.4.13.2EnsemblPlantsGene:Bra023678EnsemblPlants:Bra023678.1EnsemblPlants:Bra023678.1-PGO:GO:0003674
GO:GO:0003824GO:GO:0005575GO:GO:0016020GO:GO:0016021GO:GO:0016740GO:GO:0016757
InterPro:Glyco_trans_8InterPro:IPR029044UniProt:M4E4H5InterPro:Nucleotide-diphossugar_transPFAM:PF01501PANTHER:PTHR11183
PANTHER:PTHR11183:SF65SUPFAM:SSF53448SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI00025431FASEG:seg
Description
AT5G18480 (E=3e-247) PGSIP6 | PGSIP6 (PLANT GLYCOGENIN-LIKE STARCH INITIATION PROTEIN 6); transferase, transferring glycosyl groups / transferase, transferring hexosyl groups
Coordinates
chrA02:-:4500511..4502893
Molecular Weight (calculated)
60173.6 Da
IEP (calculated)
9.426
GRAVY (calculated)
0.144
Length
533 amino acids
Sequence
(BLAST)
001: MIIMVRLKAS LWLLVFSIAL LKGSFGSESS KEAYVTLLYG DEFLLGVRVL GKSIRDTGSD KDMVALVSDG VSDYSKKLLK ADGWKVEKIS LLANPNQVHP
101: TRFWGVYTKL KIFNMTDYNK VVYLDADTIV VKNIDDLFKC SKFCANLKHS ERLNSGVMVV EPSQALFNDM MRKVKTLSSY TGGDQGFLNS YYPDFQNARV
201: FDPSLTPEEL RTRPVPDMER LSTLYNADVG LYMLANKWMV DESKLHVIHY TLGPLKPWDW WTAWLVKPVD AWHSIRVKLE ETRPGTGGGK NQKDEFVVKL
301: LFLLPLCALL FCVYRSIQVH EGSSFNQFRY LYYRIRSTGT RRVSTFSTMN PSYQLHGGST QSKVPQHLGA VSVLVCFIAL LISVGTSFVI VPRQIMPWTG
401: LILVYEWTFT IFFVLFGCFL LLVHQHGKKL SVHTESSSLD DSRKGHQRGG VSCDITTLYY GLGMVFLAIA AVSLPYILGI TALFLRLGLM VGVAIILAAF
501: MTHASEQLAF RWFMRGLEDR GEASRSKSLC FIS
Best Arabidopsis Sequence Match ( AT5G18480.1 )
(BLAST)
001: MVRLKTSLWV LLLALVSIQL NGSFGSESSK VAYVTLLYGD EFLLGVRVLG KSIRDTGSTK DMVALVSDGV SDYSKKLLKA DGWKVEKISL LANPNQVHPT
101: RFWGVYTKLK IFNMTDYKKV VYLDADTIVV KNIEDLFKCS KFCANLKHSE RLNSGVMVVE PSEALFNDMM RKVKTLSSYT GGDQGFLNSY YPDFPNARVF
201: DPSVTPEVLK TRPVPAMERL STLYNADVGL YMLANKWMVD DSKLHVIHYT LGPLKPWDWW TAWLVKPVDA WHSIRVKLEE TLPGTGGGSN QHDELVVKFL
301: FLLPLCALLF CIYRSIQGRE GSLCWSSFSN QIRYLYYKVR SNGTLGYGGV STMSPSYQPH SGNAQSKVPQ HLGAVSVVVC FTAVLLSLGI SFAIVPRQIM
401: PWTGLVLVYE WTFTIFFLLF GVFLLFVHQH GKRIAIQSES SSLDDSAKVH QRAGGSCDVT TLYYGLGMAF LAIAAVSLPY ILGITALFTR LGLMVGLAII
501: LAAFMTYASE HLAVRWFLKG LEDRRDTTRS NSLCFLC
Arabidopsis Description
IPUT1Inositol phosphorylceramide glucuronosyltransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8GWB7]
SUBAcon: [golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.